BGIOSGA030115

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Revision as of 09:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030115| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030115, complete gene.| tag = B1008E0...")
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Gene Name

BGIOSGA030115

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030115, complete gene.

LocusTag

B1008E06.27

Ensembl Transcript ID

BGIOSGA030115-TA

Ensembl Protein ID

BGIOSGA030115-PA

Length

5363

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4674577..4679939

Sequence Coding Region

4678321..4679939,4674577..4675657

Genome Context

<gbrowseImage1> name=IndicaChromosome09:4674577..4679939 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:4674577..4679939 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTCGTACAGCACCAGCTGGACGGACGTGGTGATCGATCGAATCCACGGGGAAGCGAAGAGCGCATACGAGTCCATCCCTCCGTATTTTCGAAGGTTCGATGCCTTCGGAAACGACGAACACCCTTCCATTTTCAAGCCTCGCCTGAAGCCGCAGGTGAACCAGCTTGAGCTTTTTGCTATTACTACTACTAGTCCTGCTCACGGTCCGGGACAGCCACCGCTGGATTCCGCCGGCGGAGAGCGTGGGCAGCTGCGGCGGCCACCGACGCCAGAAACGGACAAGGACCACATAGTCGTTGCTGCCGTCGGGCCGTACCACCACCGCACCGCATCGGCGCAGCAGCAGCCGCCGCCACTCATCACTTGTGCCAAGAAGTGTGGCATCGTCAAGTACCTCACTGGCTCGTTCAACCTTGACGTCGTCGGCTTCCTACAATGGGTGCAACGCAACGAAGAGCGAGCGCGGCGCTGCTACGAGCGGGAGTCCTTCCAGATGAACTCCCAGGAGTTCGCCGAGATGCTGCTGCTCGACGGGTGCGTCCTGCTCTTCGCCATCTTCCTTCTCAGGCCGAGCATACGCGAGGACAAGCTGCCGGCCAAGCTGGCTGCCGACGCCGATCACGGGAGGGAGTTCAGGAACCTGTCCGCACATATATCCTTCCACATGAAGCAGACCACGCTGGACCTGCTGGTGCTGCACAACCAGATCCCCTTCTTTGTGCTCACCGAACTGCACAGCCGACTCAAGAACACCTTCTTTGCCGGCGTCAACTACAGCTTGGAAGAACTCGCTCTCTCTTGCTTCCAGGACGTCCACCCGTTTGGTTTGAAAGAAGGCGATCTGAGCCCGACGACACAGAGAGACGGAGGTGGCAATGGCGGCGGCAACGGCACTGAACGGTTCCCACAACGAGTCCATCATCTGCTGCATCTTTTCCATTGGTCTCTAGTGCCTGGACAGAAGTATGGCGTGGACATAAATTCCATTCCACCGAGGGAGCCAGAGTCACATCTGCCCAGCGCGACCGAGCTAGAGGAGTCGCTCACCATCTTCACCAAGCAGAAGGATGCCAAGGGTAGCAGGAGCTCCTGCTGCTTGGACATCACCTTCGAGAGCAGTAGGATGGCCACGCGCGGGGTGATGCGCCTCCCTGCGCTGCACATCCACGGGTACAGCGAGGCCGTCTTCCGCAACCTCATCGCCTTCGAGCAGAACCATCTCCGCTGCGGCCACGGCGTCACCACCTACGCCATCTGCATGGCTCGCCTGCTCCAGTCTGACGCCGACGCGAGGTTGCTGAGGAACAGCGGGATCCTGCCGTACACGCAGCGGACCGACAAGGAGATCGTCGACTTCTTCAGGCAACTGGTCGACGAGTGCAGGAACACCTGCATGCCAGATGATCTTATTGCACTCTGCAAGGATGTGGCGGCGCACCATCAGAGCACAGGCGTCAGGGTCATCAAAGGCTTCGTGCTTCAGTGCTTCCCCAAGCAGACCATCACTTTCTTTGTCATCTTCGGTGCCATAATCTCCATTGCCACACTCATCAATACCGTCCACTCCATGTATAGATACTATCACCCCCGTGGAAACCTTCCTCCCATGGGGAGAATGGCAGAAGAAGTTTGGACATTGCGGTTTTTCAAGCATGATCATGGTCCAGGGGCAATGGTTGTTGAGGAGCCAATGGATCGAGACCTTGTCTGCTTTTTCAATATGGTTGAGATAATAGAGAAGCTTGGGTACCAGAAAAGTGATGAAATGTTTTTTGCCCAACCTGGATGTTACTGCCGCACATCAATGACAAGAATCAAGGGTGACAGCAATGTCATGGACATGCTTAGGGAAAATGATAGCATAAATAAAGTTGACATACATATTTTTGACAGAAAAGTTGCCTCAAGCAGTGCACTAGAAGAGGATGTTGTTGCAGATGCCACTGATAATGTGGAGGCAAATAAAAATAGAGATTTAGAAGAAAAAGGATCTGAACAGTTGAAGAACAGTGATGAAGACTTGTGGATGGACCAGGGTGATAATACATTTCTCTTTGTTGATGGTAAAGAAGATGAAGACTCAGAATATAGCGATGATGATTTTGACCTTGATCAAGAGAGGATTGACTATATTCATAAGTTACAGGAGATAAAGAGACAACGAGCTGACACTAGGAATTGTTGTGAAAGTGATACTGATGATGAGGATTTGTTTGTCCCTGTTGTTGATTGGAGTGCTCTATCTGTTGTTCCGGTGGACTCTGAGGATGTGGCAGAGGCAATATCAAACAAGGCTCAATGTGGTGTTGTCAATATTCAAGATGGTACAGATGTTGCATCATCAAATTTGCAAAAGAAGAATAGCACTAAGGCGAGTAGGAATGTCAAAGGACAAAATGATGTGGGGTCTTCTCAGGTTGAGGAAACTGTTTTTTCTGATCCTCCAAGTGAGGATGGTGGGGCTAGTGCTGTTGAATATGAAAGTAGCGATGATGGTCAAAAACTTGATGCACAAGCTAAGAGGAGGAAGAGGAGAAGAAGAGAGAGTAGGGTGGTTAACAGGAGGATTTACTTTGATGAAGATAACATTATGGACACCACACAATTACAGGAGGCTATGTGTTTTACCGATGTCGACCAATATAGAAGGGCTTTAAAATCCTATCACATTGTCCAAGGAAGAGACTACAGATAG</cdnaseq>

