BGIOSGA030168

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Revision as of 09:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030168| Description = Abi3-interacting protein 2| Definition = Oryza sativa Indica Group BGIOSGA030168, complete gene.| tag = OJ1695_A02.7|...")
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Gene Name

BGIOSGA030168

Description

Abi3-interacting protein 2

Definition

Oryza sativa Indica Group BGIOSGA030168, complete gene.

LocusTag

OJ1695_A02.7

Ensembl Transcript ID

BGIOSGA030168-TA

Ensembl Protein ID

BGIOSGA030168-PA

Length

4636

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:3303409..3308044

Sequence Coding Region

3307003..3308044,3305237..3305406),complement(3303409..3303825

Genome Context

<gbrowseImage1> name=IndicaChromosome09:3303409..3308044 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:3303409..3308044 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGACATGGAGTCCATGACAGCCCTTATGGAGTCTACAGGCTCCAAGCTGCAGCTGCTTCAGCGTGCATTTGCCGAGCTTGAGAGCCAGAGTGCTGTTTCATTGAACTTAAAGTGGAAGCAACTTGAGGACCATTTCCATGGCCTTGAGCAGTCGCTTAAGAAAAAGTTTGATGAGCTGAAAGAGCAGGAAAAGGAGTTCAAGGAGACAGTCACGAAATCGGAGCAGATGCTTGAGCAACAAGAGGCTGCTGTCGTGGCAAAGGAACTGACTTCTCTTGAAAGACTGCAGCAGAAAAGGGATGCTGCGTTGGCTATGATCTTCGGCAAGTCAAAGCTGAACTTGTCTATGCCTGTAATCAACCCAATCAGCAAATCTGTGAGTAACAATGCTGTGTTAAATGGCAACATCGCTAGCCTGTGGCCCAAACCTGCAACTGCGCATGGTGCATACCTGCAAGATGGAAACACTGCTGTGAAGCCTCGTTCTCAACTTGTTATCCTCTGTGAAGAAATGAATGTTAACGGGCTTCATAAGTTCATATCAGACAATCGCAAAGACTTAACATCCATCCGTGAGGAAATTCCCGTTGCACTTAGGGGAGCAACTGATCCATATGGCTTGGTGTTAGCTTCTCTAGAAGACTTCTATTTTGGAGACAATCTTATATTGGATGGTAAAAAGGATGGAAACCTTCTGGGTGTACGGAGGACGTGCCTCATGTTGATGGAATCACTTGCTCAGCTGCAAACTGATGCTACTACTGGTTTCATATCAAAAGGCCAAATGCTTACTGCTAGTATTAAGGAGAGAGCGAAAAAGATAGCGCTTGAGTGGAAATCCAAGTTGGATAGCCTTGACTTTGATGCTAGCAATGGGAACTGCCTGGAAGCACATGCGTTTCTTCAACTCCTGGCTACCTTTGCTATATTTTCTGAATTTGCGGAAGACGAGCTGTGTAAGCTTCTCCCATCAGTCAGTCGTCGTCGCCAGACACCTGAGCTTTGTAGAATACTTGGGTTGTCACAGAACATGCCAGGTGTCATTGGAGTTTTGATTGAAAATGGGAGAACTATTGATGCAATTAATTTGGCTTATGCATTTGAGCTGACTGATCAGTTTGAACCAGTCGAATTACTGAAAGCTTATCTGAAGGAGGTCAAGAGTATGTCACATGTCAAGACCGGAAAGATGTCTCCGGGAGTACAGAATGAAATTAATGAACGCGAGTTGTCTGCCTTGAAGGCTGTTATCAAATGTATTGAGGAGCACAAACTTGATGAGAAATATCCTATCGACCCACTTCAGAGAAGAGTCATCCAGCTAGAGAAAGCCAAGGCAGACAAGAGGAGGGCTGTTGAAGCTGGAAAGCCACAGTCTAAGAGGCCTCGTGCCAACGGATCAGTATATGCGCCACATATTACTAGCTTTTCTGACAAAAGCTTCTACCAGGCCGCTGCGCCACAGAGGCATTCCTACCCTTACGAGAGGCAGTATGTATATGGTGCTGAGGCCCATCATCACCCAACAATGATAAGCTCAGCTCCCTATGGCATGTCACCTGCCCACACAACATACTATGGTAATGGCTATCAGGTTCAGTACCAGGTACCATATATCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MSDMESMTALMESTGSKLQLLQRAFAELESQSAVSLNLKWKQLEDHFHGLEQSLKKKFDELKEQEKEFKETVTKSEQMLEQQEAAVVAKELTSLERLQQKRDAALAMIFGKSKLNLSMPVINPISKSVSNNAVLNGNIASLWPKPATAHGAYLQDGNTAVKPRSQLVILCEEMNVNGLHKFISDNRKDLTSIREEIPVALRGATDPYGLVLASLEDFYFGDNLILDGKKDGNLLGVRRTCLMLMESLAQLQTDATTGFISKGQMLTASIKERAKKIALEWKSKLDSLDFDASNGNCLEAHAFLQLLATFAIFSEFAEDELCKLLPSVSRRRQTPELCRILGLSQNMPGVIGVLIENGRTIDAINLAYAFELTDQFEPVELLKAYLKEVKSMSHVKTGKMSPGVQNEINERELSALKAVIKCIEEHKLDEKYPIDPLQRRVIQLEKAKADKRRAVEAGKPQSKRPRANGSVYAPHITSFSDKSFYQAAAPQRHSYPYERQYVYGAEAHHHPTMISSAPYGMSPAHTTYYGNGYQVQYQVPYIH</aaseq>

