BGIOSGA030117

From RiceWiki
Revision as of 09:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030117| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030117, complete gene.| tag = OsI_306...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030117

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030117, complete gene.

LocusTag

OsI_30629

Ensembl Transcript ID

BGIOSGA030117-TA

Ensembl Protein ID

BGIOSGA030117-PA

Length

2008

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4640410..4642417

Sequence Coding Region

4641241..4642417,4640410..4641140

Genome Context

<gbrowseImage1> name=IndicaChromosome09:4640410..4642417 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:4640410..4642417 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCATCCTCCCTTCTTTCTGCTCCTTGTGTCGCTTGGCTTCAACCTTATAGCCCTTTGTGCCGGTCAAAACCAATTCATCTACCATGGTTTCACCGGCAAAAACCTCACTATCGATGGCACCACCAAAATCACACCGGAAGGACTCCTTGAGCTGACTAGTGACAAGAATGATCTCAATGGCCATGCATTCTTCCCAACACCTATGCATTTCCGCAGTTCACCCAACAGCACCGTTCAGTCATTCTCGGTGAACTTCGTGTTCGCCATCCAGTCCTTCTACTCCGACAGAAGCTACGATGGCATGGCGTTCTTGATAGCCCCAAGCAACAATCTCTCGACTGCGTGGCCAGATGGGTACCTGGGTCTCTTTAACATCAGCAACAGAGGGAATTCAAGTAACCACATCCTCGCAGTCGAGCTCGACACCTTTCAGAACAATGAGTTTGGGGATATCAGTAACAGCCATGTTGGCATTGATATCAATGACGTCCGCTCCGTGAATTCCTCCTTTGTTGGCTTCTATGATGACAAGAACGGGATTTTCACAAACTTGACTCTGTACAATGGTCGGGCTATGCAAGTTTGGATGGAATACAGCAAAGAGGCCACGCAGATCACCGTGACCATGGCTCCCATTGATAAACCAAAGCCGAAGAGGCCACTGCTCTATGCCACCTATGATCTCTCGACTGTGCTCATAGACCCTGTGTACATAGGTTTTTCAGCTGCAACTGGCGTAATTAGCACACGACATATCGTGCTTGGCTGGAGCTTTGGCATGGGTGTTCCAGCTCCGGACATTGATATCACCAAACTACCAAAGCTACCTCGTGTTGGAACCAAGCCTCGTTCCAGTGTCTTGGAAATCGTCCTCCCAATAGCCAGTGCCATGTTCATCATCATTGTCGGCACCATGGTCATTTTGATTGTGCGGAGGAAGCTACTGTATGCTGAGCTACGAGAAGATTGGGAGATTGATTTTGGGCCTCAGCGGTTTTCATACAAGGACCTGTTCCATGCCACTCAAGGATTTAAGAACAAAAACATGATTGGAGTAGGTGGATTTGGGAAAGTCTATAAAGGAGTCCTTGCGACATCCAAATTGGAGATTGCCGTGAAGAAGATCTCCCATGAGTCGAGACCAAGGAATGAAGGAGTTTATAACAGAGATTGTAGTCTTGATAAGTATCTACATGATGTAGACAATAGGGCTATACTTAATTGGGCTCAAAGATTTCAGATAATTAAAGATGTTGCATGTGGATTGTTCTATTTGCACGAGAGATGGGAGAAAGTTGTTATACATCGAGACATAAAGGCAAGCAATATACTCCTTGATGCTGAAATGAATGGGAGATTAGGCGACTTTGGGCTTGCACGACTATATGATCATGGTACTGACCCACAGACTACACATGTGGTTGGCACCATGGGCTACCTAGCACCTGAGATGGTACAGACAGGTAAGGCATCCCCTCTCACAGATGTGTTTGCTTTTGGCGCATTCCTTCTTGAGACCACTTGTGGACAAAGGCCAGTGAAACAAGACTCTCAAGGCAACCAACTTATGCTGGTTGATTGGGTTCTTGAGCATTGGCATGATGGATCTCTCACTGAGGCAGTGGACATGAGACTCCAAGGTGATTATAACATTGACGAGGCATGCCTAGTCCTAAAATTAGCTCTTGTGTGTTTGCATCCATTTCCTGCTTCAAGGCCAAATATGCGGCAGGTAATGCAATACCTCGACAAGGACTTGCCACAGCCAGAGTTAGCACCAACACGTCTAGGTTTCAGCAAGCTACCTTTGATGCAAAACAAAGGATTTAATCCATCAGCCATGTCATATCCGGAGTTGAGGACGAGCATCGGCACATTCTCTGGCCTATCAGGTGGACGATGA</cdnaseq>

