BGIOSGA030092

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Revision as of 09:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030092| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030092, complete gene.| tag = OS09G02...")
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Gene Name

BGIOSGA030092

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030092, complete gene.

LocusTag

OS09G0278300

Ensembl Transcript ID

BGIOSGA030092-TA

Ensembl Protein ID

BGIOSGA030092-PA

Length

3732

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5244517..5248248

Sequence Coding Region

5248050..5248248,5247272..5247943),complement(5246959..5247136,5246716..5246860),complement(5246527..5246616
,5246269..5246418),complement(5244722..5245483,5244517..5244639

Genome Context

<gbrowseImage1> name=IndicaChromosome09:5244517..5248248 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:5244517..5248248 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGGGGTCGATGATGGCCTTATCTGTAGTACTTCTTGCTATAAGATGTGTGGCCATGCTGATAAATCTTCAATAATTGATGGTGAGATTGGTTGGCCGAGCATGGAAATAAGCCCTTGCAGCACTCCTTATGGCACTCCTCTTTTTAGCCGAGAAAGTTCTTGTTCAAGCTTTGCCAGTTGCTTTTCAAGCCTCGATGACTACCTAGTTGAAACTGACTCTGAAGAGGAAATTGAGGTCTTAGATACTGGCCAACTTCATCCCGGGATCTTATTCTCTGATGAATCGATGGAGCAAAGAAAAGCGGATTCTGTACAGGTGGAAGAATATCAAGTCAGTCATTCTGCTGTTGTTAACGATGATTCTAGTATTTCCATTCCGACAAACCAGAATAATTCATCTGGTCAACTGCAGTTGGAGATACATCTTGATGCCACCAATGAAAAATCTGTTCCATCCAATGCTATTTTGGATGCAAATGTAACAGATCCTCATCAAGAGGTCATTTCCAATGGTGGACTTATAGAAGCATGTTATGGTGTACCAGTGGATGATATTGATCTCAAACAATCCAATATCTTAGATGGTGAAGAGATTACTAGCCTTCCTATGGCCGACAATGAAATGACTCCACTGGATGATATGAAGGAAATTAGTAGTATAGTTTACAACAGTACAATAAGCGTTGAGCAGCATGTGAATTCGGGTTCAGAGTTTGAGAAAGGAAATGAATCCAGTGATAAACTTTACCCGCTAGTAATGCCCAGTTTTGATACAGACCCTCACATTTGGTTACCACCAGACCCAGTCAATAAGGACGATGACACTGATATTGTTGCTAATAATGATGATAATAGTGACAACAATGCTGCTGAAGGGCTCTCTTTGTCTGATGGAGAAGCTGACAAGAACTGGCTTGATATCGTTGCTTCATTATCATGGCGTACTGCATTACTTGTCAAGCCTGATGCCAATGTTGGAAATGCAATGGATCCTTGTATGTATGTTAAGGTGAAATGCATAGCTTCAGGATCTATCGAGCAAAGTGAAGTCATCAACGGTCTTGTTTTTAAGAAGAGCGCTGCTCATAAGCAGATGCGTGCCAACATGAAGAATCCTAGACTGTTACTTCTGCAGGGTGTTGTTGGTCATTCTTCTGCAGGGCTATTGTCAATGGATTCAATGAAACAGGAAAACTATCACTTGGAGAAAATTCTCAGTGATGTAATTATCAAATGCAAACCTGATGCTATATTGGTGGAGAAAGCAGTCTCACGAAATAATGTTCTTGCAACACCCAACCTTATTAAACAGTGCGAGTCTCTCCATTTTGAAAAGTTTATTGAGGAGCATAATATAACTGGAGGAGGAAAGAGGTCAGCCAAAACTTTGTTATTTCTAGAAGGTTTTCGAAAGCCTTTGGGATGCACGATTTTACTGAAAGGATCAACAAGTGAAGAACTGAAGAAAGTTAAGCGTGTTCTTCATTTCACTGTTTTTGCAGCTTATCATTTGATCCTTGAAACTTCATTCTTTGCTGATCAAAGGTTATTTGCAACGGGAAAAAATGCCATGGAGAAAGGCAACTGTTTGAAAACTGATCTGCAGCTGCTTGTTCCTTGTACTGCTGCTCCATCCTCCAAAATCTGTTCTGATATTGCACAAAATAGTGACCCCACACAACAGGCTTTGAACAGTCTTGCTTCGGATGGAGAGTATGTTAATCAGGATGATTTTGTTGATCCAGAGAAATCCGTGTGCATGCACGATTCCAAAATTGAAACATCTAGAGAGTATGCGGACAGAAAACTTGATGACAGCAACAACATTCAGTCATATTCATCATTGCCAGTTCCTGACCCCTCGAGAAATCTTATTGGCGATATATCATTAGATTTTGCCAAATTGACATCATGTGATGACTTTGCTGGTTCCACCTCTGGAGCTCCTTCAAACAATGTGGTTTTGCAGATGAATGGGGCGGATGGCAAAGATTGTCTAGAAGCTATTAGTGATGGAATATCTACAGAGACTAGGACTTCTTTAGATTCTCAGAACATATTGATTTCGATGTCTAGCCAACATATCAGAAACCAAGCAATCTGTGAGCAGAGTCATCTTTCCCGCATAACTTACTACGGGTATTTTGATACATCAGTTGGTCGTTATTTGCAAGATAGTTTACTTAATGAGAAACACAGCTGCTTATCTTGTGGTGAACCCCCAGAAGCTCACATGTACTCTTACACCCACCACAATGGCACTCTTAACTGTTCTTGTGAAAAGCCTCCCCTTGGATGTAACTCTTTCTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MDGVDDGLICSTSCYKMCGHADKSSIIDGEIGWPSMEISPCSTPYGTPLFSRESSCSSFASCFSSLDDYLVETDSEEEIEVLDTGQLHPGILFSDESMEQRKADSVQVEEYQVSHSAVVNDDSSISIPTNQNNSSGQLQLEIHLDATNEKSVPSNAILDANVTDPHQEVISNGGLIEACYGVPVDDIDLKQSNILDGEEITSLPMADNEMTPLDDMKEISSIVYNSTISVEQHVNSGSEFEKGNESSDKLYPLVMPSFDTDPHIWLPPDPVNKDDDTDIVANNDDNSDNNAAEGLSLSDGEADKNWLDIVASLSWRTALLVKPDANVGNAMDPCMYVKVKCIASGSIEQSEVINGLVFKKSAAHKQMRANMKNPRLLLLQGVVGHSSAGLLSMDSMKQENYHLEKILSDVIIKCKPDAILVEKAVSRNNVLATPNLIKQCESLHFEKFIEEHNITGGGKRSAKTLLFLEGFRKPLGCTILLKGSTSEELKKVKRVLHFTVFAAYHLILETSFFADQRLFATGKNAMEKGNCLKTDLQLLVPCTAAPSSKICSDIAQNSDPTQQALNSLASDGEYVNQDDFVDPEKSVCMHDSKIETSREYADRKLDDSNNIQSYSSLPVPDPSRNLIGDISLDFAKLTSCDDFAGSTSGAPSNNVVLQMNGADGKDCLEAISDGISTETRTSLDSQNILISMSSQHIRNQAICEQSHLSRITYYGYFDTSVGRYLQDSLLNEKHSCLSCGEPPEAHMYSYTHHNGTLNCSCEKPPLGCNSFW</aaseq>

