Os10g0550400

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0550400| Description = Conserved hypothetical protein| Version = NM_001071850.1 GI:115483295 GeneID:4349315| Length = 1448 bp| Definition ...")
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Gene Name

Os10g0550400

Description

Conserved hypothetical protein

Version

NM_001071850.1 GI:115483295 GeneID:4349315

Length

1448 bp

Definition

Oryza sativa Japonica Group Os10g0550400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22048009..22049456

Sequence Coding Region

22048030..22048673,22048741..22049203

Expression

GEO Profiles:Os10g0550400

Genome Context

<gbrowseImage1> name=NC_008403:22048009..22049456 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22048009..22049456 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtcggtcgctcgcgccgcggcggcgcgcggcggaggcggcgatggcggcggcgcgcaacccacgaaaccctaggcgccgcggggccatcctcgccgcggtcgcccccttcctcgccttcgccgactacctcaggctccgcctcgtcgaccgcgcgtggcgcctctactgccgccgcgtcggccacgccccgccgcccttcccctggctgatgctccccgagcgggagtcgccgccgggggcgggggcggtggcgcgccgcgtgttctacgacgtgcccggcgggcggtcgtacgggtaccgggtgccctcgagggacatgcaccggtgcgtcgccacggggcacgggtgggtcgtcatggtcgccgtggacgcgccgcgccgcgtgatgctgctcaaccccatcaccggcgaccagaggatcgtggcgtggccgttcgccaggtggaacgcgcggttccacgccgtcctcacgtcgtctcccgccgccggcgaggcggggtgcttcctcgtggtggtcgcggacaggctcctcgccttctgccgccccggcgccgacttccaggggtgggagacgctgcgcgcgccggggttccgccaccacgcggccctcagcgacgtcgtcgccgtcggcgccacggtcgcagggacacggggttcgcgctcccgttcgctcgagctgaggcggcactacctcgtggagtcgctcggccacgtcctcctcgtgctctcggacgagcgccacaaccgcgtcgcgctctacaagctcaactgggacgcgagggcgtggctgccgatcgccgcctgccccggcgagcgcgtgctgctgctcggccgcgggtgctcggcggccgtcccgccttcctccgcggccggccgcgccccggggaccgtcctgttcgcgcaccagccgtcgacgctgcccgacgtggacgtcgccgcccgtggccaggcgtggttctggtcggagtcgagggtgggcgcggcgccgggtgatctgctggtgctgaagaagacggtgccgcaccgccatggcgagttccccgccgacggcgactcgttctggttcttcccagcagttgatccggatgaggacgcaaggtga</cdnaseq>

Protein Sequence

<aaseq>MRRSLAPRRRAAEAAMAAARNPRNPRRRGAILAAVAPFLAFADY LRLRLVDRAWRLYCRRVGHAPPPFPWLMLPERESPPGAGAVARRVFYDVPGGRSYGYR VPSRDMHRCVATGHGWVVMVAVDAPRRVMLLNPITGDQRIVAWPFARWNARFHAVLTS SPAAGEAGCFLVVVADRLLAFCRPGADFQGWETLRAPGFRHHAALSDVVAVGATVAGT RGSRSRSLELRRHYLVESLGHVLLVLSDERHNRVALYKLNWDARAWLPIAACPGERVL LLGRGCSAAVPPSSAAGRAPGTVLFAHQPSTLPDVDVAARGQAWFWSESRVGAAPGDL LVLKKTVPHRHGEFPADGDSFWFFPAVDPDEDAR</aaseq>

Gene Sequence

<dnaseqindica>22..665#733..1195#gggtcgcgtcgcgtgggctgcatgcgtcggtcgctcgcgccgcggcggcgcgcggcggaggcggcgatggcggcggcgcgcaacccacgaaaccctaggcgccgcggggccatcctcgccgcggtcgcccccttcctcgccttcgccgactacctcaggctccgcctcgtcgaccgcgcgtggcgcctctactgccgccgcgtcggccacgccccgccgcccttcccctggctgatgctccccgagcgggagtcgccgccgggggcgggggcggtggcgcgccgcgtgttctacgacgtgcccggcgggcggtcgtacgggtaccgggtgccctcgagggacatgcaccggtgcgtcgccacggggcacgggtgggtcgtcatggtcgccgtggacgcgccgcgccgcgtgatgctgctcaaccccatcaccggcgaccagaggatcgtggcgtggccgttcgccaggtggaacgcgcggttccacgccgtcctcacgtcgtctcccgccgccggcgaggcggggtgcttcctcgtggtggtcgcggacaggctcctcgccttctgccgccccggcgccgacttccaggggtgggagacgctgcgcgcgccggggttccgccaccacgcggccctcagcgacgtcgtcgccgtcggcgccacggtgtacctcgtcgacgagcggaggcggctgtggcgcgccgatctcgcggacgagaaccccaaggtgcagcgcagggacacggggttcgcgctcccgttcgctcgagctgaggcggcactacctcgtggagtcgctcggccacgtcctcctcgtgctctcggacgagcgccacaaccgcgtcgcgctctacaagctcaactgggacgcgagggcgtggctgccgatcgccgcctgccccggcgagcgcgtgctgctgctcggccgcgggtgctcggcggccgtcccgccttcctccgcggccggccgcgccccggggaccgtcctgttcgcgcaccagccgtcgacgctgcccgacgtggacgtcgccgcccgtggccaggcgtggttctggtcggagtcgagggtgggcgcggcgccgggtgatctgctggtgctgaagaagacggtgccgcaccgccatggcgagttccccgccgacggcgactcgttctggttcttcccagcagttgatccggatgaggacgcaaggtgaaaagcttcgattttttctcttcatgtattgtcaagcagctcaagcaaatcagggtaaagatagtgatagcatcatgactcagatgtgcatggtttagctctttagcctcttacagagtttacagttcagtgtcatatatgagtcctgcttctgcaattgtgatctcaagtgctaatcaattgtgtagagcttttgatactgttgtagcatgttaatctgcttctgcaatgcatattctctcgctttttttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0550400, RefSeq:Os10g0550400