BGIOSGA030049

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Revision as of 09:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030049| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030049, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030049

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030049, complete gene.

LocusTag

OSJNBA0044K01.7

Ensembl Transcript ID

BGIOSGA030049-TA

Ensembl Protein ID

BGIOSGA030049-PA

Length

3017

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6553917..6556933

Sequence Coding Region

6556905..6556933,6556667..6556763),complement(6555824..6555958,6555507..6555737),complement(6555368..6555431
,6554937..6555076),complement(6554523..6554834,6553917..6554210

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6553917..6556933 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6553917..6556933 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGGGGAGGGCTCCTCTTCCAGGAGGTGGGCGTTGGGCGATCCGGATGTCGTCGAGGTGTCGCCGGAGGCGGCGGCGGCGGCGCGTTGGAGCTCCGCGCGCCTGAAGCGGAAGCGCACGACTGTTGCTCACGAAATAATTGATCTCGACGCCAATGATGATCCTGATGGAGTTATGATAATTTGTGAGAAGGCGTCGAGTCACAAGAGTAATCATTCTGTTAGTCATCCTTCGGATTGGCCAAAGCATCCAAAGAGTGGCTTGGCTGAGGATGTTCCTGGTCCAAGCCATCAACCTGGCACGAGCACAGTTCTACCATGGGGATGCACAACTCCTGGGAGACCACGGAAGCATAAGGAAATTAAAATCGTGGATAATAAAATTGATGAGAAGTATAAGGCATTTAAGCAGTTTGATACTGTTACCGACCACAGTGATCACTATTATTCAATGTCAGGCAAAGGGAATGTTCCTGAAGTCAAGAAGCCATCCAAGGACTGGGTGAGGCGGATTCAACATGAATGGAAAGTTCTGGAGAAAGATTTGCCAGGTACAATTTTTGTACGAGTTTATGAGGATAGGATGGAACTACTTAGGGCTGTCATTGTTGGACCGGCAGGCACTCCTTACCATGATGGACTTTTCTTTTTCGATGTATATTTCCCTTCCCAGTATCCCAAGAAACCTCCACTAGTGAACTACCGCTCGGGAGGGTTGCGGCTTAATCCAAATCTCTATGATAGCGGGAAAGTCTGTCTTAGCCTATTGAACACTTGGTCTGGGCATGGGTGTGAGAAGTGGAACCCATCCAATTCAACCATGCTGCAGGTCCTAGTCTCCATTCAGGCCTTGGTGTTGAATGCGAAACCTTATTTTAATGAACCTGGTTATGCAGCTTCTGCTAACACACCCCAGGGGGAGAAAATGTCCATGGCTTATAATGAATCGACATTTCTCCTATCCTGCAGAACAATGCTGTATTCTCTTCGGAATCCACCGAAGCATTTTGAAGACTTCGCAAGGGTTCATTTTTGCAAGTACGGGCGCAATATCCTCGTAGGATGCAAGGCCTACATGAATGGTGCCCAAGTTGGATGCCTTGCAGGAAACGGAGTGCAGGATGTTGATGAAGGCGACAAAAGCTGCTCAGCGAACTTCAAAGGCTCCTTGAAGACGTTATTTGATGAACTCATCAAGGAATTTACCCGGATAGGAGTTCATTGCCATGAATTCCAGCCTCAGAGGGTGAATCCTGGGTCTACCAGAGCCAAGGCGGACACCACATTGAGGCTATGA</cdnaseq>

Protein Sequence

<aaseq>MAEGEGSSSRRWALGDPDVVEVSPEAAAAARWSSARLKRKRTTVAHEIIDLDANDDPDGVMIICEKASSHKSNHSVSHPSDWPKHPKSGLAEDVPGPSHQPGTSTVLPWGCTTPGRPRKHKEIKIVDNKIDEKYKAFKQFDTVTDHSDHYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPKHFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGNGVQDVDEGDKSCSANFKGSLKTLFDELIKEFTRIGVHCHEFQPQRVNPGSTRAKADTTLRL</aaseq>

