BGIOSGA030175

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Revision as of 09:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030175| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030175, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030175

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030175, complete gene.

LocusTag

OSJNBA0069P02.20

Ensembl Transcript ID

BGIOSGA030175-TA

Ensembl Protein ID

BGIOSGA030175-PA

Length

3211

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:3040840..3044050

Sequence Coding Region

3044017..3044050,3043660..3043775),complement(3043415..3043533,3043231..3043294),complement(3043080..3043147
,3042527..3042585),complement(3042258..3042417,3042118..3042137),complement(3041885..3041931
,3041240..3041320),complement(3041068..3041157,3040840..3040968

Genome Context

<gbrowseImage1> name=IndicaChromosome09:3040840..3044050 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:3040840..3044050 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCTGACTTCAAGGCAATCCCCTTGATCGACATTAGTCCCCTTGTCGGAAAGATTGATGATCCGAGCATGGTCAATGACGAGGATTTGCTGCAAGTTGTGCAAATGTTGGACGATGCCTGCAGGGAGGCTGGATTCTTTTATGTGAAAGGCCATGGGATTGCTGACTCGCTAATGAAGCAAGTTAGGGATGTGACACAGAAGTTCTTTCAGCTTCCTTATGAGGAAAAACTCAAGATTAAAATGACACCTCAGAGTGGATACAGAGGGTACCAAAGAGTTGGTGAAAATATTACCAAGGGTAAACCTGACATGCATGAAGCAATTGATTGCTACACGCCTATTGAACCTGGTAAATATGGAGACCTTGCTAAACCAATGGTAGGATCTAATTTGTGGCCCAAATATCCATCAAATTTTGATGTACTGCTGGAAAACTATATCAGCCTTCTAAGAGATCTTTCAAGAAAGATCATGCGAGGTATAGCCTTGGCGTTGGGTGCGCCAGTTGATGCTTTTGAAGGTACAACCGCAGGAGATCCTTTTTGGGTTTGCAGGCTGATTGGTTATCCTGTATCAACTGATATTCCAGAAGAGCAGCGCACTGATACTGGGTGTGGAGCTCACACAGACTATGGTCTTCTGACATTGGTTAATCAGGATGATGACATATGCGCCCTTGAGGTCAGAAACCAATCAGGTGAATGGATATATGCCAAACCAATCCCAGGAACCTTCGTCTGCAACATCGGTGACATGCTGAAGGTTTGGTCAAACGGAATATATCAGCCAACACTTCATCGAGTTGTTAACAACTCCCCTCGCTACCGTGTATCTGTTGCATTCTTCTATGAGTCAAACTTCGATGCTGCCGTAGAGCCTGTTGAGTTCTGCCGGGAGAGAACAGGTGGTGTTGCCAAGTATGAAAAGGTTGTGTACGGAGAACACTTGGTTCAGAAAGTCTTGACAAACTTCGTCATGTAA</cdnaseq>

Protein Sequence

<aaseq>MGSDFKAIPLIDISPLVGKIDDPSMVNDEDLLQVVQMLDDACREAGFFYVKGHGIADSLMKQVRDVTQKFFQLPYEEKLKIKMTPQSGYRGYQRVGENITKGKPDMHEAIDCYTPIEPGKYGDLAKPMVGSNLWPKYPSNFDVLLENYISLLRDLSRKIMRGIALALGAPVDAFEGTTAGDPFWVCRLIGYPVSTDIPEEQRTDTGCGAHTDYGLLTLVNQDDDICALEVRNQSGEWIYAKPIPGTFVCNIGDMLKVWSNGIYQPTLHRVVNNSPRYRVSVAFFYESNFDAAVEPVEFCRERTGGVAKYEKVVYGEHLVQKVLTNFVM</aaseq>