Protein Sequence

<aaseq>MEHPPFFLLLVSLGFNLIALCAGQNQFIYHGFTGKNLTIDGTTKITPEGLLELTSDKNDLNGHAFFPTPMHFRSSPNSTVQSFSVNFVFAIQSFYSDRSYDGMAFLIAPSNNLSTAWPDGYLGLFNISNRGNSSNHILAVELDTFQNNEFGDISNSHVGIDINDVRSVNSSFVGFYDDKNGIFTNLTLYNGRAMQVWMEYSKEATQITVTMAPIDKPKPKRPLLYATYDLSTVLIDPVYIGFSAATGVISTRHIVLGWSFGMGVPAPDIDITKLPKLPRVGTKPRSSVLEIVLPIASAMFIIIVGTMVILIVRRKLLYAELREDWEIDFGPQRFSYKDLFHATQGFKNKNMIGVGGFGKVYKGVLATSKLEIAVKKISHESRPRNEGVYNRDCSLDKYLHDVDNRAILNWAQRFQIIKDVACGLFYLHERWEKVVIHRDIKASNILLDAEMNGRLGDFGLARLYDHGTDPQTTHVVGTMGYLAPEMVQTGKASPLTDVFAFGAFLLETTCGQRPVKQDSQGNQLMLVDWVLEHWHDGSLTEAVDMRLQGDYNIDEACLVLKLALVCLHPFPASRPNMRQVMQYLDKDLPQPELAPTRLGFSKLPLMQNKGFNPSAMSYPELRTSIGTFSGLSGGR</aaseq>

Gene Sequence

<dnaseqindica>1..1177#1278..2008#ATGGAGCATCCTCCCTTCTTTCTGCTCCTTGTGTCGCTTGGCTTCAACCTTATAGCCCTTTGTGCCGGTCAAAACCAATTCATCTACCATGGTTTCACCGGCAAAAACCTCACTATCGATGGCACCACCAAAATCACACCGGAAGGACTCCTTGAGCTGACTAGTGACAAGAATGATCTCAATGGCCATGCATTCTTCCCAACACCTATGCATTTCCGCAGTTCACCCAACAGCACCGTTCAGTCATTCTCGGTGAACTTCGTGTTCGCCATCCAGTCCTTCTACTCCGACAGAAGCTACGATGGCATGGCGTTCTTGATAGCCCCAAGCAACAATCTCTCGACTGCGTGGCCAGATGGGTACCTGGGTCTCTTTAACATCAGCAACAGAGGGAATTCAAGTAACCACATCCTCGCAGTCGAGCTCGACACCTTTCAGAACAATGAGTTTGGGGATATCAGTAACAGCCATGTTGGCATTGATATCAATGACGTCCGCTCCGTGAATTCCTCCTTTGTTGGCTTCTATGATGACAAGAACGGGATTTTCACAAACTTGACTCTGTACAATGGTCGGGCTATGCAAGTTTGGATGGAATACAGCAAAGAGGCCACGCAGATCACCGTGACCATGGCTCCCATTGATAAACCAAAGCCGAAGAGGCCACTGCTCTATGCCACCTATGATCTCTCGACTGTGCTCATAGACCCTGTGTACATAGGTTTTTCAGCTGCAACTGGCGTAATTAGCACACGACATATCGTGCTTGGCTGGAGCTTTGGCATGGGTGTTCCAGCTCCGGACATTGATATCACCAAACTACCAAAGCTACCTCGTGTTGGAACCAAGCCTCGTTCCAGTGTCTTGGAAATCGTCCTCCCAATAGCCAGTGCCATGTTCATCATCATTGTCGGCACCATGGTCATTTTGATTGTGCGGAGGAAGCTACTGTATGCTGAGCTACGAGAAGATTGGGAGATTGATTTTGGGCCTCAGCGGTTTTCATACAAGGACCTGTTCCATGCCACTCAAGGATTTAAGAACAAAAACATGATTGGAGTAGGTGGATTTGGGAAAGTCTATAAAGGAGTCCTTGCGACATCCAAATTGGAGATTGCCGTGAAGAAGATCTCCCATGAGTCGAGACCAAGGAATGAAGGAGTTTATAACAGAGATTGTTAGCATTGGTCGTCTTCGACATCGCAACCTTGTGCCACTACTTGGCTACTGTCGACGGAAGAGTGAACTACTTTTGGTCTATAACTACATGCCAAAAGGTAGTCTTGATAAGTATCTACATGATGTAGACAATAGGGCTATACTTAATTGGGCTCAAAGATTTCAGATAATTAAAGATGTTGCATGTGGATTGTTCTATTTGCACGAGAGATGGGAGAAAGTTGTTATACATCGAGACATAAAGGCAAGCAATATACTCCTTGATGCTGAAATGAATGGGAGATTAGGCGACTTTGGGCTTGCACGACTATATGATCATGGTACTGACCCACAGACTACACATGTGGTTGGCACCATGGGCTACCTAGCACCTGAGATGGTACAGACAGGTAAGGCATCCCCTCTCACAGATGTGTTTGCTTTTGGCGCATTCCTTCTTGAGACCACTTGTGGACAAAGGCCAGTGAAACAAGACTCTCAAGGCAACCAACTTATGCTGGTTGATTGGGTTCTTGAGCATTGGCATGATGGATCTCTCACTGAGGCAGTGGACATGAGACTCCAAGGTGATTATAACATTGACGAGGCATGCCTAGTCCTAAAATTAGCTCTTGTGTGTTTGCATCCATTTCCTGCTTCAAGGCCAAATATGCGGCAGGTAATGCAATACCTCGACAAGGACTTGCCACAGCCAGAGTTAGCACCAACACGTCTAGGTTTCAGCAAGCTACCTTTGATGCAAAACAAAGGATTTAATCCATCAGCCATGTCATATCCGGAGTTGAGGACGAGCATCGGCACATTCTCTGGCCTATCAGGTGGACGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030117