BGIOSGA030107

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Revision as of 09:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030107| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030107, complete gene.| tag = OsI_306...")
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Gene Name

BGIOSGA030107

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030107, complete gene.

LocusTag

OsI_30644

Ensembl Transcript ID

BGIOSGA030107-TA

Ensembl Protein ID

BGIOSGA030107-PA

Length

5270

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4899504..4904773

Sequence Coding Region

4904388..4904773,4902974..4903067),complement(4902568..4902635,4901488..4901560),complement(4900932..4901041
,4900740..4900841),complement(4900584..4900593,4900493..4900543),complement(4899504..4899680

Genome Context

<gbrowseImage1> name=IndicaChromosome09:4899504..4904773 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:4899504..4904773 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCAACAGAGAGGCTGTAGCGCGGAGGAAGGTGGAGGTGGCGTGGATCTGGTGAGGACATTGCCCCGTGAGCAAGCGAAAGCCAGGACAGCGTGGCAACGAGGCGAGGTAAGGAGCCAACATGGATCTAACAAGGCGCGACACGTGACGATCACTGGTGCAGGCTCCCTCGTCAATGGTTGGCTGCACGGTGACGGGAGGTGGCGCCTTAGCATCACGGTTGGCGATGTAGGTTGCCGGATCCGTCCTTGGCCGCAGCTTCCTCGGGCATATCCCCTTGCTCAGCCTCCGGCATCTGTTGTCGCTACCCACCGAGTCTGTTGTCGGTTGCCTCCGAAGATAGATATCAGTTACTTCTGTGGACAACAGACATCTTCCTGGAGATATCCCACAATGGGCATCAGTAAGACTGAAGTGAATCTGCTGCGGTTGCTTGACTCGGCTCCGCGGCAGCAGAACCAGGCTAAACTCATTCATTATGTCACCACATCGAGGGAACTGTTGGAGAAGCTGGCAGCGGAAAATACGTCAGAAGGGATATCAAGTACTGCAATAGGAAGGCTAAATGAGTATTCAGAGAGGTTTGAGGAACTTGCCGCAAGGCTTGCTTCTCTAGTGCCTGGTTACGAAAATGCTGTTGAAGCCATCAGAAAAGAAGAAAGTTACCTTGAAGGAGAACAAATTAGAAGTCCAATAGCCTTATCCCCTGGATTGAGGAGGCGATTGACAGCTCAGCTAGAGATTGAACAACCTACCAATGCAAAAGAAAGAAATGTTGCAGAACCTCTTAGATTGGATGCAGCAGCTCAGGCAAACATAGAGAAACATAGGAATTTGCAACTGAAGGATAGCAGTCTTATGATGAACCAGTCTGTGCAAGCAACAGAGAAGATACTTGATTCAACTGAAAGGGCTGTGGCATATAGCTTGGCAGGCACTGACCGTGCAAATGCACGAGCTGTGGAGGTGTCTTCGTTAACCTCCAAAACAACTTGTTTCCACTGGTTTCTGCTTTTTGTAATGACCTGTATGTTCATCATGGTTGTTCTACTTATACGGGTAACCTAA</cdnaseq>

Protein Sequence

<aaseq>MVQQRGCSAEEGGGGVDLVRTLPREQAKARTAWQRGEVRSQHGSNKARHVTITGAGSLVNGWLHGDGRWRLSITVGDVGCRIRPWPQLPRAYPLAQPPASVVATHRVCCRLPPKIDISYFCGQQTSSWRYPTMGISKTEVNLLRLLDSAPRQQNQAKLIHYVTTSRELLEKLAAENTSEGISSTAIGRLNEYSERFEELAARLASLVPGYENAVEAIRKEESYLEGEQIRSPIALSPGLRRRLTAQLEIEQPTNAKERNVAEPLRLDAAAQANIEKHRNLQLKDSSLMMNQSVQATEKILDSTERAVAYSLAGTDRANARAVEVSSLTSKTTCFHWFLLFVMTCMFIMVVLLIRVT</aaseq>

