Os10g0548700

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0548700| Description = Protein kinase domain containing protein| Version = NM_001071838.1 GI:115483271 GeneID:4349302| Length = 5158 bp| D...")
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Gene Name

Os10g0548700

Description

Protein kinase domain containing protein

Version

NM_001071838.1 GI:115483271 GeneID:4349302

Length

5158 bp

Definition

Oryza sativa Japonica Group Os10g0548700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21922890..21928047

Sequence Coding Region

21923174..21923374,21924079..21924843,21924930..21925478,21925552..21925692,21925768..21926179
,21926354..21926458,21926542..21926663,21926746..21926867,21927689..21927971

Expression

GEO Profiles:Os10g0548700

Genome Context

<gbrowseImage1> name=NC_008403:21922890..21928047 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21922890..21928047 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctcgaggggcggcgacgccgacgcgtgggagacggcgagcgcgcggagcggcgtctcctcctcctcctccggccgcgcgacggccgcggcggcggcgccggcgccggagaacaaggtgttcgtggctctcccggcgcagcacaagagcggcaggtccacgctcgcgtgggcgctccggcacgtcgccgaactggctccggcggcgatcggcggcggcggcgaggtggtggtggtggcggcgcacgtccactcgccggcgcagatgattccgatgagcatgggaggcaagttccatgcaagtaaattgagaccggaacaggtcagtacttacagaaaatatgaaagggagcaggtggagaagaatttggatgaatacctcgagcaatgcacaaaaatgaaggtcaaatgtgagaaaattgttattgagaatgaagacattgctaatgggattacagagcttattttgctgcatggggtaagtaaactcgtcatgggagcagctgctgacaagcaatactccaggaaaatgaaattgcccaagtccaaaacagcactctcagtcacggttaaagcaaatccttcatgcaagatttggtttgtttgcaaggagcatctgatatacactagagattttgttgctcctatttctccaaattcacaatcacctgacactatcagaggctcaatatccaatctagctgcacggggaggaactacaaaccaatatgcaaacaatgcagttaacggttacgtacagaggtccatgtctgaaatggttgtccctgcatctagcagggtatcattgcaactgcattctcgatcatcgttacaggagtcccttagcaggctaaacatggagggcacctctgttgattcctgggatagcttccgcagaggaagctttccaagttcataccgagcttcttctactgtgactgaagaagtgttgagcgattctagttcatctggaatacctagagatggcatctcaacacttgcaggttgtgactttccaaactcagcactgcaccatgaacagggtgacgcaggttcaaatgctaacctatttgataaacttgaagaagccttcgcagaggctgagaagtataggaagcaagcatatgatgagtcactgagaagacaaaagacagaagaagaattgatttcatatcaccaaaaggccaggaaatctgaggatttgttcttaaatgaggccaagcaaaggaaagaggttgaggaaaccctagcaaaggcaaatgtggagatacaattattgaaggaagaaatggatgcactgaaacacaaccgagatgacctcagcagtaagctttccgacgtgagtgaacagaaagtgacactagagcaacaggccgtggaatatggaagcattatcattgatctcaaggatacagttgcagcaagccaagccctcattgattcaatgcaaatggagtttgaacaattgaagcatgaaagagacaatgcactcaaacatgcagaagagctgcacagagagaaacaaaacatggtatcgagctcagacttggaatggagcactgaattctctttgttggagctgcagcaggcaacacaaaatttcagtgatgcaatgaaaattggagaaggtgggtttgggtgtgtctacaggggtcagcttcgtaacaccactgttgcaattaagatgcttcgctctcagaacttgcaagggcagtcacagtttcagcaagaggttgctgttcttagtagagtaaggcatccaaaccttgtaactcttgtaggttattgctcagaagcttcaggtcttgtgtatgaattcttaccaaatggaagccttgaagaccatctagcctgtgaaagcaacacgtctccgcttacatggcagatccgtacacggatcatcggtgagatatgttcggcgctcatcttccttcactctgacaagcctcacgcagtcatccatggtgatctcaagccagcaaacattcttcttgatgcaaatttggtcagtaagcttggtgactttggaatctctcgcctcctaaataggtctagcacagtgtccacgagcttctaccaaacaacaaatccaaggggaacttttgcttacatggaccctgaatttcttacaactggggaactaacagcacggtctgacatatactcatttggcattatcatactgcgactggtgactgggaagccagctttaggcattgcaagggaggtggaggttgcacttgataagggtgagttggagttgcttgttgaccgatctgctggagactggccgtttgtgcaggctgagaagctgatgcttcttggcctgcagtgtgcagagcttagcagaaggaagcgccctgatcgtatgaatcatgtgtggagcgtggtcgaaccccttgtaaagtctgcttcgctgccagtagaaccagaatccattggacattgggtgaataagaaccgcacgccattctacttcatatgcccaatttctcaggaggtcatgagggatcctcacattgcagcagatgggttcagttacgaagaggaggccatcaaaggatggctcggcagcgggcacaacacctccccgatgacaaaatcaactctggaacatcttcagctgatcccgaatctcgctcttcgttctgccattgaggaatttatgcagcagaagcagcagcagattccatcatag</cdnaseq>

