BGIOSGA030234

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Revision as of 09:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030234| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030234, complete gene.| tag = P0646B0...")
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Gene Name

BGIOSGA030234

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030234, complete gene.

LocusTag

P0646B04.32

Ensembl Transcript ID

BGIOSGA030234-TA

Ensembl Protein ID

BGIOSGA030234-PA

Length

3491

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:713282..716772

Sequence Coding Region

716714..716772,716624..716654),complement(715185..715326,715003..715031),complement(713282..714043

Genome Context

<gbrowseImage1> name=IndicaChromosome09:713282..716772 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:713282..716772 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGTTGGCGTCATCGTGCTGCAGACTCCTACAACGAGCACATGGCCGATATGCGCTAAGGAGGATCAGGATGAGAGGATGGAGAGAAAACACAGAAAACTCCTCCCCATCAGAATCGATGAGACGGATGAGTTTAGGCAGGCCACGCACATTGCAAAATGGTTGCATAAACTCGGTGGGCTGCAGATCAAGCCATTCCCAATTGCCTCAACAGAGCAGTTGAAAGATGGCCAGTTGGAGAAAAATAAACTCAAGAATACATCACTGGAGTACGAATTTTCTTTGTTCCGTGCCACTCTGTCCCCTAGCGTCGGTCGCGCCGTCGTCCTTCATCCTCCCGGCGCCGCCGTCATCCGTCCGCCACTGCTTGCGCCAGCCACGTCGTCACCCATCCGTCGTTGCCATCGGTGCACACGGTGGAGGGCCGGAGGAGAGGGGAGCAGCGGTGGAGGACAGAGGGTGTCGAGCTCCGGCAGCGGTGGAAGGCAAAGAGCATCCAGCTCCGTTGTGTGGGTTGCTGATCAGTCGGCGCCCATCGCCGACCATCCTTCCTCCCCGGCTTCCATGCTCGCCATTGCCAGCGACGGCAACCTGGTCTTGTCCGATGGCGCCACCGGCCACGCCCTTTGGAGTACTAACGTCACCGCCGGTGTGAACTCGTCGGCGTCGGGAGGAGGCGGCGGTGCTATGGCGGTGCTCGCAAACTCTAGCAACCTCGTGCTCCGGCTGCCGGATGGCACCGCCTTGTGGGAGACGTTCGAGCACCCCAGCAACACATTCCTGCTCGGCATGAAGATCGGCGTCATCTACCGGACGCGCGGTGGCGTGCGGCTTGTCTCATGGAAGGGCACCACCGACCTGTCGCTGGGGAAATTCTCCTTCGGCAGCGACCCGGACCAGCCGCTTCAGGTGGTCATCTGGAAAGGCTCGCGCGTGTCCTGGCGTACCAACCCATGGGAGGGCTACATGGTGAACAGCAACTACCAGAAGGGCGGGAAGTCGGTGTGGGGAGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAVVGVIVLQTPTTSTWPICAKEDQDERMERKHRKLLPIRIDETDEFRQATHIAKWLHKLGGLQIKPFPIASTEQLKDGQLEKNKLKNTSLEYEFSLFRATLSPSVGRAVVLHPPGAAVIRPPLLAPATSSPIRRCHRCTRWRAGGEGSSGGGQRVSSSGSGGRQRASSSVVWVADQSAPIADHPSSPASMLAIASDGNLVLSDGATGHALWSTNVTAGVNSSASGGGGGAMAVLANSSNLVLRLPDGTALWETFEHPSNTFLLGMKIGVIYRTRGGVRLVSWKGTTDLSLGKFSFGSDPDQPLQVVIWKGSRVSWRTNPWEGYMVNSNYQKGGKSVWGG</aaseq>

