BGIOSGA030116

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Revision as of 09:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030116| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030116, complete gene.| tag = OsI_306...")
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Gene Name

BGIOSGA030116

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030116, complete gene.

LocusTag

OsI_30631

Ensembl Transcript ID

BGIOSGA030116-TA

Ensembl Protein ID

BGIOSGA030116-PA

Length

1965

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4672342..4674306

Sequence Coding Region

4674072..4674306,4673797..4674000),complement(4672891..4673702,4672342..4672686

Genome Context

<gbrowseImage1> name=IndicaChromosome09:4672342..4674306 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:4672342..4674306 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATACAGGGCTAAGAGAAAGGCAGGAGAAAAAGTTCTTGGCAATCATAAAAACCAATACATGAGAATTAGAGATTACCTGCAAACTGTCATTGATAAGAACCCAGGGAGCACAGCAGTTGTGTCAACTGTGGATAGAATAGCTCTAGGAATGAATCCTAGATTTTATGGTCTCTTCATCTGCTTGAATGCCCAGAGACAGGGATTTCTCGATGGTTGTAGGCCATTCATAAGCATTGATGGGTGCTTTGTAAAGCTCAGTAATGGAGCCCAAGTGCTAGCAGCTACCGGTAGGGATGGCAAAAATAACCTATTCCCAATAGCATTTGGCGTTGTTGGAAAGGAAGACACCAAAAACTGGAATTGGTTTCTTGAGAGGTTGGAGACAGTCATCGGTAGAGGAGAAGCGCATGGAGGATGGACAATACAGATAGAAGTGGCTAGAGTTTTCCCAGACTGTAAGCATAGATATTGCAAAAGACATCTCTTGGCAAACATGGCAATAGCTGGTTATAGAGGAGAGAAATACAAGAGCTTTGTTGATTCTGCAGTCTATGCTTACACTGAATATGATTACAACAGAGCAATGGATGCATTAAAGGCATTCAATACCAAAGCATGGAAATGGCTTAATTATCTTGGCAAAGAACATTTCAGTAGACATGCTTTCTCCTCTAGGAGCAGGATAGACCTAGTTGTGAACAATCTTAGTGAGGTGTTCAACAACTACATTATTGAGTTTAGGGACAAACCCATCGTAACCATGCTTGACAAAATTAGACAAAAACTAATGGTCAGGGTAAATCAAAAGAGAGACGGAGGTCAACAAGCAATGTGGGAGATCACCCCGGTAGTAGTCGGGAAATTGGAGGTAGAGAAGAAATATGCTAGGTACTGCAATGCTTATCAATCAGGTGTTGGTTTGTGGGAGATTTTAGGATCGGAGAGGCAGTATGAGGTCAACTTATTTTCTAGAACATGTGGATGTAACAAATGGCAACTTACCGGAATACCTTGTAAGCATGCCGTGACGGCAATATTTGCAACAAAAGAGAGGCCTGAGGATTATGTCGATGAGTACTTTAGGAAGGAAGCTTACCTTCGAGCATATGCGCCAGTTATCTATCCAGTCCCAGGAGAGCATGATTGGACAACAACTGATTCACCTGACATTGATCCTCCTAAGTTCACAAAGCAACCAGGAAGACCAAAGAAGAGTAGGAGGAGGGGTCAAGATGAAGCTCCCAAGTCTAAAAGGTCGCGTGAGCCAGAAAACCAAGCTCAAAGATCACATGAGCCAAGTAGTCAAGATCACATCAATAACCATCAACCAAGTTCATATCAGCCAATCAATGAAGGGGGAACAAGCAGGGGAAGGAAACTTGATTCAAGGAGGGGGTGTGCTATAGGAAGCACCATGAAGGAAAATGCTAGAGGAACTACAGACAGGGGAAGAGAAAATGCAAGAGGAACTATAGTCAGGGGAAGAGGAAATGCTAGAGGAACTATAGTCAGGGGAAGAGGAAATGCTAGAGGAACCACAGTTAGGGGAAGAGGTGTAGGGCACACTTCCCTCAACCAATGGATCCCATAG</cdnaseq>

Protein Sequence

<aaseq>MAYRAKRKAGEKVLGNHKNQYMRIRDYLQTVIDKNPGSTAVVSTVDRIALGMNPRFYGLFICLNAQRQGFLDGCRPFISIDGCFVKLSNGAQVLAATGRDGKNNLFPIAFGVVGKEDTKNWNWFLERLETVIGRGEAHGGWTIQIEVARVFPDCKHRYCKRHLLANMAIAGYRGEKYKSFVDSAVYAYTEYDYNRAMDALKAFNTKAWKWLNYLGKEHFSRHAFSSRSRIDLVVNNLSEVFNNYIIEFRDKPIVTMLDKIRQKLMVRVNQKRDGGQQAMWEITPVVVGKLEVEKKYARYCNAYQSGVGLWEILGSERQYEVNLFSRTCGCNKWQLTGIPCKHAVTAIFATKERPEDYVDEYFRKEAYLRAYAPVIYPVPGEHDWTTTDSPDIDPPKFTKQPGRPKKSRRRGQDEAPKSKRSREPENQAQRSHEPSSQDHINNHQPSSYQPINEGGTSRGRKLDSRRGCAIGSTMKENARGTTDRGRENARGTIVRGRGNARGTIVRGRGNARGTTVRGRGVGHTSLNQWIP</aaseq>