Gene Sequence

<dnaseqindica>1..1042#2639..2808#4220..4636#ATGTCCGACATGGAGTCCATGACAGCCCTTATGGAGTCTACAGGCTCCAAGCTGCAGCTGCTTCAGCGTGCATTTGCCGAGCTTGAGAGCCAGAGTGCTGTTTCATTGAACTTAAAGTGGAAGCAACTTGAGGACCATTTCCATGGCCTTGAGCAGTCGCTTAAGAAAAAGTTTGATGAGCTGAAAGAGCAGGAAAAGGAGTTCAAGGAGACAGTCACGAAATCGGAGCAGATGCTTGAGCAACAAGAGGCTGCTGTCGTGGCAAAGGAACTGACTTCTCTTGAAAGACTGCAGCAGAAAAGGGATGCTGCGTTGGCTATGATCTTCGGCAAGTCAAAGCTGAACTTGTCTATGCCTGTAATCAACCCAATCAGCAAATCTGTGAGTAACAATGCTGTGTTAAATGGCAACATCGCTAGCCTGTGGCCCAAACCTGCAACTGCGCATGGTGCATACCTGCAAGATGGAAACACTGCTGTGAAGCCTCGTTCTCAACTTGTTATCCTCTGTGAAGAAATGAATGTTAACGGGCTTCATAAGTTCATATCAGACAATCGCAAAGACTTAACATCCATCCGTGAGGAAATTCCCGTTGCACTTAGGGGAGCAACTGATCCATATGGCTTGGTGTTAGCTTCTCTAGAAGACTTCTATTTTGGAGACAATCTTATATTGGATGGTAAAAAGGATGGAAACCTTCTGGGTGTACGGAGGACGTGCCTCATGTTGATGGAATCACTTGCTCAGCTGCAAACTGATGCTACTACTGGTTTCATATCAAAAGGCCAAATGCTTACTGCTAGTATTAAGGAGAGAGCGAAAAAGATAGCGCTTGAGTGGAAATCCAAGTTGGATAGCCTTGACTTTGATGCTAGCAATGGGAACTGCCTGGAAGCACATGCGTTTCTTCAACTCCTGGCTACCTTTGCTATATTTTCTGAATTTGCGGAAGACGAGCTGTGTAAGCTTCTCCCATCAGTCAGTCGTCGTCGCCAGACACCTGAGCTTTGTAGAATACTTGGGTTGTCACAGAACATGCCAGGTCAGTGCTATCATGGATTAATCATGCACCTAGTTCCGTTATGTATTGACCATAGGGGTTTTCTATTTGTCATTGTCACTCAGATTGCTAGAGAGCTTATTCTTACCACTTCAACATTTGTTCATATATGAATAGACTATATCATTGGATTTATTTTCTAGTTAGTGGCTGCAGCGAGAATATACCTAGAAGTAATCAATATTGCGACATTGCTGTTTAGATGATTTATATGGAAAATCTGAAGGCTGCTACTTATGTTTTAGTGGCTGCACATCTTAAACCCACTATCTAGTATCTGTATTGTTCTTACTGGCAACAAAATTCGAGCAGCTTCTAACGCTGCGTTCGAATTATGGACTTTCCTCTCACGCACGAAAAACGAGGGTGGTTTATTAGCACATGATTAATTAAGTATTAGCTAAAAATGAAAATTAGATTAATATGATTTTTAAAGCAATCTTCCTATATATTTTTTTTGAAAAAAAAAACATAAAGTTTAGCAGTTTGAAAAGCATGCGTGCGGAAACGAGGTAGTAGAAGTTGGGAAGGGGGAAGAAAGAACACCCTAAGGCTGTGTTTGATACTTGGGGTTGGGAACCCAACTCCACCGCACGGAAAACGGAGCGGTCCATTAGCGTGTGATTAATTAAGTATTAGTTAATTTTTTTTCAAAAATGGATTAATTTGTTTTTTTAAAGCAACTTTCGTATAGAAACTTTTTGCAAAAAAACACACCATTTAGCAGTTTGAAAAACGTGCACGCGGAAAACGAGGGAAAGGGGTTGGGAAACTTGTGGAAAGAACGCAGCCTAAGCATGCTAGTGCATGGTCTAACCAGCTCAATTCAGGACTCAGGAGATCTTAATGTCACAGGATGTTAGTTACTAACTTCCGAATAATATATGTAATTGCATATAGTATATATTGGATTATAGCAAGCTAATACGACTTTATTCAATCCCTTTTTGGTTGAATTTGTCCTCCCGTTTGATTATTTACTGGGATGTGCTGTTGTGCATCTCTTTTAGAAAAAAAAAATACACATATATGAGTATTATGGTTAATGTTATGTAGTGGCAAAATGCATTAGACCTTAAAAGATGAATCAATCAAGAGTTGGCACCGACATGGTTTTGAAATATATAACCGTGGAATTGAACGATTCAACTTTTATGCTGGCGCTGATTTACACATCTATCAGTTTGCCTAAGATTTTAAACTTTCTCAAAGAGTTGTACAGAAGCAAGGCCCTAGTTCGTGATATGTTGTTACAGCTTGTATAGCTCCAGCAATTAAGCAATCTAAAATTATTATAATCACATACATGAATGATGATTTTTGTATGGTTTGAACAAGCATATTGCTTATTGTTTAGCTGCTGCTGTATCTGCTTTTGTTTTGACAGTTTCAACAGTCATTGCAACTGAACATTATTTTTTGTGCAATATTTGTTTGCCTCACCCTTTGCTCCATTCTTTTAATTTTGTCTTTCGTCTTTTGTGCCTTTTCCCCTCTTGCATGCTCTTTTCGTTTTTACAAGTCAGCAACATTTGTTCATGACAATTAAGTCCTCATGTTCATGTTTCTGGACATCAGGTGTCATTGGAGTTTTGATTGAAAATGGGAGAACTATTGATGCAATTAATTTGGCTTATGCATTTGAGCTGACTGATCAGTTTGAACCAGTCGAATTACTGAAAGCTTATCTGAAGGAGGTCAAGAGTATGTCACATGTCAAGACCGGAAAGATGTCTCCGGGAGTACAGGTACACTTTTTTCATTTCAATTTTCAGAGTTCAAGATCCAAGTCGGGAGCTGAGTAACCCTGGTCTACTTTGGTTTAACAAAAAGTGCATTATTTAATTTGGATCCAAAAATTATCATTCAGAATTTTGAAACTTGAAATTCTGTAAAAACTTAGTATTAAATCATTGTAAGTCTCTCCTTGAAAATTGAAGTTGAAGCGTCTTAAAGACAAGATTACTTGTAGCTTGTAGCAATTCTGTTCGATAGATCAGTTGGCATGCCACTTATTTAGTATTCGTTGCCAAGCATATAATATCCATTAATACAATAAAAGAAGATTTTTGTGCAAATCATTATAATATTGCACTGGAGCAATAAATTCGTTCACTATATTCTAGTGTTTTCATGCTCATTTTTCCTGTAGCACCATGACATCCTGCCATGATGATCCATGAAATGCTCCTTATGCTGCATACCTCAAAATGGCAGCCAAAATTAGGATAAGGAGATTGTGCCATAACTTCCTGTTCCTGGGATTGACTAGTTTGGATGGGATTTTGCCTGGATCCAGGGAAAGGAATCTTGCGTATTACTAATTAAATTTGTACCAATTCTCTTAAGGAGATCTGAACTACATGAAAGTTCATTTTCTTCAGCTCTGCATTCCTTTCCCACCATAACCAAGGTTTATCCAGATTTTTTTTAACAGGGAAGCTAATCGTTAGATTATGTTTTAATAGTTTGCTCAGTGTACTTCTTAATTTCCTATTCTGGAATACTACCTCCGTCCCAGAATATAAGAATTTTTAGGGTTGAACACGGTTATTAAGAAAGTAGGTAGAATTAAATGGGAGAAAGTTGTGATTGGATGAGAAGTGGAGGTTGGTGGGGAAGTTGAATGGTGGATGGTTGTGATTTGTTGGGAAAAAAATATTGGTAGATAAGTTGTTATTTTTTGGGACGGAGGGAGTAAAGTTAGCAAATTATTTAGACGCCAATCAGCTTCAGTATAGAAGCTTGAATGTCATTCTGAAGAACTTGAATAATAATAATATCTCGACCCTTAGGGGAGAGACATCCTGAAGGCATCTCATTTGAGGTCGAGAAAAGGCCCTGAAAGCTGGCTAACCCATATGGGGACTTTTTGTTGTCTTGACCCGTGCTTTAGGGGAACATGCAGAGGGCCTTTTTTTGGAGCCCTGGTTGGTAGCCTCACAACTGGAGGACTTACCATGTTTTCAAGAACTTGAACAATAAAGAGCTATCTTATCTTGCAAGATATTAAGCTAGTTGCCTGCTAATTTTACTTTCTCGAGTGGCGTAATTAATATTCTTTCTCTTCTTGCTGGTCTGTGCATTCTTGAGCATATCTGCATGCATTCCTAATTGTTATGTTTTGTATTACATCTGATGAATTATCATATAATGCAGAATGAAATTAATGAACGCGAGTTGTCTGCCTTGAAGGCTGTTATCAAATGTATTGAGGAGCACAAACTTGATGAGAAATATCCTATCGACCCACTTCAGAGAAGAGTCATCCAGCTAGAGAAAGCCAAGGCAGACAAGAGGAGGGCTGTTGAAGCTGGAAAGCCACAGTCTAAGAGGCCTCGTGCCAACGGATCAGTATATGCGCCACATATTACTAGCTTTTCTGACAAAAGCTTCTACCAGGCCGCTGCGCCACAGAGGCATTCCTACCCTTACGAGAGGCAGTATGTATATGGTGCTGAGGCCCATCATCACCCAACAATGATAAGCTCAGCTCCCTATGGCATGTCACCTGCCCACACAACATACTATGGTAATGGCTATCAGGTTCAGTACCAGGTACCATATATCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030168