Gene Sequence

<dnaseqindica>1..199#306..977#1113..1290#1389..1533#1633..1722#1831..1980#2766..3527#3610..3732#ATGGATGGGGTCGATGATGGCCTTATCTGTAGTACTTCTTGCTATAAGATGTGTGGCCATGCTGATAAATCTTCAATAATTGATGGTGAGATTGGTTGGCCGAGCATGGAAATAAGCCCTTGCAGCACTCCTTATGGCACTCCTCTTTTTAGCCGAGAAAGTTCTTGTTCAAGCTTTGCCAGTTGCTTTTCAAGCCTCGGTGAGTGTTTTTGCACTGTTCTCCTGTAGATGAAATGCTGTCATTGCTATCATTTGCGATTTTTTTGCTAGCATAACTAACATTTTTTATGCCATTTATTTCCTAGATGACTACCTAGTTGAAACTGACTCTGAAGAGGAAATTGAGGTCTTAGATACTGGCCAACTTCATCCCGGGATCTTATTCTCTGATGAATCGATGGAGCAAAGAAAAGCGGATTCTGTACAGGTGGAAGAATATCAAGTCAGTCATTCTGCTGTTGTTAACGATGATTCTAGTATTTCCATTCCGACAAACCAGAATAATTCATCTGGTCAACTGCAGTTGGAGATACATCTTGATGCCACCAATGAAAAATCTGTTCCATCCAATGCTATTTTGGATGCAAATGTAACAGATCCTCATCAAGAGGTCATTTCCAATGGTGGACTTATAGAAGCATGTTATGGTGTACCAGTGGATGATATTGATCTCAAACAATCCAATATCTTAGATGGTGAAGAGATTACTAGCCTTCCTATGGCCGACAATGAAATGACTCCACTGGATGATATGAAGGAAATTAGTAGTATAGTTTACAACAGTACAATAAGCGTTGAGCAGCATGTGAATTCGGGTTCAGAGTTTGAGAAAGGAAATGAATCCAGTGATAAACTTTACCCGCTAGTAATGCCCAGTTTTGATACAGACCCTCACATTTGGTTACCACCAGACCCAGTCAATAAGGACGATGACACTGATATTGTTGCTAATAATGATGATAATAGTGACAACAATGGTAATTGGGTACAGTCAAGTTTCAATATTAGCTTTGATGCAAAGAGAAACAAGAGTAGTTGTGAAGACCAATAGCTGAAAGCAATGTCGGAAGTTATGAATGGGCAATTCAAGATTCTTGTTACTCGTTTTTTAGCTGCTGAAGGGCTCTCTTTGTCTGATGGAGAAGCTGACAAGAACTGGCTTGATATCGTTGCTTCATTATCATGGCGTACTGCATTACTTGTCAAGCCTGATGCCAATGTTGGAAATGCAATGGATCCTTGTATGTATGTTAAGGTGAAATGCATAGCTTCAGGATCTATCGAGCAAAGGTAACTTACCAACATTCTTCCTCATTTTGCTTTTTTTCTTTGCTTAGTCATGTACACATGCCATAACTAGCTCCCTTTTATATCTTTTTTTTTGACAGTGAAGTCATCAACGGTCTTGTTTTTAAGAAGAGCGCTGCTCATAAGCAGATGCGTGCCAACATGAAGAATCCTAGACTGTTACTTCTGCAGGGTGTTGTTGGTCATTCTTCTGCAGGGCTATTGTCAATGGATTCAATGAAACAGGTGTGCATGTATGCCCTTAGTAGAGCATATTTACATTATGTAGAGAGTTATGCCATATGACATAACATATACAAATTTCTTTTCATTGTCATTGATCAGGAAAACTATCACTTGGAGAAAATTCTCAGTGATGTAATTATCAAATGCAAACCTGATGCTATATTGGTGGAGAAAGCAGTCTCACGAAATGTAAATGAATATATTCATAAACAAGGAGTCACTGTAGTTAGTGACATGAATATCCGTCGGCTGGAAAGAATTGCTCGTTGCACTGGTTCTCCAATTCTCTTGTTGCAGAATGTTCTTGCAACACCCAACCTTATTAAACAGTGCGAGTCTCTCCATTTTGAAAAGTTTATTGAGGAGCATAATATAACTGGAGGAGGAAAGAGGTCAGCCAAAACTTTGTTATTTCTAGAAGGTTTTCGAAAGCCTTTGGGATGCACGGTATGTTGTTTTCCTATCTTGTTTTTAGTTTGTAGGTCATCTTTTCTCTTTATGTAGGACTGATCTTCTCATGACTGGGTCAGAGTTGTTCTTTCTCTGATCCCTTGAGCTGCATTTAGTATATTTTTTCAGTATATTATTTATATTACATAGGTTAGCCTTCTATGATAAATAATTTTTTTCTGCCATCTTTTTTGACAAACTGATATATATAATTATAAAATATAATCCTGACCATTTGGAATCAACAAAAATATAGTATTAATTAATTTTGAAGCTAATGAATTTCCTTATTGCAGGCTTGACATCATGATTTAGACTGAAATGCATTGAATCAGATAATATAATCTTCATTGTTGGGGTTCTGAATCAGAATCTTACCTTGCATTTGTCTGTGTTATTTAGTGAAATTATGTTGATAGAACAAACCAATTAGCTTTTTAAATATACTTTTCCACCATGACATTAGAGCTTCACACCTTGTTACCAGCTTAACATTGGATTATATCCTAAAGATGTATTAGTACAGAAATTGGGACAAACTTTCACAGTTAGGATTGAGTTGCTCATATTGATATTGATTATAATATTTCTTTTTGAAGAAAAAATAACTTTGATTTGTGCGACAATGCTAGCTAATAGCTATATATCATCCAAATTTCTTTTAGGGGCTTTATATGTTATGCACAAATGCATAAGCTATGAATTGTTACACCTTTGATGCACTAAACCATTTGTGTTAGTGAATTGAAGCAAAATCTGATCAGCTTGAAACTATTTTGTAGATTTTACTGAAAGGATCAACAAGTGAAGAACTGAAGAAAGTTAAGCGTGTTCTTCATTTCACTGTTTTTGCAGCTTATCATTTGATCCTTGAAACTTCATTCTTTGCTGATCAAAGGTTATTTGCAACGGGAAAAAATGCCATGGAGAAAGGCAACTGTTTGAAAACTGATCTGCAGCTGCTTGTTCCTTGTACTGCTGCTCCATCCTCCAAAATCTGTTCTGATATTGCACAAAATAGTGACCCCACACAACAGGCTTTGAACAGTCTTGCTTCGGATGGAGAGTATGTTAATCAGGATGATTTTGTTGATCCAGAGAAATCCGTGTGCATGCACGATTCCAAAATTGAAACATCTAGAGAGTATGCGGACAGAAAACTTGATGACAGCAACAACATTCAGTCATATTCATCATTGCCAGTTCCTGACCCCTCGAGAAATCTTATTGGCGATATATCATTAGATTTTGCCAAATTGACATCATGTGATGACTTTGCTGGTTCCACCTCTGGAGCTCCTTCAAACAATGTGGTTTTGCAGATGAATGGGGCGGATGGCAAAGATTGTCTAGAAGCTATTAGTGATGGAATATCTACAGAGACTAGGACTTCTTTAGATTCTCAGAACATATTGATTTCGATGTCTAGCCAACATATCAGAAACCAAGCAATCTGTGAGCAGAGTCATCTTTCCCGCATAACTTACTACGGGTATTTTGATACATCAGTTGGTCGTTATTTGCAAGATAGTTTACTTAATGAGGTCATACATCTTAACTGCTTGTTGATTTGGTAGATGCTTATTTTATCTTATGATGTTTCAATTGACAATATATTATTTGCAGAAACACAGCTGCTTATCTTGTGGTGAACCCCCAGAAGCTCACATGTACTCTTACACCCACCACAATGGCACTCTTAACTGTTCTTGTGAAAAGCCTCCCCTTGGATGTAACTCTTTCTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030092