Protein Sequence

<aaseq>MSSYSTSWTDVVIDRIHGEAKSAYESIPPYFRRFDAFGNDEHPSIFKPRLKPQVNQLELFAITTTSPAHGPGQPPLDSAGGERGQLRRPPTPETDKDHIVVAAVGPYHHRTASAQQQPPPLITCAKKCGIVKYLTGSFNLDVVGFLQWVQRNEERARRCYERESFQMNSQEFAEMLLLDGCVLLFAIFLLRPSIREDKLPAKLAADADHGREFRNLSAHISFHMKQTTLDLLVLHNQIPFFVLTELHSRLKNTFFAGVNYSLEELALSCFQDVHPFGLKEGDLSPTTQRDGGGNGGGNGTERFPQRVHHLLHLFHWSLVPGQKYGVDINSIPPREPESHLPSATELEESLTIFTKQKDAKGSRSSCCLDITFESSRMATRGVMRLPALHIHGYSEAVFRNLIAFEQNHLRCGHGVTTYAICMARLLQSDADARLLRNSGILPYTQRTDKEIVDFFRQLVDECRNTCMPDDLIALCKDVAAHHQSTGVRVIKGFVLQCFPKQTITFFVIFGAIISIATLINTVHSMYRYYHPRGNLPPMGRMAEEVWTLRFFKHDHGPGAMVVEEPMDRDLVCFFNMVEIIEKLGYQKSDEMFFAQPGCYCRTSMTRIKGDSNVMDMLRENDSINKVDIHIFDRKVASSSALEEDVVADATDNVEANKNRDLEEKGSEQLKNSDEDLWMDQGDNTFLFVDGKEDEDSEYSDDDFDLDQERIDYIHKLQEIKRQRADTRNCCESDTDDEDLFVPVVDWSALSVVPVDSEDVAEAISNKAQCGVVNIQDGTDVASSNLQKKNSTKASRNVKGQNDVGSSQVEETVFSDPPSEDGGASAVEYESSDDGQKLDAQAKRRKRRRRESRVVNRRIYFDEDNIMDTTQLQEAMCFTDVDQYRRALKSYHIVQGRDYR</aaseq>

