BGIOSGA030058

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Revision as of 09:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030058| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030058, complete gene.| tag = OsI_307...")
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Gene Name

BGIOSGA030058

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030058, complete gene.

LocusTag

OsI_30738

Ensembl Transcript ID

BGIOSGA030058-TA

Ensembl Protein ID

BGIOSGA030058-PA

Length

4000

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6083057..6087056

Sequence Coding Region

6086685..6087056,6085767..6086006),complement(6084425..6084499,6084256..6084286),complement(6083057..6083127

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6083057..6087056 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6083057..6087056 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGGAAACCATCAGGTCTTCCATCTTCTACCGGTGGCAAAGGCAAGGGTGTAGCAGTAGTAGGAGCTAACCCGTGGCATTCAGATGACGGCTGTGATGGAAGCAAGAGTAGCAGTGAGAGTGAGAGAACTATCACCGATGATTATTTCGGAATATTTGTGCATCCTGGTCATGGTGATCAGGAGGTGGATTCACTTAAGGCTAATCGCCATGAAGCAGATCATTCAGAAACCGATAGCGAGAGAACTGGAAGTGCTGGCTTTGGGAAGATCGCAAATAGTGCAGGCAATTCTCGCCATTTCTCAGATGTAGATTCTGGGTTGAGCCCAAAAGAAAAAAGACAGAAAAGTGAAAGGTTTCAACCTGAGAGGATTCTAAGTGGTGGCAGCGAGATGCAGACTCCAGGAGCGAATAGTTATGGAGCGAATAGTGGTCACCAGCGAGATGCAGACTCCGGGATGTTTTTGTCGTTCTCAGAGAAAACACAAGTGCAAACAAATAAGGATATTCCTGAATCATGGAAGGTTCATCCGAGAAAAGATGAGGTTGATCCAGATGGATGGGTCGTCGAGATCCATCTCCGAAATGATCAAAAGACCAAGGACAAGTATTACCGCCACAAGGATTACAATCATAAATTTCGCTCAAAGCCTGAAGTTGAATATTTTCTAAATACTGGAAAGAGATCTGCTGATGTAAGTGTTCCTAGCAGGGGTTCTGGTACGTCTGCCTCTGGAGGGAAAGGTCCAGAATCCCCCTTACAACTTCCGCATGGTTTTGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MEGKPSGLPSSTGGKGKGVAVVGANPWHSDDGCDGSKSSSESERTITDDYFGIFVHPGHGDQEVDSLKANRHEADHSETDSERTGSAGFGKIANSAGNSRHFSDVDSGLSPKEKRQKSERFQPERILSGGSEMQTPGANSYGANSGHQRDADSGMFLSFSEKTQVQTNKDIPESWKVHPRKDEVDPDGWVVEIHLRNDQKTKDKYYRHKDYNHKFRSKPEVEYFLNTGKRSADVSVPSRGSGTSASGGKGPESPLQLPHGFV</aaseq>