Gene Sequence

<dnaseqindica>1..29#171..267#976..1110#1197..1427#1503..1566#1858..1997#2100..2411#2724..3017#ATGGCGGAGGGGGAGGGCTCCTCTTCCAGGTGAGCGCGCACGCTGCCCTCCCCTCCACACCCCGCGCAGCACACGCGGGCGCTCGCTGCTCGGGTCAAGTCTGATGCGTTTCTTTGTTCGTTTTGGGGGGGTTGCGATGCGATGCGATGCTGGGGGGTTTTTGGTCGCAGGAGGTGGGCGTTGGGCGATCCGGATGTCGTCGAGGTGTCGCCGGAGGCGGCGGCGGCGGCGCGTTGGAGCTCCGCGCGCCTGAAGCGGAAGCGCACGGAAGGCCTCTCTGCTCTCTTTCTTCTTCTTCTACTTTCTTTTCTTTTCTTTTTTCTTTTTTTCTTTCTTTTTTTTATTTTTGCGTCTCTGAATCTTGCAAGAGTTTGGGCTGTCTCTCGGTAGGGAGGTTCCAATACGCGCGTGTATCAGCATTGGGAAGAGGATTGGAAATGGCCTGATTCTTTTTTTTTCTTTTCTTTTGGGTGCCATAATGTGTTGTATGCCTGTTATAAAACATGGAACTTGCAGTTTGTTCATTCTTGATTGATCAATGGAAATCCAATTCTGCCATATAGATCACCGCATTGGCTTCTGTAGTGATTCCACCAAGTCTATTGTGGTGGCTGGTTGTGTTCGTGTAATTTATCTGTCAAATGACAAGATATACCCCATGCTGAATGTGGAGTCGTTGGGTGTAATCCAACTTGTAGCCATTAGGCATATCCTCTCATGAAAGTAGCAATTGTTTACTGGAAAGCCAGCACAAGTCATACATAGTTCACTTTGCATTCTGAAGTATGTTTTTGTATCCCATTTCCCTTTCTATGTGTCTTTTGATTGTTCCTGGGAATTAGTTTGTGCCACACAAGCCGTGTTACGACTTTTAAGGTCCATTTCACGAAACCCCTCCGAGAAATAACAGAGTTTCGTTATTGCAACTTTGAGTAAGATGCGAAGAATCTAATATGCTATATGTTTAATCAACAGACTGTTGCTCACGAAATAATTGATCTCGACGCCAATGATGATCCTGATGGAGTTATGATAATTTGTGAGAAGGCGTCGAGTCACAAGAGTAATCATTCTGTTAGTCATCCTTCGGATTGGCCAAAGCATCCAAAGGTTAATTCATTGGAGTGTTTTTGTTTACCATTGTTTAGTGTGCTATGCTAACAGTTGATATATCTTTCTCCATTGAGTAATTCTAGAGTGGCTTGGCTGAGGATGTTCCTGGTCCAAGCCATCAACCTGGCACGAGCACAGTTCTACCATGGGGATGCACAACTCCTGGGAGACCACGGAAGCATAAGGAAATTAAAATCGTGGATAATAAAATTGATGAGAAGTATAAGGCATTTAAGCAGTTTGATACTGTTACCGACCACAGTGATCACTATTATTCAATGTCAGGCAAAGGGAATGTTCCTGAAGTCAAGAAGGTATGAGTTTGCACGTGCACGTGCTCTATCTTCACTTCATCTCTGCAATTAAATGTAATCATTGTTTTTTGGCAGCCATCCAAGGACTGGGTGAGGCGGATTCAACATGAATGGAAAGTTCTGGAGAAAGATTTGCCAGGTAGAGCTCTCTGTTCTTTTATGGTTTATTTACTCCAGATGTTGCACATTTGATTAAGGGAGTGCTCCTTTTTTTCCCCATACTATTGTTCTTCCATTCCTCTTTCTGTACACGCACATTAGGTGAGCAAAAGCTCTAATACATGTTTACAATAAAATATGAATCCGTTTTTCATAATGCATATAATGACCTTGAGTATATTCTCTGTAACTTCTATTGGATGTAGCTGGATGTTAAAACTGAAATGCAGTAGTTCATGTCCTGACTGCATCTTTCCTCCATATTGAGCAGGTACAATTTTTGTACGAGTTTATGAGGATAGGATGGAACTACTTAGGGCTGTCATTGTTGGACCGGCAGGCACTCCTTACCATGATGGACTTTTCTTTTTCGATGTATATTTCCCTTCCCAGTATCCCAAGAAACCTCCAGTAAGGATTTGTTAATAATGTCATATGCATCCATAAAGCTTTGTTATTCCTTCTCTCTATTCTGAGCTTGCATGTGTGACATATAATTGGCTATTCTTTCAGCTAGTGAACTACCGCTCGGGAGGGTTGCGGCTTAATCCAAATCTCTATGATAGCGGGAAAGTCTGTCTTAGCCTATTGAACACTTGGTCTGGGCATGGGTGTGAGAAGTGGAACCCATCCAATTCAACCATGCTGCAGGTCCTAGTCTCCATTCAGGCCTTGGTGTTGAATGCGAAACCTTATTTTAATGAACCTGGTTATGCAGCTTCTGCTAACACACCCCAGGGGGAGAAAATGTCCATGGCTTATAATGAATCGACATTTCTCCTATCCTGCAGAACAATGCTGTATTCTCTTCGGAATCCACCGAAGGTATGACTACACTACGCTTACATGTTTTCCTTCCTATTTGTTGTGGATATATATGTTCTATTCTTTTTCGCATCCAATAATCTTTGTTGTCATTTCTGTTGATGAAGAATGCCTAATCGTTAACTGTTTCCATTGTAATGGTGTAAATAATGTGTCTGCCCGTTTGGTGAAGAAGATTAATATGCTGAATTGTTGATAAAGATGGGTGTGATGAACCTGTATTGTTTTGAATGGTCTATTTTGCTTTGCCATGCGTTGATGCCTGAGTTCCTTACATAAAGCTGCTGAATAATCCGGGTGCAACTTTTGCAGCATTTTGAAGACTTCGCAAGGGTTCATTTTTGCAAGTACGGGCGCAATATCCTCGTAGGATGCAAGGCCTACATGAATGGTGCCCAAGTTGGATGCCTTGCAGGAAACGGAGTGCAGGATGTTGATGAAGGCGACAAAAGCTGCTCAGCGAACTTCAAAGGCTCCTTGAAGACGTTATTTGATGAACTCATCAAGGAATTTACCCGGATAGGAGTTCATTGCCATGAATTCCAGCCTCAGAGGGTGAATCCTGGGTCTACCAGAGCCAAGGCGGACACCACATTGAGGCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030049