Gene Sequence

<dnaseqindica>1..1619#4283..5363#ATGAGCTCGTACAGCACCAGCTGGACGGACGTGGTGATCGATCGAATCCACGGGGAAGCGAAGAGCGCATACGAGTCCATCCCTCCGTATTTTCGAAGGTTCGATGCCTTCGGAAACGACGAACACCCTTCCATTTTCAAGCCTCGCCTGAAGCCGCAGGTGAACCAGCTTGAGCTTTTTGCTATTACTACTACTAGTCCTGCTCACGGTCCGGGACAGCCACCGCTGGATTCCGCCGGCGGAGAGCGTGGGCAGCTGCGGCGGCCACCGACGCCAGAAACGGACAAGGACCACATAGTCGTTGCTGCCGTCGGGCCGTACCACCACCGCACCGCATCGGCGCAGCAGCAGCCGCCGCCACTCATCACTTGTGCCAAGAAGTGTGGCATCGTCAAGTACCTCACTGGCTCGTTCAACCTTGACGTCGTCGGCTTCCTACAATGGGTGCAACGCAACGAAGAGCGAGCGCGGCGCTGCTACGAGCGGGAGTCCTTCCAGATGAACTCCCAGGAGTTCGCCGAGATGCTGCTGCTCGACGGGTGCGTCCTGCTCTTCGCCATCTTCCTTCTCAGGCCGAGCATACGCGAGGACAAGCTGCCGGCCAAGCTGGCTGCCGACGCCGATCACGGGAGGGAGTTCAGGAACCTGTCCGCACATATATCCTTCCACATGAAGCAGACCACGCTGGACCTGCTGGTGCTGCACAACCAGATCCCCTTCTTTGTGCTCACCGAACTGCACAGCCGACTCAAGAACACCTTCTTTGCCGGCGTCAACTACAGCTTGGAAGAACTCGCTCTCTCTTGCTTCCAGGACGTCCACCCGTTTGGTTTGAAAGAAGGCGATCTGAGCCCGACGACACAGAGAGACGGAGGTGGCAATGGCGGCGGCAACGGCACTGAACGGTTCCCACAACGAGTCCATCATCTGCTGCATCTTTTCCATTGGTCTCTAGTGCCTGGACAGAAGTATGGCGTGGACATAAATTCCATTCCACCGAGGGAGCCAGAGTCACATCTGCCCAGCGCGACCGAGCTAGAGGAGTCGCTCACCATCTTCACCAAGCAGAAGGATGCCAAGGGTAGCAGGAGCTCCTGCTGCTTGGACATCACCTTCGAGAGCAGTAGGATGGCCACGCGCGGGGTGATGCGCCTCCCTGCGCTGCACATCCACGGGTACAGCGAGGCCGTCTTCCGCAACCTCATCGCCTTCGAGCAGAACCATCTCCGCTGCGGCCACGGCGTCACCACCTACGCCATCTGCATGGCTCGCCTGCTCCAGTCTGACGCCGACGCGAGGTTGCTGAGGAACAGCGGGATCCTGCCGTACACGCAGCGGACCGACAAGGAGATCGTCGACTTCTTCAGGCAACTGGTCGACGAGTGCAGGAACACCTGCATGCCAGATGATCTTATTGCACTCTGCAAGGATGTGGCGGCGCACCATCAGAGCACAGGCGTCAGGGTCATCAAAGGCTTCGTGCTTCAGTGCTTCCCCAAGCAGACCATCACTTTCTTTGTCATCTTCGGTGCCATAATCTCCATTGCCACACTCATCAATACCGTCCACTCCATGTATAGATACTATCACCCCCGTGGAAACCTTCCTCCCATGGGGAGGTGATCGAGCTTTCGTCGTCGGTCGCACATGCATGCTTGTCAGATAATCCACTATAATGGTCGTCTTGTGGTCGCGATCATGTCGCGCGCGTCTGGCTTGATGCACGCTGTGTTCGTGCAGAGAGTCAAAGTCTTTGTTTTCTCAGAATAGAGCTCGTTTTGCGTGTGTCATGGATGTCTGTGGGATGGCGTGGATTCTCAGCAAGTCGTGGCATAAGGCCTTTCATGGGATGGCACGGTGGCGTGGTTTGTGGTGAGTGCAAATGTGTGAGATAATCAACATGCTCTGTTGTTTTTACCTTCTATAAGTATAGATGGCCAAAAGGCCCGAGGCCCGACGGCCCGGCCCATAGCACGGTATTTTGGCCTGGCCCAAGCACGGTACGGGCCGACGGAGGTTGGGCCCGTGCTGGCCCGGCCCGACCACCGGGCCGTGCCTGGGCCCCTCCACTGCCGTTGGCCCGGCCCGGCACGATGGGCCGGCAGTTAGGCCCGATACACAAAAAAATAGGGGAGTAAAAATAGACAAATTATATGCCATGCACGAAAGAATAGGGATCTAAAATAGACTTTTTTTATCTATACATATGTCAGCCAAAGAGGAGGGACAGAAAATAGACTTACTTTAGCTATACATATGTCAGCCCAAAGAGGAGGGACGGAAAATAGACTTATTTTAGCTATACATATGAAATAGCCCAATGAGGAGGGACGGAAAATAGACTTATTTTAAAAAGGCCCGATGGGCCACCCATGCCTTCGGGCCGGCACGGCACGGCCCGACAGCTGGTGGACTGCCTGGGCGAGAGGTGCAGCCCATGGGCCGGCATGGCCCGGCACGAAGTGTCTCTCGGGCCATGCCGGCCCGATGGCTGCTGGGCCGTGCCCAGCCGTGCCTGGGCCGGGCCGTGCCGGACGGGCCCTTTGGCCATCTATATCTATAAGTGTGGAATGAAGAGACACAGATAAGTCGTGAAGCTGCCAGCACCAAAATCTCTCTCTCGTGTTAACCTTCTCCCTTCCCTACAAGGTGTTTGATATGGGTTTCGCATGTTGCAATGGCTCCGGGGCTGATAATTGCTACCAGGGCATATCAGCTCTAGTCTTCGCCATGAGCAAGCACCTCCAAGTGACTGCCTGAAACCTGGCTCGCCTTTCCACGTCGACACCCATATGCAACTGCAATTGGTGGTTGGCGTGAGTTCTAATTCTAATCTTTCAGGCGGACGTCCACCCGTTTCTTGCATGCCACCTAAATGATTATGAAAAAATTCTAAAAAAATTCACAAGATAGTTAACATGTAATATATCACTTCACAAACATGCAAGTTCAAATTTGACTTCTATAAGTTGTAACAAAAATAACAAATCAAACTCTAACTCATATACATATATTCACAGTCAAATTTGTTATTTTTGTTACAATTTGTAGAAGTCGAATTTGAACTTGCATGTTTGTGAAGTGATATATTACATATTAACCTATCATGTCAATTTTTTTGAAAATTTTTCATAACCATTTAGATGATATGTAAGAAACGGGTGAATGTCCACCGAGTGTTTAAAAGAGTTTCCCGTGAGTTCGTGTGAACAAGGATGCAAATGGATGACCTGCTTTCTTTTTGTGTCAGAAGATGTCAGGTCGCCTGTGCGTATGGGGATCTTTAGTGACTAAATATCTCCCTCCTATGTCTTAACTGGATCGAACCAGAGACAAGAGATTTAGACTTCCTCATCCTTATCTCTTAGCGATAGACCTCCTCATCTACATCTTCTCTCGCTATCTCTCTCTGTACTCTCTCTCTCTCTCTGTTTTTTTTAGAACTCATGTTTTTATTTAGAGTTAATTTCACAAAACTACACGTTTTGTGGTCTATGTTGCAGAAAACTACACACACTTTGACACTTGGCACTTAAATACATATATTTTGGTAGTGTAGTTTCACAAAACTACACTGTCAATGAATGAATTCACACGCGAGATGATGTGGTTGTCCACCTAGGACGAGGACGTGGCATCGTGGGACAAGCTGGACTTCTATGCGCATGGCCCACTAAAACTGCTGCAACTAAATATACGCACATATGTGCCTTCCAATCCCAGCACGATCTCACGATTCTGCCTCCTCATCTCTGTCGTTTCGGAGGACGACGGGGTGTTGACGCCGGCGCCGGCGCCGGCCGCTGAGTTCATCTTTGCCAAGTGAGTAAGTTCCATCCCATTAGTCCTGCTATTCTGTGCTACTCAGTTTCCAATCTCCTCTCTTTTGTTGTGTCACCATCCACGCTCCTGTCTTGTGTTATGGAATTTGGTTAAAAGTCAAAATGACCACAAAATCGATTTGATGCTCATGACTATATAATTGGGGATCCCATATAGCTGAACCGAATTTACATACTGATAGTAAGACAATAATAATTTTCTGAACAATTTAGTCATGTTCTACTAATCAGTTATATAATCCATGTTTATAGTGGACTGGTACAGCAACCCAAGAGATACCATTTACTCATAGGTTATTAAACTAATCCTTTTAGACCTCACAATATGTATATGTGTTAACAAAATCCTTGTGTCTACATCAGTAAATTGAATTATATGTACATATTATTGTTTATCTCCAAGCTGAATTTAAGTCTGAAAGTTATGTTCTAATTATCAGAATGGCAGAAGAAGTTTGGACATTGCGGTTTTTCAAGCATGATCATGGTCCAGGGGCAATGGTTGTTGAGGAGCCAATGGATCGAGACCTTGTCTGCTTTTTCAATATGGTTGAGATAATAGAGAAGCTTGGGTACCAGAAAAGTGATGAAATGTTTTTTGCCCAACCTGGATGTTACTGCCGCACATCAATGACAAGAATCAAGGGTGACAGCAATGTCATGGACATGCTTAGGGAAAATGATAGCATAAATAAAGTTGACATACATATTTTTGACAGAAAAGTTGCCTCAAGCAGTGCACTAGAAGAGGATGTTGTTGCAGATGCCACTGATAATGTGGAGGCAAATAAAAATAGAGATTTAGAAGAAAAAGGATCTGAACAGTTGAAGAACAGTGATGAAGACTTGTGGATGGACCAGGGTGATAATACATTTCTCTTTGTTGATGGTAAAGAAGATGAAGACTCAGAATATAGCGATGATGATTTTGACCTTGATCAAGAGAGGATTGACTATATTCATAAGTTACAGGAGATAAAGAGACAACGAGCTGACACTAGGAATTGTTGTGAAAGTGATACTGATGATGAGGATTTGTTTGTCCCTGTTGTTGATTGGAGTGCTCTATCTGTTGTTCCGGTGGACTCTGAGGATGTGGCAGAGGCAATATCAAACAAGGCTCAATGTGGTGTTGTCAATATTCAAGATGGTACAGATGTTGCATCATCAAATTTGCAAAAGAAGAATAGCACTAAGGCGAGTAGGAATGTCAAAGGACAAAATGATGTGGGGTCTTCTCAGGTTGAGGAAACTGTTTTTTCTGATCCTCCAAGTGAGGATGGTGGGGCTAGTGCTGTTGAATATGAAAGTAGCGATGATGGTCAAAAACTTGATGCACAAGCTAAGAGGAGGAAGAGGAGAAGAAGAGAGAGTAGGGTGGTTAACAGGAGGATTTACTTTGATGAAGATAACATTATGGACACCACACAATTACAGGAGGCTATGTGTTTTACCGATGTCGACCAATATAGAAGGGCTTTAAAATCCTATCACATTGTCCAAGGAAGAGACTACAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030115