BGIOSGA030214

From RiceWiki
Revision as of 09:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030214| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030214, complete gene.| tag = OsI_304...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030214

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030214, complete gene.

LocusTag

OsI_30416

Ensembl Transcript ID

BGIOSGA030214-TA

Ensembl Protein ID

BGIOSGA030214-PA

Length

4281

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1114491..1118771

Sequence Coding Region

1118556..1118771,1118115..1118426),complement(1117751..1117836,1116519..1116594),complement(1116311..1116385
,1116143..1116212),complement(1114491..1114924

Genome Context

<gbrowseImage1> name=IndicaChromosome09:1114491..1118771 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:1114491..1118771 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGAGGGGGAAGAAGCGGAAGGGAGAGGTTGAGTTGTCACACCCTGCCTTGGAAAGGGAGATTGTTCCAACCACGTCACCTCTACCAATCGCTATCCGCCGATCCACTCTGGAGTCCGGCGAGGGCTCCTCCGAGTCGGTCGCCTCAGACACGGGCACCGCCAAGGCTCTAGCCGACGACGTCGTGCACATCGCCAATGCCCTCTGTATGATGTCCGAACCGCGTGGTCGCTGGACCGATTTCGAGCTGCACGTGTTTCTTGAGAGTTGCTTGGAGGAGATGGCGGCATACAACAACACCTCGAACTCCCCCAAACCCAAGGCATGGGAGAACTTGGCGAAGAAAATGTTCACCAAGTGCAGGAAGAAGGTGACAAAAGAGCAATTGGAGTACATCTGGGGCAGTGCAAAGAAGCGGTTCCAGCTGTGGGTGTGGCTTGAATCGCAGGCAACCGGACAAGGCCGGGACCCCCTTACTTCAGCCATTGTCGCTGACGAAAGCTGGTGGGAAAGCCAAAATGGGGTGCCAAGTACATTTGTAAATGATCCAGCTGGTGAAGGATCATGCTGCTATCAAGTTTTTGGAGTTACTCATTTACTGCCATCACAGGTTGACTGCTCAAATAATCGCCTTACAGATCTCCCAGCTAGTCTTGCCAGTTGCCTGGAGTTGTCAGAACTCAATGCATCAAAGAACACTATATCCGTACTGCCAGATGAACTTGCTGGCTGTTCCAAGTTATTCAGATTGAATCTAGAGGGTAACAAGCTTGTGATGCTATCAGACAAGATGTTTCTGTCATGGACAATGCTTACAGAGATGAATGCTGCTCACAGCAGCGTACACTCCTCCACCACCGGCGCTGTCTCCATCAAAGGACATTATGCTCAGAGCAGTGGTAGTAAGGGAAAAAGGAAGGCATCAGAGGGTGATGCCTCTGGAAGTTCTAATAAGCGGTCCTGCAGCAGTGGTACTAGCGAGACGCTTGATAGGCTCGCTACCCTGCGCATGGCGTCCTTGGAGAGCCACGCAAGGGAACTAGCTGCAGCGAAGGCTACCGGCCCTGAGACTTGCATGGAGATGGTGGAAAATGATGGCCACCGTCCAGGTAGTCCAGTGTGGTATATGGCTGCGCGCTTGCTACGTGATGCAAGCAATGGCCACTACTTTATGTTCGCGCGCCTCACGGACGCAGCTGGGCACCTGCAATATATTTTAACTAGTGGAAACGGGCCTGGTTCTGCATCTGGTGGTTCGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MEARGKKRKGEVELSHPALEREIVPTTSPLPIAIRRSTLESGEGSSESVASDTGTAKALADDVVHIANALCMMSEPRGRWTDFELHVFLESCLEEMAAYNNTSNSPKPKAWENLAKKMFTKCRKKVTKEQLEYIWGSAKKRFQLWVWLESQATGQGRDPLTSAIVADESWWESQNGVPSTFVNDPAGEGSCCYQVFGVTHLLPSQVDCSNNRLTDLPASLASCLELSELNASKNTISVLPDELAGCSKLFRLNLEGNKLVMLSDKMFLSWTMLTEMNAAHSSVHSSTTGAVSIKGHYAQSSGSKGKRKASEGDASGSSNKRSCSSGTSETLDRLATLRMASLESHARELAAAKATGPETCMEMVENDGHRPGSPVWYMAARLLRDASNGHYFMFARLTDAAGHLQYILTSGNGPGSASGGSQ</aaseq>

Gene Sequence

<dnaseqindica>1..216#346..657#936..1021#2178..2253#2387..2461#2560..2629#3848..4281#ATGGAGGCGAGGGGGAAGAAGCGGAAGGGAGAGGTTGAGTTGTCACACCCTGCCTTGGAAAGGGAGATTGTTCCAACCACGTCACCTCTACCAATCGCTATCCGCCGATCCACTCTGGAGTCCGGCGAGGGCTCCTCCGAGTCGGTCGCCTCAGACACGGGCACCGCCAAGGCTCTAGCCGACGACGTCGTGCACATCGCCAATGCCCTCTGTATGGTGTGTGCCAAGTCCCCCAAAGCCGTTATCGAGTTCGTGTGTCGAATGAGCCTTGCCACCGTCAGCCGTTCAATTGACTTGTGTAGTTCTTTTCTCTCTTTCATTTTTTGTTGACTAGCATTTCAGTAGATGTCCGAACCGCGTGGTCGCTGGACCGATTTCGAGCTGCACGTGTTTCTTGAGAGTTGCTTGGAGGAGATGGCGGCATACAACAACACCTCGAACTCCCCCAAACCCAAGGCATGGGAGAACTTGGCGAAGAAAATGTTCACCAAGTGCAGGAAGAAGGTGACAAAAGAGCAATTGGAGTACATCTGGGGCAGTGCAAAGAAGCGGTTCCAGCTGTGGGTGTGGCTTGAATCGCAGGCAACCGGACAAGGCCGGGACCCCCTTACTTCAGCCATTGTCGCTGACGAAAGCTGGTGGGAAAGCCAAAATGGGGTATGTAACTCATCCACAAATTCATTTTGCAAACCAAATATCTTGCTACCATGGTGTTACCTTCATGTGTAATATGAACATAGGCAGTTAGGCTCAATTTTGAAGGCTTGAATTGACTGTTGAGTATCACTGACTAGCTCCTTGTAATAACAAATAGTGTTCTCCTGTAATTTAGAAGCTCCTGGTACATAATTTTGTTTGCTAGAACAGAATGATGCTGTCAACTTGGTCTTTCTTGGTTTTTAATAGTTCATAATTTCTTAGCTTCATAACTGTAGGTGCCAAGTACATTTGTAAATGATCCAGCTGGTGAAGGATCATGCTGCTATCAAGTTTTTGGAGTTACTCATTTACTGCCATCACAGTATAGACAATCCAGTGGGACAAAAAAAAAGAGAATGCAAACAGAGCCTCTTTAGATTCAACCATGGATGGGCCCTGTTTGCACAAAGGCAATTTTCATTACAACTTTGTTGTTTCTTGGATGAAATGGCATTTGCTTTCACTGCCCCCCTAGTTTTCATTGCCCATTTTCAAATTTATAAACTACCATCCAAAATGAAAAAAACTTTTCAGATATGTCGGAATAAAATTCAGTGCACTGAGAAGGGGAACACTTTGATGTGTGACTACAAGAAATATGACCTTCTGTGACGAATTTCTCGTGACATCGGAGCTATTCGTCATTAGCACATTCCATTTTATGACAATAAGTATAAGATGGGGTGGCTTAGTGACGAAAAAAAGGTGTTCGTCGTTAATACCAACTAGAAATCGTCATAAAGTATTTCAATGGGACATTGTGACGAATATTAATTTGTCATAAGCGGTAAAAGCAAACGTCACAGATTTATAATGCATTTCTAGAAAAATATATTAAAAGGTGAAGCAATTTAATCAAGTGAATTACTGAGGAAACTAAAATTTTTCTTTAAAAATCATGGCTGGAAATATTTTTTTAATATTCTATATGTTCTAAATTATTCTCTGATTTTTTCCGTGAATTTTCGGAGCTCAATAACTAATTTTAATACCACAAAGTTCATTTAACATATTAAAATAAATGGAAAACAAATTAAAATCCCTCTCTCCCCTTGGGCTTCTTCGGCCCAATTGTTACTTTCTCCCTCCTCAGCCCACAGCCTCTCTCTCTTCCTCCTCGGGCCGGCTTTCCCTTCCCCTCCTCCCTCTTTGGGCCACGGTCCAACCCTTTTGCTCCTCCCTCGCCGAGAAGTCCATTTTGCCTCCCTTCTCTCAATTCAAATAAGTTTTCAGGTAGTAAATAATTTTAAATGAAAAAATCTCAACAACAAAGTTATATAATTTATCAAGATCTACAAGTTTTGTTTTGTTCATTTTGCTATATGACTTTGTTTCAATAATTTGAATTTGAATTTCAAATTTGTCACATATTTTAGATATAATGATGTTGACAATTAGTATGATGTCTAAATACCAGAAGCAATGTTTGAGACTATATATGATTATATTCATGTAAGTTGATGCATTGTTGTTGTTAGGGTTGACTGCTCAAATAATCGCCTTACAGATCTCCCAGCTAGTCTTGCCAGTTGCCTGGAGTTGTCAGAACTCAATGTAAGCCACCATCGATGTATTCCTTATTTTCACCATAAGGTTTCTTTGTTTGATGAAAATATATACAGCTGTCATTTCTATAGCTTCCCTGTTCATCCTCTGTCCTAAACATAATGTAGTGCCCTACATGTAGGCATCAAAGAACACTATATCCGTACTGCCAGATGAACTTGCTGGCTGTTCCAAGTTATTCAGATTGAATCTAGAGGTATGTACTCCTTATAGAGAATGTCAAAGCTGCATCTATCATAGTTTCGTGCTGCATTTCTTTTGTTCTTGAAAACTCCAATTACTACAAAATGTCAGGGTAACAAGCTTGTGATGCTATCAGACAAGATGTTTCTGTCATGGACAATGCTTACAGAGATGAATGCTGGTATGCCACACAGCCACAGTAGCAAAAATAATGTCGAACCTATGTGATATCCTTGAGTTTATGCAATCTAGCTAGAAACTGCACTGAGCATCATTAATCTGGTATTGGCAGATTTTCAGTTCAGCTTATGGAAGGGACTTTGGGGGTGCTCTCATGGCAGTCGGTTTAGAGATTTGAAAGGATTGTGCTTGCCTAGGTGTGAGCAATTGGCTGGATTTGGCTGTTACCTGGGTAGTAAATTTTGTGTTGTATTGGATGTTTGTCGGGTTGTGTTAGATGCTATTGGGCTGTAGCCTTTGTGCTATATGTGTTGTTATTGTGTTTGATTGTTGGGTCTATATGGGCTTAGCCCACTTGTTATTTGATACTAATGTAAATGATAATATGATGGGCTGAAAATGGTGTGGTATAATATTTGGGCCTATATAGGCTTTTGCAATGGACTGGCCCATTTATTCATTCATTATTTGTTATTAAAGCAAATGGATATAATAGAATTGGGCTGAAATATGCTACATCTATGATGGGCTAGGCTAAAATCTAGTTGGGCTTGCCATTGGGCTAAGCCCATAAACATGGTGCTCAATACATGGATTTTAATGGGCCATCAGATACTTTATGACATTTTTTAGGCTAGATAATGACGAATATGAGCGTCACAAAGTTATGACGATAGAAGGATCGTCACTAGATTAATGACAAAAAAAATAAGGTTTCGTCATAAAACGCCATTAGAAACGCATGATAGGTGACGAATGAATTTTCGTCACGCGAGCGTCACAGTACGAAACGTGAAGAAATTTTATGTATTTGTGACGTAAATGAAGCGTCATCTATCGTAAGATTTCTTGTAGTGGAGGCTTATCTTGTTTCTTCCTTTCAATGTTTATAAATAGTGGTCGAGTCCTATGGCTATGATATATGTTAATCATGTCGCAAACTTCAGTAATAATTGTCATGCTGCCTATACTGTATTTATGTCCTCTTGTGTGTACTGTGCCTTTTCATATATTTGCTCTATAAAGTTCCATGTGTACAACTGTGTGACAGGTGAGGAAGGGTGTGATAGCCTTCAAAAACGATCCCCTGAAGCACATTGATCTTCATCATGCGGTGTTTAGCATGCGCACCGTTGTCCGCAACCATTCCGCCGTCGCTGGGGCTGCCCAAGGCACGCCGCAACAACCCATTCAGTGGCAGCCCATTGATGTCGAGCAGCTCACAGCAGCGTACACTCCTCCACCACCGGCGCTGTCTCCATCAAAGGACATTATGCTCAGAGCAGTGGTAGTAAGGGAAAAAGGAAGGCATCAGAGGGTGATGCCTCTGGAAGTTCTAATAAGCGGTCCTGCAGCAGTGGTACTAGCGAGACGCTTGATAGGCTCGCTACCCTGCGCATGGCGTCCTTGGAGAGCCACGCAAGGGAACTAGCTGCAGCGAAGGCTACCGGCCCTGAGACTTGCATGGAGATGGTGGAAAATGATGGCCACCGTCCAGGTAGTCCAGTGTGGTATATGGCTGCGCGCTTGCTACGTGATGCAAGCAATGGCCACTACTTTATGTTCGCGCGCCTCACGGACGCAGCTGGGCACCTGCAATATATTTTAACTAGTGGAAACGGGCCTGGTTCTGCATCTGGTGGTTCGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030214