Gene Sequence

<dnaseqindica>1..235#307..510#605..1416#1621..1965#ATGGCATACAGGGCTAAGAGAAAGGCAGGAGAAAAAGTTCTTGGCAATCATAAAAACCAATACATGAGAATTAGAGATTACCTGCAAACTGTCATTGATAAGAACCCAGGGAGCACAGCAGTTGTGTCAACTGTGGATAGAATAGCTCTAGGAATGAATCCTAGATTTTATGGTCTCTTCATCTGCTTGAATGCCCAGAGACAGGGATTTCTCGATGGTTGTAGGCCATTCATAAGTAAGTTTTATCATCTTTTTTTAGTTTTTCTGAGTCATGTCCATAATTCTAAGTCTACATATGAATGGCAGGCATTGATGGGTGCTTTGTAAAGCTCAGTAATGGAGCCCAAGTGCTAGCAGCTACCGGTAGGGATGGCAAAAATAACCTATTCCCAATAGCATTTGGCGTTGTTGGAAAGGAAGACACCAAAAACTGGAATTGGTTTCTTGAGAGGTTGGAGACAGTCATCGGTAGAGGAGAAGCGCATGGAGGATGGACAATACAGATAGAAGGTATTACCTATGTGTTCTCTAAATGCTGGTAACTTGTATAACTAGTACTTATATTATGTCACAATGGGTGCAATGTAGGGGCTCATGAATGCAGTGGCTAGAGTTTTCCCAGACTGTAAGCATAGATATTGCAAAAGACATCTCTTGGCAAACATGGCAATAGCTGGTTATAGAGGAGAGAAATACAAGAGCTTTGTTGATTCTGCAGTCTATGCTTACACTGAATATGATTACAACAGAGCAATGGATGCATTAAAGGCATTCAATACCAAAGCATGGAAATGGCTTAATTATCTTGGCAAAGAACATTTCAGTAGACATGCTTTCTCCTCTAGGAGCAGGATAGACCTAGTTGTGAACAATCTTAGTGAGGTGTTCAACAACTACATTATTGAGTTTAGGGACAAACCCATCGTAACCATGCTTGACAAAATTAGACAAAAACTAATGGTCAGGGTAAATCAAAAGAGAGACGGAGGTCAACAAGCAATGTGGGAGATCACCCCGGTAGTAGTCGGGAAATTGGAGGTAGAGAAGAAATATGCTAGGTACTGCAATGCTTATCAATCAGGTGTTGGTTTGTGGGAGATTTTAGGATCGGAGAGGCAGTATGAGGTCAACTTATTTTCTAGAACATGTGGATGTAACAAATGGCAACTTACCGGAATACCTTGTAAGCATGCCGTGACGGCAATATTTGCAACAAAAGAGAGGCCTGAGGATTATGTCGATGAGTACTTTAGGAAGGAAGCTTACCTTCGAGCATATGCGCCAGTTATCTATCCAGTCCCAGGAGAGCATGATTGGACAACAACTGATTCACCTGACATTGATCCTCCTAAGTTCACAAAGCAACCAGGAAGACCAAAGAAGAGTAGGAGGAGGGGTCAAGATGAAGCTCCCAAGGTAACCGGCAGAGCAAGAATGACAACCACAACATGTACTAATTGTGAAGGGATGTACCACAACTACACGACTTGCAAAAAAAAGTTGAGGCCCGATCTGCAGATAAGACTCGATGCTCTCAAGGCAATACTAAATTTCTCCTTTTATGATTTAGTTCAATATTACTCCATTTTGCATTGTTGTAATGTTGGTTTTTTTCTATAGTCTAAAAGGTCGCGTGAGCCAGAAAACCAAGCTCAAAGATCACATGAGCCAAGTAGTCAAGATCACATCAATAACCATCAACCAAGTTCATATCAGCCAATCAATGAAGGGGGAACAAGCAGGGGAAGGAAACTTGATTCAAGGAGGGGGTGTGCTATAGGAAGCACCATGAAGGAAAATGCTAGAGGAACTACAGACAGGGGAAGAGAAAATGCAAGAGGAACTATAGTCAGGGGAAGAGGAAATGCTAGAGGAACTATAGTCAGGGGAAGAGGAAATGCTAGAGGAACCACAGTTAGGGGAAGAGGTGTAGGGCACACTTCCCTCAACCAATGGATCCCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030116