Protein Sequence

<aaseq>MGSRGGDADAWETASARSGVSSSSSGRATAAAAAPAPENKVFVA LPAQHKSGRSTLAWALRHVAELAPAAIGGGGEVVVVAAHVHSPAQMIPMSMGGKFHAS KLRPEQVSTYRKYEREQVEKNLDEYLEQCTKMKVKCEKIVIENEDIANGITELILLHG VSKLVMGAAADKQYSRKMKLPKSKTALSVTVKANPSCKIWFVCKEHLIYTRDFVAPIS PNSQSPDTIRGSISNLAARGGTTNQYANNAVNGYVQRSMSEMVVPASSRVSLQLHSRS SLQESLSRLNMEGTSVDSWDSFRRGSFPSSYRASSTVTEEVLSDSSSSGIPRDGISTL AGCDFPNSALHHEQGDAGSNANLFDKLEEAFAEAEKYRKQAYDESLRRQKTEEELISY HQKARKSEDLFLNEAKQRKEVEETLAKANVEIQLLKEEMDALKHNRDDLSSKLSDVSE QKVTLEQQAVEYGSIIIDLKDTVAASQALIDSMQMEFEQLKHERDNALKHAEELHREK QNMVSSSDLEWSTEFSLLELQQATQNFSDAMKIGEGGFGCVYRGQLRNTTVAIKMLRS QNLQGQSQFQQEVAVLSRVRHPNLVTLVGYCSEASGLVYEFLPNGSLEDHLACESNTS PLTWQIRTRIIGEICSALIFLHSDKPHAVIHGDLKPANILLDANLVSKLGDFGISRLL NRSSTVSTSFYQTTNPRGTFAYMDPEFLTTGELTARSDIYSFGIIILRLVTGKPALGI AREVEVALDKGELELLVDRSAGDWPFVQAEKLMLLGLQCAELSRRKRPDRMNHVWSVV EPLVKSASLPVEPESIGHWVNKNRTPFYFICPISQEVMRDPHIAADGFSYEEEAIKGW LGSGHNTSPMTKSTLEHLQLIPNLALRSAIEEFMQQKQQQIPS</aaseq>