Gene Sequence

<dnaseqindica>1..34#276..391#518..636#757..820#904..971#1466..1524#1634..1793#1914..1933#2120..2166#2731..2811#2894..2983#3083..3211#ATGGGTTCTGACTTCAAGGCAATCCCCTTGATCGGTAAGATTCAGATTCAGATTCTGGAATCCTGCGTGGGATTCTTTTTTTTCTTTTACCTGCTTTGCCACCACCAGTTGCAGTTAGTTCAATTAACCACAGATTACGACTGCTTGTCTGCAAAGGATACTAGATACAGCTTTTGTAGAATTTTGTGTAAAGATACTTGGTGGGATGAGATGATATATGCTTGTACTTTGAAATCTCCATTTGAAGAATTCCTCTATCTTTGTTCATTTGTCAGACATTAGTCCCCTTGTCGGAAAGATTGATGATCCGAGCATGGTCAATGACGAGGATTTGCTGCAAGTTGTGCAAATGTTGGACGATGCCTGCAGGGAGGCTGGATTCTTTTATGTGGTAAAATTTACTTATTTACTTACTAGCCTACTTCAGACTTTTTAGCATCAGTTTACTACAATGGGTACAACAGACTAGCTACACAATATCAATCCTAATCAAATGGTGTCTGTATGTTACTAACAGAAAGGCCATGGGATTGCTGACTCGCTAATGAAGCAAGTTAGGGATGTGACACAGAAGTTCTTTCAGCTTCCTTATGAGGAAAAACTCAAGATTAAAATGACACCTCAGAGTGGATACAGGTGTGATATAAAATGACAGCTTCAACCTGTTTTTAAGTTTCCAACATTTTTCCTTGTTCCACATTGGATCCTTCTAATCCTCCTTCCTGTATAACATAACTTTGTTGTCTTTACTGTCAGAGGGTACCAAAGAGTTGGTGAAAATATTACCAAGGGTAAACCTGACATGCATGAAGCAATTGATGTAAGTTTAATTTTCTCTTTATTATTTTTTTATCATCCATTAATTTGTTCCTGAGTTAATACCTGGAAGAAAAAACATCACAGTGCTACACGCCTATTGAACCTGGTAAATATGGAGACCTTGCTAAACCAATGGTAGGATCTAATTTGTGGTATGTATCCAACTCTCCATCTCTGTTTTTTTCCTACAGCACTGTATTATTTGACATATGCGAGACAGATATTATGTACTTGACTTTGATATAAAACAATACCCCAGTTTTGATCTATTGCATATTTTAATAATACTCACAATATAAATAATTTAGCTTATAGCACACCTCTATTTGGAAGAATGTGAGGGAATAAAATTTATATTTACAATATTTTATCTAGTACCAACATGTATTATGTTACAATATGGGTAGAATTATGAATTATAGTAAAGAAAATAGAAGTTATGGCTACAATTGTACTTGCATACTTCAATGTATTTTTGTTACTAGAAGCATATTAAATAGTTGGTACTAGGTACCACAGAATTATTGCTTGTTGAATTACTTCAGCTATTACTGAAGAAGTTCTGAACTTTGGTAGACTGCCTTTGAGTATTTTAGGTCAGAGATCTATCAAAATTCAAATAACCGGTTCATTTATTTTTATGCAGGCCCAAATATCCATCAAATTTTGATGTACTGCTGGAAAACTATATCAGCCTTCTAAGAGGTTAACTTCTATACTTAGTTTAAATCTTTATTTGTGCATGTATGCTATTGATCCATTTATTATTTGTTACTTATGAGTGACAGCGTTTGTTATGAAAATTTACTTGTAGATCTTTCAAGAAAGATCATGCGAGGTATAGCCTTGGCGTTGGGTGCGCCAGTTGATGCTTTTGAAGGTACAACCGCAGGAGATCCTTTTTGGGTTTGCAGGCTGATTGGTTATCCTGTATCAACTGATATTCCAGAAGAGCAGCGCACTGATACTGGGTGGTGAGCAAATTGTATCTACGTTTTTATTTGGTAATATATCCTGCAAATCGTGTGTATTGAGTGTAGAGTCATCTGACACTGCTTTTCTTTTACATGGCATCCATTCTACGATCAATTCAGTGGAGCTCACACAGACTATGGTTAGTACATATCTTTCAAAAGTTCTGTTGGAATTGAACTCATATGTGGTAATACGCATATATGTTTCTTTGATTGATGTATTGTGGAAAGTTTGTTTTTTCTTTATTTGTGTTTTAATCCTAAAAAATCAGTAGAGGTTATATCAAAACCATGGGGATCATATTTATCATTTGTTAAATTTGTAGGTCTTCTGACATTGGTTAATCAGGATGATGACATATGCGCCCTTGAGGTACTTATTTCTTCACCATCTAATACATATCTTATAGGAATAAGTCATGTCTTTGCCCTCGAACTCTACTCAGATTCCAATTTTCAATGTGGATTTAAAAAACTGGTTGTTTATCACCAGAAATCTGGACAAATATCATTGGTTACCCTATTCAGAGATTGTTTTAATTGAGATATTTTATGGCCACACTGTTTGTTTGCTTGGTGGCCTTTTCTCCTTGCAATTTCTTATCGCCAAAGTTATTTCCATGTTATCTCTGTCTAGTAATAAAGAAGAGGGGACGTAGAATGGATAGAAGATAAGAACTTGATTTCAGATTGTTTTATTTTTCATTAGAGTGCAGTGCATCTGAGCTGGGCATCTTTGTACAGAATTTGACTCATATAACCTAACAAGAGATACTTCTCTACTTTTCTAACATTCTACACATCTTCTAAGATGCATTAGTAATTAGGAGTATGCAATTAGCATCTTACAGTTTCTTCCCACTGTCCATATTTAGCCTGAAACAGGGTGAAGCAAACAATTTTGATCCGTTTGTAATATCTGGTGAATATGTTTCAGGTCAGAAACCAATCAGGTGAATGGATATATGCCAAACCAATCCCAGGAACCTTCGTCTGCAACATCGGTGACATGCTGAAGGTTCTTTTCTTCCTTTGCAGTTTCACTGATATCTTTATGGTCATCAAACATGAGACGCTTATCAATTGTCTTCTTTGGTTAGGTTTGGTCAAACGGAATATATCAGCCAACACTTCATCGAGTTGTTAACAACTCCCCTCGCTACCGTGTATCTGTTGCATTCTTCTATGAGGTATGTCTTGCTTAATCTCTAGTCTGAATCCTACACATAGTTTATGTGAAGTTGATTTCTCATGTTCTTTCTTTTCTTTCTGAATTTTGAATGCTACAGTCAAACTTCGATGCTGCCGTAGAGCCTGTTGAGTTCTGCCGGGAGAGAACAGGTGGTGTTGCCAAGTATGAAAAGGTTGTGTACGGAGAACACTTGGTTCAGAAAGTCTTGACAAACTTCGTCATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030175