BGIOSGA030188

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Revision as of 09:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030188| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030188, complete gene.| tag = P0406E0...")
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Gene Name

BGIOSGA030188

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030188, complete gene.

LocusTag

P0406E03.34-1

Ensembl Transcript ID

BGIOSGA030188-TA

Ensembl Protein ID

BGIOSGA030188-PA

Length

2544

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2284898..2287441

Sequence Coding Region

2285736..2287441,2285487..2285613),complement(2285273..2285374,2284898..2284948

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2284898..2287441 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2284898..2287441 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGAGCCTGGAGACCCTGGATGTACCATTAGCACATAGCGATATGAATGGAAGCTCCACTGTCCAGGGAGAACCTTCAGATGAAAATGAGTTGATTGTAGATGACTTGGACGCCATTTGGAATGAATTAAATACCAGTCTTCATGTTTCAAGATATGTTACTGACTCTGTTATGAAGGGAACTATAAGTGCTGTAGAGCAAGAATCAGCTCGCCAGATTGCATCTAAGGATGCAGAGATAGCATTCTTGAACGAAAAGCTGCATCAATTCAGAAATAGTGGCCTGAGTTTATCTGAGGGCCGAGATAAACTCTATGAAGAAATTTATAACCTTCGCCAACAGCTTGTGACTCTTTCTAAGTCACTCTTGAATTCTGAGTGGGGGCTTTCAGTATCACACTATAACAACTTTGAAGGCGCAGAAGATGAAAGTAAGCATAGAGGGAATGAAAAATCCTCTAAAGATGGTATAACTAAGGAAAATGGTTCTAAAGCCTCCAATGAAGATATTTTTATTGATCCAACAGTTCTGAAGCACATGGATAGGGATGAGTTGGTAGCCCATTTCAATAAAATGATGAATCAAATGAAACGGCAGCATGATTCGACTTTGCAAGAGAAGACGGAAGAGATATTTAGACTAAAGCGGGAGAACCTAAAAAAAGAAGGACCTAACCCCTGGCATTTACGCAATAATAAAGAATTTGAGCTCATGAGGAAGAAAATTTGGGAAGTTATTACAAAATTGGATGAGGTCCTTGTGGAGAATAAAAGAACCATCCGCATCAAGAGTGATGTATTTCCTGGTCAACAAGACAAAATCAAGGTTGTAGATTCTCACAACCATCAGTTGCAAGGTGCTCCAACTGACAATGAAGAGGAAGAATGCACTACTCTAATTAAGGCTTCACATTTCACACCCATTGAGACAAATTACCTGAATCAGATTAGGAGGTTAGAATCTGATATTGAAGATGCCAGCATTGTAACCATAGTTAGAGAAGAGACAGAAAAGATTTTAGTAACAGAGTTTATTAGTGAAATAAAAATGGGATTGCATGGTTATGAGATGGAGTTTAATATGAATCTGGACTTTTGGTCAATTATTCAGAAAGAGGCCATAGCTGAAGCAGCTTCAAACATTAATTCATTTTTGTTAAAATACAGCGAGGAAAACAGCTGTGCTGAAGCACAATCTCTACATATGCAAGAGATGGACAAATTAAAGCTAAATGTGGATACCTTCAATTTAGTGATAAGGGAGAAGGAGGAATATTTGTCACAGATTGAATTCAAAGCAATAGAGGATCATTTGGATTTTCTACGCCATGAACTTGATTCACTAAGAGGCAAAGTTGCAAAGCAAGATTCCTGCATTTCTGATAAGTGCAGGGATTTTGATGTCATTGTTAGCAGGTTGGAGCAAGCTCTGCAGCATGTTCATCGTAATGAGATTGCTCTGAAGGAGTTAAATGATAGATTTAGGACTGTATCAGATTCTCAAAAGGAGGTAGAGAAACAAAATAAAGTTTTACATGCCATCATTAAAGAAAAGGAGAAGGGATTTTCATCATCCATTTCTAAAGAAAAGGAGTTTACAGAATGCATGAGATGTGTTGTTGAATCTATGAGAGGTTTTGAAAAGCTTGTTACAGACCAACAAACTATCATTGCACACAAAGTTCAGCACAATGAATCAAGGTTTAGTCTATTGAAAGAACAATGTAAAATCCTTGCAAAAGAAGGCAATACTTTAAGAAAGAAGGCATTGAGATACAAGGAAATATCTGAAACAAGAGCCTCCAATCTTCAGAAAGCTGAGCTCGAGGTAGATTTACTTGGTGATGAGGTTGAGGCATTAACAGATCTTCTTGCAAAAATTTATATTGCCCTCGATCACTATTCTCCTGTCTTGCAGTACTACACTGGTGTTATGGAGATCTTGAACATGATCAAGAAACATTTAAACATGTCGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MAESLETLDVPLAHSDMNGSSTVQGEPSDENELIVDDLDAIWNELNTSLHVSRYVTDSVMKGTISAVEQESARQIASKDAEIAFLNEKLHQFRNSGLSLSEGRDKLYEEIYNLRQQLVTLSKSLLNSEWGLSVSHYNNFEGAEDESKHRGNEKSSKDGITKENGSKASNEDIFIDPTVLKHMDRDELVAHFNKMMNQMKRQHDSTLQEKTEEIFRLKRENLKKEGPNPWHLRNNKEFELMRKKIWEVITKLDEVLVENKRTIRIKSDVFPGQQDKIKVVDSHNHQLQGAPTDNEEEECTTLIKASHFTPIETNYLNQIRRLESDIEDASIVTIVREETEKILVTEFISEIKMGLHGYEMEFNMNLDFWSIIQKEAIAEAASNINSFLLKYSEENSCAEAQSLHMQEMDKLKLNVDTFNLVIREKEEYLSQIEFKAIEDHLDFLRHELDSLRGKVAKQDSCISDKCRDFDVIVSRLEQALQHVHRNEIALKELNDRFRTVSDSQKEVEKQNKVLHAIIKEKEKGFSSSISKEKEFTECMRCVVESMRGFEKLVTDQQTIIAHKVQHNESRFSLLKEQCKILAKEGNTLRKKALRYKEISETRASNLQKAELEVDLLGDEVEALTDLLAKIYIALDHYSPVLQYYTGVMEILNMIKKHLNMSK</aaseq>