Gene Sequence

<dnaseqindica>1..372#1051..1290#2558..2632#2771..2801#3930..4000#ATGGAGGGGAAACCATCAGGTCTTCCATCTTCTACCGGTGGCAAAGGCAAGGGTGTAGCAGTAGTAGGAGCTAACCCGTGGCATTCAGATGACGGCTGTGATGGAAGCAAGAGTAGCAGTGAGAGTGAGAGAACTATCACCGATGATTATTTCGGAATATTTGTGCATCCTGGTCATGGTGATCAGGAGGTGGATTCACTTAAGGCTAATCGCCATGAAGCAGATCATTCAGAAACCGATAGCGAGAGAACTGGAAGTGCTGGCTTTGGGAAGATCGCAAATAGTGCAGGCAATTCTCGCCATTTCTCAGATGTAGATTCTGGGTTGAGCCCAAAAGAAAAAAGACAGAAAAGTGAAAGGTTTCAACCTGAGGTTCGTGAATTCCTGACATATCCTGATTTTTTTTTGTGTGTGTCCATGATCTTTTTATAGTTCATCAAACAAAAGGAATTGCAATGCATTAGTTCTGATGAGAATATCAAACAAATGGTGCTTTATCTCAGTTATTCTCGCAATCCAGTTCAATGTGATCTCCTGGGATTTTTTTCTTTTACTAGAAATGATCATATCAGTTCAGGTTCAGCCATAGCGGCAAGCAAAACAGAAGTAAGAAAAGCAGAAAGGCTAGCTACACTGGCTTTAAACTGGGACATCACCAGCTATTACAGCCCATTAGCTACACAAAAGTACTAGACATAGAAGCAAATCTCCTGGGAAATAAGCTACTCTAATCTATTAATTTTGATTTCACTTTTTCTCTAAAACTAACACGACATGATTATGCTCCGTGGCTTTTTTTTTTTTACTTCCCTGATTATTTCTGTTAAACTGTCCTGCAATCTGACATCTATTTCAACATCTTTATTACATATGTAAATATAGAAAAGATACAATTGATGAAATTTCTAGAAAATCATATGCACTCAGGTGTAGAGCAGCACAGTGATGTTTGAGCCATATATTTCCTATGACATTAATTAATTTAAAACATTCACGAAACCTTGTATTGAAGGACGGTTGATGACTCTCACTATCGTTATATACTTTCAGAGGATTCTAAGTGGTGGCAGCGAGATGCAGACTCCAGGAGCGAATAGTTATGGAGCGAATAGTGGTCACCAGCGAGATGCAGACTCCGGGATGTTTTTGTCGTTCTCAGAGAAAACACAAGTGCAAACAAATAAGGATATTCCTGAATCATGGAAGGTTCATCCGAGAAAAGATGAGGTTGATCCAGATGGATGGGTCGTCGAGATCCATCTCCGAAATGATCAAAAGACCAAGGACAAGGTTTGTGAATTCATGTTATATGTTGATCGATTATATTTGTTCCATGAATTTTTATGATTGATTAAAAGAGTTACATGTATTCTTTCCCAATTTTATGAGCATATCATGAAAGAAGTTTTTTTTAATATGTGCTTCGTTAGGGTGGATATCATTGTTTTGGAGAAAGATAACCAGCCCTATCATAAATATAACAAGTAGTTATATCTTAGCAGCATCAACATTTCTGAAAGTCTTGGTGATTGTACACATGAAATAGAAATCTTAGAGATCGGCTGAAAAAGATAAAATGTACAAGAGTTTTTGACATAAAGATCTCCTTTGGGTGTTATATCTATTATTTATTTCTTTGTATTAAACCAAACATGTGTACACTTTTAAAACATTTGTACTTTGTATATCTACAGTATAAAACATGAAACATGGAATAGTTCAAATCCAAACAGGTTTAGTGTTTAAACAACTCTTGCTTCCACATTTAGTAGTTCATTAAATCTGAAGGTTAAGTTCTATCTTGTCTAGCAAAAACACTTGTTATGCTACAGTTCAATCATGGTAATTAACTACTTGCGTTGATAGCATATATCTGGTGGGATATGATCATATCTGGCCAATATATTACATTGAACCATGGGAATGCATAGTTCTTTACCTAGTAATGACTTGTGGCAGGATTGAGTGGTTTGTAAAATTTCATTCCTTTTTAATACATATTCTTGTTTATATGACATGATAATTTGTGTGGAGTGAAAAAAGAGTTCTATCACATATGGAGTGTTCACAATCTGTGTTATAATACTCAACGAAAACATAGGTGTCATTTTATGAAAAGTAATATGTACAAATTAAACCAAACAATTTTATGATAGCTACCTTTAGTATAATTGGCATACAGAAATTATATTTGACTTTTATTTTTCATATAATAACTATCAAAACAAAGTATGTTGCACAACAATAATATATCTTCTTGCTAATTCATTAATCTCACTTATCAGTTCTAACAATATGAAAAGCCAGAACATCACAAATTTAATTTGGATCAAAACCTCTATACTGTGAATCATTAATTGCACCTAGCTTTGGATGCCTAGCTAGGGTCATACATGTGATGCAATGGCAATATAAGTTTTTCCCTCCCATCCCCTTCCAATCAAAGAGAAAAGAAAACAAAAATGCAGGTTGGATTTTGCTGAAATATACTTGCTTATACTAAATTTATTTTGTTGTTCATATGTTAAATGAAATTGACTTTTTTCTTATTTCGCAGTATTACCGCCACAAGGATTACAATCATAAATTTCGCTCAAAGCCTGAAGTTGAATATTTTCTAAATACTGGAAAGGTTATAAACCGTAAAGTTCCATGTATTCTACAGAAGGTGCCCTACTACAACAGAGTTGATTTCAAATACTGTATTCTATTTCTACATAATTTCTCTTTCCAAATTTGATACTGATTCTCATACATTGTGTCTGCACAGAGATCTGCTGATGTAAGTGTTCCTAGCAGGGGTAAGATATCATCAAACTGTGCACCTTGGAATTAGGAATACCATTTCATTTTTACTAATCATTGAATTTGGCGAATATGAGTTGTGTTTTAGATGAATTATATACTGGTAGACCTGCAGTATGATTAAAATATATATTTGATTGAACTGGATCAGTACTATTGACAGAAACAATAAATAGAAAAAAATACATATTACAATATTTATTTTTATATATCTACATATGTACAATCATGATATTTTAGATTATGTTCATCTTGCTAACTTGTATATATTTTCAAAAATTTAAGCAATTTCACAGTCTCTGAGGAGGTACCATGAGGTACCATTTTTTCTATTGTAAATTTAGTACTTTTTAGTATTATGTACTATGAGGTACCAAATTTTACACTAAATTTTTTGTACCATGGTACCTCCTCAAGTACTGTAAAATTGCTCCAAAAATTTCGTCACTGCTAAGGAGAAACGATGCTCACTTAATCGGACTGCTATGACATGTGCACACAGGTCGCGGTCGTGGCAGACCTCGTACAACAAGGACGATGACCCTAAATTCAGGTAATGTGCTTTTGATAACAGAATTTTGCATTGTTGTTTTTTCTTAAAATATATTTACTACTCATTGTTAGCTCTGGATAGTGAATCAGAATGATATATTTTCATTTTATTCCATGAAACTTGCGTAACATAAAATGTGGCCCAAAGTGAAATTTCACTCTTTAAACAAAAACAAGATGAAACTATTTTTAACCAGCTGCAAGTGGTTGAACGATTACGTGGGTTCACCGGCGGATCTCACATCACTAGGATGATTTGTATTTCCTGTGTTGAGCAATGTCTAAAATCGTTTAAGCCTGTGTTTGGTCCACCTCTAAGTTGTTGCACTGGCAACTAATTCTGAAAAGACCAGTGTTCTACCTTTGTGACATGTGTGCTTCTTTAATTATTGATGTTTTGCGATAAAGAATCTTCTTTTGGCAAGCAACGATTTATTAGATCAATATATATTGTTATATAATTGATTGTTGCACTGTTTCATTTCAAAATATTGCAGGCCTATATAGTTTGTTTCAGAAAAGATTTATATTCTTGTTCACCAATTAAATATGTTTGTTTCTTTTTTACACAGGTTCTGGTACGTCTGCCTCTGGAGGGAAAGGTCCAGAATCCCCCTTACAACTTCCGCATGGTTTTGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030058