Gene Sequence

<dnaseqindica>4674..4874#3205..3969#2570..3118#2356..2496#1869..2280#1590..1694#1385..1506#1181..1302#77..359#gcgagggagttagtttagttagttaatcagttgggaacacacacgtcggccgtctcgtctcgcgccattttttttgatgggctcgaggggcggcgacgccgacgcgtgggagacggcgagcgcgcggagcggcgtctcctcctcctcctccggccgcgcgacggccgcggcggcggcgccggcgccggagaacaaggtgttcgtggctctcccggcgcagcacaagagcggcaggtccacgctcgcgtgggcgctccggcacgtcgccgaactggctccggcggcgatcggcggcggcggcgaggtggtggtggtggcggcgcacgtccactcgccggcgcagatgattccgatgagcagtacgtgtgtcctcccgcttcttcgccttctctcgtcgtcgctctgcaaacccccacgccacaagctgcagggcttatatcagccgttcgattagctatgtacggtcaggattcagacggccctgattggctgatgcattttttgtgaggaagcccctgtagtttttacgtattccattctgatgcatttttgtgaggaagcccctgtatttttttcgtattctattctgaactcctttttagttcactactgagtcccagtcctgaatcccccaatgcggcgccccctgcctcgccggggacggcggcgaggggtgtcgcgacgggagctcactccggcgacggcgagcatcttcgcgcgcacaattatcccgaggatgtggctgggctaggatcgtgcagagattcccgcttccttttggtccaaatgcgactgggttttagccttttagggcaaaggggaagtattatttcctactgagttgttcatcgattcgcttgtctgaattgccaaaattgtttagtgtctaggtgattgtattcggttttttttttcaaactcttaatgcgaactgataatttctagtattggtgcccatggatgcacgctgagtcagttcagaatagaactgaagtagtggtcagtctcagtccacagttcacagtaaatattcattttagaagaacaaatcgcgtgaaggttgattagatgttgacctcatgtgttaaatttcagctaaatctgctattgcaacttcaaatgacatactttgttcgcgtggtgtactaattactaaacaactcatctaattacatggtagtgggaggcaagttccatgcaagtaaattgagaccggaacaggtcagtacttacagaaaatatgaaagggagcaggtggagaagaatttggatgaatacctcgagcaatgcacaaaaatgaaggttcaggcaatcttctcattcattcttagtaatgaagtctgaattgctatggggaacaagttaagtgtattatatttttcaggtcaaatgtgagaaaattgttattgagaatgaagacattgctaatgggattacagagcttattttgctgcatggggtaagtaaactcgtcatgggagcagctgctgacaagcaatactccaggtgtgtcttcatttctgctaccgatttgtacttttgttgcatcatatatctagctaagtgatgcctcaaaactctaatttcaggaaaatgaaattgcccaagtccaaaacagcactctcagtcacggttaaagcaaatccttcatgcaagatttggtttgtttgcaaggagcatctgatatacactaggtattaagaatatgatcatgagcagtatgcatgccatacctctggaccgaccagtcatctgtatattcatttcataccgacttcatatattgtttcctagatactagccattctgttagtgttctcccttttccaaaatcattttgagtaattctctctttaaactgtgttcagagattttgttgctcctatttctccaaattcacaatcacctgacactatcagaggctcaatatccaatctagctgcacggggaggaactacaaaccaatatgcaaacaatgcagttaacggttacgtacagaggtccatgtctgaaatggttgtccctgcatctagcagggtatcattgcaactgcattctcgatcatcgttacaggagtcccttagcaggctaaacatggagggcacctctgttgattcctgggatagcttccgcagaggaagctttccaagttcataccgagcttcttctactgtgactgaagaagtgttgagcgattctagttcatctggaatacctagagatggcatctcaacacttgcaggttgtgactttccaaactcagcactgcaccatgaacaggtaagctctaataccaaatttaagctttggatgattagctaggaatcttattccattacatggtgctgtatccagggtgacgcaggttcaaatgctaacctatttgataaacttgaagaagccttcgcagaggctgagaagtataggaagcaagcatatgatgagtcactgagaagacaaaagacagaagaagaattgatttcatatcaccaaaaggtaaacccttcactaagttagcataaaaaattgcaggtttttttacacaaagatctaatggacctggttacaggccaggaaatctgaggatttgttcttaaatgaggccaagcaaaggaaagaggttgaggaaaccctagcaaaggcaaatgtggagatacaattattgaaggaagaaatggatgcactgaaacacaaccgagatgacctcagcagtaagctttccgacgtgagtgaacagaaagtgacactagagcaacaggccgtggaatatggaagcattatcattgatctcaaggatacagttgcagcaagccaagccctcattgattcaatgcaaatggagtttgaacaattgaagcatgaaagagacaatgcactcaaacatgcagaagagctgcacagagagaaacaaaacatggtatcgagctcagacttggaatggagcactgaattctctttgttggagctgcagcaggcaacacaaaatttcagtgatgcaatgaaaattggagaaggtgggtttgggtgtgtctacaggggtcagcttcgtaacaccactgttgcaattaagatgcttcgctctcagaacttgcaagggcagtcacagtttcagcaagaggtaatagattaatagcaactctgaaaccataattgcaaattgattttgtattgctttagttgtactaaactaatgttactgggcaggttgctgttcttagtagagtaaggcatccaaaccttgtaactcttgtaggttattgctcagaagcttcaggtcttgtgtatgaattcttaccaaatggaagccttgaagaccatctagcctgtgaaagcaacacgtctccgcttacatggcagatccgtacacggatcatcggtgagatatgttcggcgctcatcttccttcactctgacaagcctcacgcagtcatccatggtgatctcaagccagcaaacattcttcttgatgcaaatttggtcagtaagcttggtgactttggaatctctcgcctcctaaataggtctagcacagtgtccacgagcttctaccaaacaacaaatccaaggggaacttttgcttacatggaccctgaatttcttacaactggggaactaacagcacggtctgacatatactcatttggcattatcatactgcgactggtgactgggaagccagctttaggcattgcaagggaggtggaggttgcacttgataagggtgagttggagttgcttgttgaccgatctgctggagactggccgtttgtgcaggctgagaagctgatgcttcttggcctgcagtgtgcagagcttagcagaaggaagcgccctgatcgtatgaatcatgtgtggagcgtggtcgaaccccttgtaaagtctgcttcgctgccagtagaaccagaatccattggacattgggtgaataagaaccgcacgccattctacttcatatgcccaatttctcaggtatgcatgtccaacctctccgcggtgcagtaaataacatgtcatagactcatagttgcattcacgataactgggattacaaatgtggtaagcaaaagctgtggatgttttgcttctttattgcaatcgagtatgatggaagcacaacaccatccatgtttctcagtacttggctgtgaacatccgtttggatgtagaggccggtttaatccattatctaaaagcaaatgtttctcagaactatccaaaagttattgtgttggcggttctgtgtatagtacgactgaatttaactttgatatttttagacttatggcatgttagtttagaaatacagcatctcgtgcttaaaaatcacccatgttcaaggcttaaagatactaggagctatctctgttctaaaacaagttctggttttaccgagagttgcttccttgagaactgttgccacacttaatgagggacagagatcggaacttctttctgagggaaaatatgaatgttaacaagtgtgcatgctttgatctctcagattttattgttgttctggaactattttttttttctgatataactttctgaataattatattatgcttgctgaagtagaatattaaagttccttgcagcattttttggtggggaataataatatgctactaacagtctaacagctgctgagcttggttgaaacaatattgtaggaggtcatgagggatcctcacattgcagcagatgggttcagttacgaagaggaggccatcaaaggatggctcggcagcgggcacaacacctccccgatgacaaaatcaactctggaacatcttcagctgatcccgaatctcgctcttcgttctgccattgaggaatttatgcagcagaagcagcagcagattccatcatagtaattagttcagtgaacttgattattcttagcttcataagttgtaaagttgatagctcattctttgttcagaagtctgctcgtgtagtgtagctgttttgttttgtgagcagcaacttacaataaatcgtgcatgctcatatgagcaggtgatgatcagctagcaaatgtttgatgtcagattgtgcttgaacataattgtttcaggccacttagaatcatgggacttatcagtttactgttgttggaaattggtaaaaatgaatatggagatgattttttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0548700, RefSeq:Os10g0548700