Gene Sequence

<dnaseqindica>1..1706#1829..1955#2068..2169#2494..2544#ATGGCGGAGAGCCTGGAGACCCTGGATGTACCATTAGCACATAGCGATATGAATGGAAGCTCCACTGTCCAGGGAGAACCTTCAGATGAAAATGAGTTGATTGTAGATGACTTGGACGCCATTTGGAATGAATTAAATACCAGTCTTCATGTTTCAAGATATGTTACTGACTCTGTTATGAAGGGAACTATAAGTGCTGTAGAGCAAGAATCAGCTCGCCAGATTGCATCTAAGGATGCAGAGATAGCATTCTTGAACGAAAAGCTGCATCAATTCAGAAATAGTGGCCTGAGTTTATCTGAGGGCCGAGATAAACTCTATGAAGAAATTTATAACCTTCGCCAACAGCTTGTGACTCTTTCTAAGTCACTCTTGAATTCTGAGTGGGGGCTTTCAGTATCACACTATAACAACTTTGAAGGCGCAGAAGATGAAAGTAAGCATAGAGGGAATGAAAAATCCTCTAAAGATGGTATAACTAAGGAAAATGGTTCTAAAGCCTCCAATGAAGATATTTTTATTGATCCAACAGTTCTGAAGCACATGGATAGGGATGAGTTGGTAGCCCATTTCAATAAAATGATGAATCAAATGAAACGGCAGCATGATTCGACTTTGCAAGAGAAGACGGAAGAGATATTTAGACTAAAGCGGGAGAACCTAAAAAAAGAAGGACCTAACCCCTGGCATTTACGCAATAATAAAGAATTTGAGCTCATGAGGAAGAAAATTTGGGAAGTTATTACAAAATTGGATGAGGTCCTTGTGGAGAATAAAAGAACCATCCGCATCAAGAGTGATGTATTTCCTGGTCAACAAGACAAAATCAAGGTTGTAGATTCTCACAACCATCAGTTGCAAGGTGCTCCAACTGACAATGAAGAGGAAGAATGCACTACTCTAATTAAGGCTTCACATTTCACACCCATTGAGACAAATTACCTGAATCAGATTAGGAGGTTAGAATCTGATATTGAAGATGCCAGCATTGTAACCATAGTTAGAGAAGAGACAGAAAAGATTTTAGTAACAGAGTTTATTAGTGAAATAAAAATGGGATTGCATGGTTATGAGATGGAGTTTAATATGAATCTGGACTTTTGGTCAATTATTCAGAAAGAGGCCATAGCTGAAGCAGCTTCAAACATTAATTCATTTTTGTTAAAATACAGCGAGGAAAACAGCTGTGCTGAAGCACAATCTCTACATATGCAAGAGATGGACAAATTAAAGCTAAATGTGGATACCTTCAATTTAGTGATAAGGGAGAAGGAGGAATATTTGTCACAGATTGAATTCAAAGCAATAGAGGATCATTTGGATTTTCTACGCCATGAACTTGATTCACTAAGAGGCAAAGTTGCAAAGCAAGATTCCTGCATTTCTGATAAGTGCAGGGATTTTGATGTCATTGTTAGCAGGTTGGAGCAAGCTCTGCAGCATGTTCATCGTAATGAGATTGCTCTGAAGGAGTTAAATGATAGATTTAGGACTGTATCAGATTCTCAAAAGGAGGTAGAGAAACAAAATAAAGTTTTACATGCCATCATTAAAGAAAAGGAGAAGGGATTTTCATCATCCATTTCTAAAGAAAAGGAGTTTACAGAATGCATGAGATGTGTTGTTGAATCTATGAGAGGTTTTGAAAAGCTTGTTACAGACCAACAAACTATCATTGCACACAAAGTTCAGCACAATGAATCAAGGTGCCTGTATTTCCATTCATCCAGTAGTTTCTTTTGTCTTTATTTTGGGTTTGCTTATGCTGTATTTATATTTACAATTCTTATTGTCTATGACTTTTCTTTGTTGAACTTATGCAAAACAGGTTTAGTCTATTGAAAGAACAATGTAAAATCCTTGCAAAAGAAGGCAATACTTTAAGAAAGAAGGCATTGAGATACAAGGAAATATCTGAAACAAGAGCCTCCAATCTTCAGAAAGCTGAGCTCGAGGTACATCTTTGGTTTCCAAACAACTGCTTATCCTAGAAACTGCACCAGTCAGTTACCTAGATAGTGCCTTTAAATGAGGAGGATTAGGAGTGTGATTTCTTGTTTTTTGCAGGTAGATTTACTTGGTGATGAGGTTGAGGCATTAACAGATCTTCTTGCAAAAATTTATATTGCCCTCGATCACTATTCTCCTGTCTTGCAGTACTACACTGGTGTAAGTATACTGTTCTTAGTACATCTCTGTTTTGATAGTGAAGTGAAATCTCTCTAAAGAAACAAAATTGATATAACATAATTTCTAATAGGAATTTCAATCCGAACTTCATTATTTTGTTTCCACAACTATGAAAACTGCTTCTTTACATTGAGTTTTATGTATGTTGAGGTCTAACTACTGGTCGTAGCATGCTATTGGATTAGGAATTGCTAGCATCCATCCAAATATAGCGTTATAAATTATGATGTTTCTATTCTTTACTAATTACTATATCGTTTTAAGTTGATATCTTTGTTCTCAATTGTGTTATCTCTTTAACAGGTTATGGAGATCTTGAACATGATCAAGAAACATTTAAACATGTCGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030188