Os10g0551200

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0551200| Description = Similar to Scl1 protein (Fragment)| Version = NM_001071855.1 GI:115483305 GeneID:4349320| Length = 2553 bp| Definit...")
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Gene Name

Os10g0551200

Description

Similar to Scl1 protein (Fragment)

Version

NM_001071855.1 GI:115483305 GeneID:4349320

Length

2553 bp

Definition

Oryza sativa Japonica Group Os10g0551200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22090471..22093023

Sequence Coding Region

22090890..22092086

Expression

GEO Profiles:Os10g0551200

Genome Context

<gbrowseImage1> name=NC_008403:22090471..22093023 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22090471..22093023 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcgcctgcgccgaagctgcctccgttcccggcgggcgggttcgtccccgccctgaagccgaaggcggaggcggcgaacgacgaggccgccgctgcggtcgaacagctagccgaggcggcgaagctggccgaggccggcgacgccttcggcgcccgcgagatattggcgcggctcaattaccggctccccgccgcccccacggccgggacgccactgctccgctcagccttctacttcaaggaggctctgcgcctaacgctctcccccaccggcgacgccccagcgccatcggcgtcgacgccgtacgacgtggtcgtcaagctcggcgcctacaaggccttctcggaggtgtccccggtgctccagttcgcgcacctcacctgcgtccaggcggtgctcgacgagctcggcggcgccggatgcatccacgtgctggacttcgacatcggcatgggcgagcagtgggcgtcgctgatgcaggagctcgcgcagctccgcccggccgccgcgctcaaggtgaccgcattggtgtccccggcgtcgcaccacccgctcgagctgcagctcatccacgagaacctctccggcttcgccgccgagctcggcgtcttcttccacttcaccgtcttcaacatcgacaccctggaccccgccgagctcctcgccaacgccaccgcgggcgacgccgtggccgtgcacctccccgtcggccccgcccacgccgccgcgacgccggccgtgctccgcctcgtgaagcgcctcggcgccaaggtggtggtctccgtcgaccgcggctgcgaccgctccgacctccccttcgcggcgcacctcttccactccttccactccgccgtctacctcctcgagtccatcgacgccgtgggcacggacccggacaccgcgtccaagatcgagcggtacctcatccaccccgccatcgagcagtgcgtcgtggccagccaccgcgccgcctccgccatggacaaggcgccgccgccgccgtggcgcgcggcgttcgcggcggcggggttcgcgccggtgcaggcgacgacgttcgcggagtcgcaggcggagtcgctgctgagcaaggtgcacgtcagggggttccgcgtcgagaagcgcgccggctcgctctgcctctactggcagcgcggcgagctcgtgtccgtctcggcgtggaggtgctag</cdnaseq>

Protein Sequence

<aaseq>MAAAPAPKLPPFPAGGFVPALKPKAEAANDEAAAAVEQLAEAAK LAEAGDAFGAREILARLNYRLPAAPTAGTPLLRSAFYFKEALRLTLSPTGDAPAPSAS TPYDVVVKLGAYKAFSEVSPVLQFAHLTCVQAVLDELGGAGCIHVLDFDIGMGEQWAS LMQELAQLRPAAALKVTALVSPASHHPLELQLIHENLSGFAAELGVFFHFTVFNIDTL DPAELLANATAGDAVAVHLPVGPAHAAATPAVLRLVKRLGAKVVVSVDRGCDRSDLPF AAHLFHSFHSAVYLLESIDAVGTDPDTASKIERYLIHPAIEQCVVASHRAASAMDKAP PPPWRAAFAAAGFAPVQATTFAESQAESLLSKVHVRGFRVEKRAGSLCLYWQRGELVS VSAWRC</aaseq>