Gene Sequence

<dnaseqindica>1..59#119..149#1447..1588#1742..1770#2730..3491#ATGGCGGTGGTTGGCGTCATCGTGCTGCAGACTCCTACAACGAGCACATGGCCGATATGGTTTGCTTTGATGCTGCGTGTTCAGGTTTATTGATGACTTGATTTGGCTGTGGATGCAGCGCTAAGGAGGATCAGGATGAGAGGATGGAGGTGCTCAAGCCGGAATAGCTCCATGGGCTCGATTCGCTAATCATCCCCGGTAGTGAGCGCATAGCACCGCCATGGCCAAGTTCCCCAACTATCCCAACCTGGTAGCCTATTCTGCTGTGTCTTTTCATTGCGTAAAGCTATCTCGTATTTTGGTTATATAGTCTCTAAAATTGAAATGGAATGGGTGCTGGAACCTTTGGAGTCATGCACGATGTTCATTATAAAATGGATTAAAGTGATAATTTCTTTCTTGGTTAGTTTTTTGTCCAGTTCCATGAAAGGGATCAATTAAGCCACTAAATGGTTGGACAAACTAATTTTCGGAAAAGTGGTCAGTGTTTACATTCTGAACTTCTGACCAGACTGAAGAAACACCGTCTTATTCCAATAATAAGACAGTTCTTCTGCCTCCGACGTTGGCCGCCTTCCAGTTTGCAATATTTTGTTCTTCCTCATCCTATCAGGTTCTGTTCTGTATAGCTATATCATTCACTGCTATCACTGTTGATGACTTCTTCAGACTCTGAGTTAACGAAAAGTGCAGATCAATTCAGATTTTTATGTTTTCAGGAATCATTCTGGCTGCTCCTGCCCAAGATGCTAGGTGTACATCTACATTAAAGCAGTCAGAGCTGGCTTCCAACAAGGATTCATCATTTACAATTCATTTACACAAGGTTTATATCCTATGTCTGAAATGAAAATATGTTTTAAACCAGAAAGAATCATTATCTAAAAAAAACCAGAAAGAATGGTTATAATTCAAACAATCAATGTCTTTTGTTAGTGAAGTGTGACTAATGAATACAGCATCACTTGTTAGCATGATGTATTTGAGATGATTTTCTTGCATGATCCGTATAGCACAACTAGACACCATCAACTGGTCGTGATCTTGGTGTGTGGGTGGATAAGTGCCTGAACATGTTTGCTATAAGAGCATCGTCAATTTAATTCGACACATGTTGTATTCCAGTGAGAAGTGACTGAACGTATTTTCAGCACACATAAGCTAGGTGGTCCTAGGATGTGTTTTGCTAATTGGTCAGGTATGAGTTCAAATAGTAAGGTGGACTGGTTAATCACAAATGAAATTTTAAGGTGCATCTCAAGCGTTGGCGTGAACAAAAATTCAGAGAAGAGGAAAATTTTTAGTGAAATGGGTAATTTTGTTTCCCTGTATTGATATTTCATTACTCACTGTAAGAGACATGATGGCAAAAAGATAGTTTACTCCTAATGGTTCAAAAAAGGTTTTGGATGCATTGTATGGCACAAAGTGCTTATGGTTAATTAGAGAAAACACAGAAAACTCCTCCCCATCAGAATCGATGAGACGGATGAGTTTAGGCAGGCCACGCACATTGCAAAATGGTTGCATAAACTCGGTGGGCTGCAGATCAAGCCATTCCCAATTGCCTCAACAGAGCAGTTGAAAGGTTATTAATCAATTTTTCTGCACCTCACTGAAATCGTGTATCTTAGCATGTTATAGCTCATGGATTATATAATAAAAGAACTAAATTTCTGTTTTGTCGGTGATTATAATATAGTAATGTAATTGATAATATGAGTACTGTTACAATTTACAGATGGCCAGTTGGAGAAAAATAAACTCAAGGTTTATGACTGCAAAGCATATTGAAGGTGTACACATTAAGATTGTCTGGCAAAGAGGAAAGAAACAGATTAAGATTGTCTGGCAAAGAGGAAAGAAACAGATTAAAGAAAACATAGCATAATTGAAATTGAGATTTTTTTTAACAGGGTATTTGCGTTGTTGATCTGTACATGAAATGATATTTATGAATTAAATAAACTTTGAAAAAATTCTAACATAAGTTGGAGGTCCTGAAGTTTTGCGTATTCAATTTTGAGGAACTGTTAAGCCAGGCACCTAAATCTCTCTTTGTAGATCAGGCCTATAACGATTCCTGTATATTTCGTCTTTAGACTGTTTCTCATCTAGATGGGCACTTCTTGAACGGTAAAGTTTCTATTAACAAATTTTACTGGGAATATTATTGTTCAACGAAAAGAAATCTATAGTTTGTTAGTGCGTCATTGAATCAAGTCTTTTTTTAGTTTGCCGATTGAAAGTGGAAGCTATTAAGAGGATCAATGTTCTCTTGACTTTTGTACTCTGTTCAAACAATCATGAAGAGTTTCTTATTATCGCATCTTGGACAAGGTATATGACCAAGTGTGTGTGTGTGTGTTTATTGTTGTTACTTGGGGCAGGTTAACTAAAGGGTAACTTCCATTTAGTTCTGCAAATCTACTAATGCAGATGCTGCTTCCACAATACAACTGACTGCTGTATAATCACAGCTAACAAGTAACGTAAAAATGTGTATAGATTTCTTTTTTCTATTCCAGTCAATCATCTTTTTCTTGATCACTGAAGGTACAGTCATTAGCAGGAAATGATCAAGGAAGTTTTGATTAGGTAAATTTCAGTATGGTACATAGTCCTTTTCTTTAGTTCTCTGCATGTCACTCCACCCAGAGAATTTTCTAAATATACCATCCAATACGAACTGCTTTCATGATTTTTCACCTAATTCGCACTACTTTTAGAATACATCACTGGAGTACGAATTTTCTTTGTTCCGTGCCACTCTGTCCCCTAGCGTCGGTCGCGCCGTCGTCCTTCATCCTCCCGGCGCCGCCGTCATCCGTCCGCCACTGCTTGCGCCAGCCACGTCGTCACCCATCCGTCGTTGCCATCGGTGCACACGGTGGAGGGCCGGAGGAGAGGGGAGCAGCGGTGGAGGACAGAGGGTGTCGAGCTCCGGCAGCGGTGGAAGGCAAAGAGCATCCAGCTCCGTTGTGTGGGTTGCTGATCAGTCGGCGCCCATCGCCGACCATCCTTCCTCCCCGGCTTCCATGCTCGCCATTGCCAGCGACGGCAACCTGGTCTTGTCCGATGGCGCCACCGGCCACGCCCTTTGGAGTACTAACGTCACCGCCGGTGTGAACTCGTCGGCGTCGGGAGGAGGCGGCGGTGCTATGGCGGTGCTCGCAAACTCTAGCAACCTCGTGCTCCGGCTGCCGGATGGCACCGCCTTGTGGGAGACGTTCGAGCACCCCAGCAACACATTCCTGCTCGGCATGAAGATCGGCGTCATCTACCGGACGCGCGGTGGCGTGCGGCTTGTCTCATGGAAGGGCACCACCGACCTGTCGCTGGGGAAATTCTCCTTCGGCAGCGACCCGGACCAGCCGCTTCAGGTGGTCATCTGGAAAGGCTCGCGCGTGTCCTGGCGTACCAACCCATGGGAGGGCTACATGGTGAACAGCAACTACCAGAAGGGCGGGAAGTCGGTGTGGGGAGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030234