Gene Sequence

<dnaseqindica>1..386#1707..1800#2139..2206#3214..3286#3733..3842#3933..4034#4181..4190#4231..4281#5094..5270#ATGGTGCAACAGAGAGGCTGTAGCGCGGAGGAAGGTGGAGGTGGCGTGGATCTGGTGAGGACATTGCCCCGTGAGCAAGCGAAAGCCAGGACAGCGTGGCAACGAGGCGAGGTAAGGAGCCAACATGGATCTAACAAGGCGCGACACGTGACGATCACTGGTGCAGGCTCCCTCGTCAATGGTTGGCTGCACGGTGACGGGAGGTGGCGCCTTAGCATCACGGTTGGCGATGTAGGTTGCCGGATCCGTCCTTGGCCGCAGCTTCCTCGGGCATATCCCCTTGCTCAGCCTCCGGCATCTGTTGTCGCTACCCACCGAGTCTGTTGTCGGTTGCCTCCGAAGATAGATATCAGTTACTTCTGTGGACAACAGACATCTTCCTGGAGGTGATGTCACAATATCCTTTGCATCCGTGCCATAGGATGGACTCTCTCATTGAAAACCTAGAGATAGTGATATTCAAGATGTCGCAGCCTTCTTGAAGGCGTTGTATTGGAGGTTCCCTATTATTGTGATATCCTTGTGGTGTCTTCATCGGATCGGATTCATTTGGTGGTGGTAAGATCTGGACTAATGACTGATATACAGTTCAGCTAATCTCCATTGTTTCTTCCGCTTTGGTTTGACGCCATATGATAATGGTGATAGGTACAAAATTTAATTATAATACAAGTATCGACCATTCATTTAAAAGATTATGCTTTTCCGCTTTGAGGAAGACAAGAACCAGCTCGGTTATACACACTCTAGCCAACCATGCATGGAGATCTATATTTTTAAGGATGGTTTTCTTAGCGGTTTTATTGTTTCTAACCAAGTTATAATTTTGTATTTTTTTTACTTATTCATCCAGAAATTCTGTAATATTTGGTTGTAGTTTAGTAAAGGCCAGAATGAATTCCATTATAAAAAAAGTAACTCTTATTTAGACAATGTTTTGTAATTTATAGTCGCACATCATGAATTGGAGTTGAATGGACTATTTGCTATGGTTTTCTTTAGAGAAGCTATGATTCACATTTTTCAATAATTATATATATGTGAATTTTTCTCACATACTTTGGCTAACAATCACACGAATAGTCCCTACATGGCAATTTCTACAGTTTCTGCCTTATCCACCGTCCAATCTCATCGGACGGTTCTTAGTTGCCTTCTCAGCCCATCAGGCCCAGCACCCAAACCGCTGTGCTCCCTTCGTGGCGGCGACGCCGACGAGGCGTACGCGTCTTCTCCGCCGCCGCCGCCGTCCGTCCGTCCGTCCGGTCGGCCAGCCGGCAACGGCCACCCGTGAGCGACATCCGCGACCGGCGAGAACCGCTTCCTTTGGTAGTCCGTGCCCGACGCCAACAAGCGGAGGAGGTGTCCCCTTGAACCTTTCTACCACTTGAATCTTGCAATCTTTTTCTTTTCCCCTTGCAATACAATTCTCCGTTCGATTGTCCCCGCCTCGGATTCTTGTATCTCGACCCGTCGATTGGATCTTGTTTCATTTTCATACGAATTGTCCATCGGATTGGACGCGTGCGCTAAGGTAGTTTGTAGTACAATTTTCCCCCTCTCCATTCGGAGAAAGGCCGTTCATAGTTTCTTCTGTTTATCTGGAATCAGGAGATTCATGAATTGCGATTTCGCGTTCATATTTCTGGAAATGGAGTTAATGCAATTGTGGTTATGCTTCTATTGTTGGTACCGTGTTTGATCAGATATCCCACAATGGGCATCAGTAAGACTGAAGTGAATCTGCTGCGGTTGCTTGACTCGGCTCCGCGGCAGCAGAACCAGGCTAAACTCATTCATGTAAGTATAGCTGTATCTCGGAATCCTAGCAGTTTTATTGTCCTAGTGGATTTCGCCCCCTAATTTTGGTCTGCACTCAGATTTCAGTCTGATGAGAATGGTGTATTCTAAATAACGTGCAACCAGTTTTAGAGGAAAAAGAATATAAACTAATATTTTGCTGTTTTACCATTTGCTAATTGAATCGGTGATCTGCCAGCTTTTGTTGGATCCTATTTAGTTCATGTGTAACATTCGAGACATGATTTGGTGCTCTCTGTGGGACAACTGCATTTCACGTTTTAGATTATAAAGTTCAATTCCGTTTTCCTCTTAGCATGTGCAACCTTCAATCGCAGTATGTCACCACATCGAGGGAACTGTTGGAGAAGCTGGCAGCGGAAAATACGTCAGAAGGGATATCAAGGTACCTGCTAATTTGCTTTTATCATAATGTTCAACTGGTAACATTTTGGAATAATAAAATAGAATGGCGTAGCCTACAATCTACTAGTAGGCTTGTGTTAGTTGGTGCCAATGTTAGTATTGCTGGCACTAGACAGACCATTTAGTCAGATTTAGTCGTCAGTACTTTGGATTGCTGCGTCTGAGGACTGAATCACACAGGAACAAAAAAGAAGCGGTGGATAGCTAGTTATCTACCAGCAAAACATGTTTGGAGCATTATAGTTAAATATTCTTGAAAAAGGGTAACGTGGAAAGATAGTGGTAAACTCATGTTATTATTGCTAAAAAAATGACTACAGTTGTTGTTTACTAATTGGGCTGATTGAAAAGTCAAAACATCACATTTAGCTGGAGACTTTCTAGTGAAAATGAACATAATTTATTTCTTTTATCATTCGGAGGTCATGAATTTCTTATTACTAGACTGGACATAGTTGAAGGTACTAAGGAAATTCCTATTTTTTTTTAAAAAAAATGACCAATTTTGGCTTCTTACAATGTAGACAGGTTATTTCAAAATTATCATCTATTCATCTTTCTAGAACTGTTGAATGAAGCGACATAATGTAGCCAATGGTTCCTCATACAGATAATTCATGTAAGACTACTTGCAGGAATAGTGATATGGACCAGTTTTAATCATGAATACCTAATTAAAATATACTACATATATATGGAGAATCATTTTTCCGGTGCAGCCTTTAAATAATACTTAGTTTATAAATTAGATATTACTTTTTGGTTTACTGGATTTTTCGTACTCTTTCTGCAAGGCAAGCTTCTTGTACCAATCTCTAGAATTTCATATTTTTGTTTCTTCCTTTCAATTCATAGTATGTTTTGTACAGATTAATTTCCTATGACATTTGCTGGAAGACTCATTCCTCCATATGTTTACCTCTACTATCTTCTTGTATTTGTATAACTGTTACATCTTCATTCATGGACAACTTCCTCTTGATTCAGTACTGCAATAGGAAGGCTAAATGAGTATTCAGAGAGGTTTGAGGAACTTGCCGCAAGGCTTGCTTCTCTAGTGGTATGTATTTGGTTGTTCAATTCCTCTTTGAGCAACTAGTAGATTTTACTGTGTTCTTTCTTTTGGGTTCAATTTTAAACAGTGTCTCCATTACTATATAATCTACCAACCTGTATCTTTTCTACTTCTGACCGTTTGATCTACTATGTATAAATAGACTAGACTATAAGTTCTTAGTTATGTTTACAATGGCCTAGATTTTTTTTACAAATTATCCTAATCAAACACAACTGCTTGCATGCAAAACATTGTCAACTGATTTTTTTTTTCTGTTCAATCTCTCCTGTTTTAATTCCAAGTTCCAACATAAGCGGTTAAATTGTTATCTGTTTATTTACCATGTATAAATGTAGTCCTAGGTCCTCAGTTATCTGAATGCAAAATGCTATTATAATCATATAGCGCATACGCAGGCACTTTCTCTAACTATGCTTGTGCTGGTTTAGCCTGGTTACGAAAATGCTGTTGAAGCCATCAGAAAAGAAGAAAGTTACCTTGAAGGAGAACAAATTAGAAGTCCAATAGCCTTATCCCCTGGATTGAGGAGGCGATTGACGTTAGTTAATTCTGTTCCCTTGCATGCACTAAATTGGTCATGGAGCTCTTTCATTTTTTGGTAATCCGTCTTATTATTATTGTTAAGCAGAGCTCAGCTAGAGATTGAACAACCTACCAATGCAAAAGAAAGAAATGTTGCAGAACCTCTTAGATTGGATGCAGCAGCTCAGGCAAACATAGAGAAACATAGGTATGTTCAGAATTACTAATATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGAGGGATTTAGGTATCTTAAATCAATGAATATACTGATTGTACTTTTATGGTTTCATTGTCTTTGCAGGAATTTGCAAGTAAGATTTGACTAATGAAATTGTTGAATTAGCACGCCAGCTGAAGGATAGCAGTCTTATGATGAACCAGTCTGTGCAAGCAACAGAGAAGGTAGACTCAGACTTATTTTTTGTTGGTACTTGATACTCCTATGTGAGTTAACTCTCCTTCTGGTTATATAACTTGGCAAACATTCAACTCTTTTTACCACTTCTATAACTATTCCTGAATGACAATTCCATCATTCACCAACAATATGAACTTCCTTGTGTGAATGCTGTTCTAATAATTAGTGTTATGTAACTGAATTTTGATATTGTTCCCAAAGGACCTTGTAGACTTGAATTAATTCCCACCTGCTGATAAGTGATAATGCTGCATCAATTTAGAGCAACAGTTTAGGTGTTTTTAATCAAGAAAATGTGAAACCACCTTAGCTTCACGCATCTTTGGAAAACATTGGGAACTGAATTACATACATTCTTGTATCTCTTGCCCAATTTACTGCTCGATAAGTGAAATAAATACTCTTTAACATGTGCACCTATATGTCAGAGACCCAATCATGTACCACCCCCTCCAACCATTTCTATCATTCATGCATATTCTCTTCAGCATCCACTCTAATATTTAGTATGTAATCGAGGGCAACCAATTGAATTTAAAAAATTCCATTTTATGTTGACTATATTTGGATCACATGTAGGACTTCTGGACTTGTATATAGGTTAAGTTTAATAAATGACAGCTGATAACATGGTTTGATTAGTCAAATTGTCATGTTGCGGCGTAAAAGGATCTTACACAAAAAAATAAAAAAAATTGATCATCAAAGGATTGAAACTTTGATAACCCCTTGAGTGTGAATGTTCTCCTTTTGCTTGCTGAAAGCATATAAAAATGTCCACTTACTGTTGATGCAGATACTTGATTCAACTGAAAGGGCTGTGGCATATAGCTTGGCAGGCACTGACCGTGCAAATGCACGAGCTGTGGAGGTGTCTTCGTTAACCTCCAAAACAACTTGTTTCCACTGGTTTCTGCTTTTTGTAATGACCTGTATGTTCATCATGGTTGTTCTACTTATACGGGTAACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030107

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030107&oldid=29311"