Gene Sequence

<dnaseqindica>938..2134#aagagagagagaaatcaaactccaccacccaccacgacatcgagctcgcaagcaagaacaagattgcaagaagaagaagttgttgttggtcgaggcgaggaggaggaggaggaagaaggagtttgtgtgttggtgttatgaggtgttggattagatgagaggaatgccctttggtgggagcgcgcgagaggggcacgcggggacactgctgcaacaccacctcatacacggcgttggcctcgcgcggccggcaagctcgtctcctcctcctccgccgccgccgccgccgccggagcaggtgggttctgggagccaaggtcggtgctcgaccaccgccacagcccgagccccagcccgcctacctcggcttccacgctgtcgtcgcctctcgccgacgtggcggccctcgccggcgccaacgccaagaacgtctccgtctccccgccgccgccgggatggggaacgggaggaggaggtggtgggggggaggaggtggtggcggcgaaggaggagtgggtgcaccagctcacgccgcttgatatggggctcggcgccggcgaagggtgggatgccgccgggaacgtgctgtccgacgcggcgcggccggacgtcgggggatggcgccggacaacacgttcctccgctggatcattggcggcggcgaggaccggtccccgatggcaggggtcatggaccgccggtgctcgagctcgaccatggcggcggcgcggcgcgctgcgcccgccgcgttcgggccgttcgcgccgccgcccgcggcaaggacacgaagcccgtggtgccgttcgcggcggggcaccccccgccgaacttcctcctccaacaccaccaccaccacccgcagccgcacgcggcgttcttcggcgcccaccacccgtcgttcgacgcggcgccgccgccttccaagcggcaccacccgatggccgccgcgcctgcgccgaagctgcctccgttcccggcgggcgggttcgtccccgccctgaagccgaaggcggaggcggcgaacgacgaggccgccgctgcggtcgaacagctagccgaggcggcgaagctggccgaggccggcgacgccttcggcgcccgcgagatattggcgcggctcaattaccggctccccgccgcccccacggccgggacgccactgctccgctcagccttctacttcaaggaggctctgcgcctaacgctctcccccaccggcgacgccccagcgccatcggcgtcgacgccgtacgacgtggtcgtcaagctcggcgcctacaaggccttctcggaggtgtccccggtgctccagttcgcgcacctcacctgcgtccaggcggtgctcgacgagctcggcggcgccggatgcatccacgtgctggacttcgacatcggcatgggcgagcagtgggcgtcgctgatgcaggagctcgcgcagctccgcccggccgccgcgctcaaggtgaccgcattggtgtccccggcgtcgcaccacccgctcgagctgcagctcatccacgagaacctctccggcttcgccgccgagctcggcgtcttcttccacttcaccgtcttcaacatcgacaccctggaccccgccgagctcctcgccaacgccaccgcgggcgacgccgtggccgtgcacctccccgtcggccccgcccacgccgccgcgacgccggccgtgctccgcctcgtgaagcgcctcggcgccaaggtggtggtctccgtcgaccgcggctgcgaccgctccgacctccccttcgcggcgcacctcttccactccttccactccgccgtctacctcctcgagtccatcgacgccgtgggcacggacccggacaccgcgtccaagatcgagcggtacctcatccaccccgccatcgagcagtgcgtcgtggccagccaccgcgccgcctccgccatggacaaggcgccgccgccgccgtggcgcgcggcgttcgcggcggcggggttcgcgccggtgcaggcgacgacgttcgcggagtcgcaggcggagtcgctgctgagcaaggtgcacgtcagggggttccgcgtcgagaagcgcgccggctcgctctgcctctactggcagcgcggcgagctcgtgtccgtctcggcgtggaggtgctagaaagccctcgccgccgtcgccgtctccggcgagcggcgcagccgtggagccgacgtatcaaggagccgcggattttagttagggactaatgatcctgctacttcttcctctccaagtgaaagtcaagtgtttttttaccctttttgtgtaacttttttttactccttttttcttcttcttctttgtgttgctgtaatgatctcagctgagctgatcagtgagctgagtgtcctaagattgtcgtgtcaccttgcagcttggctctgcttctgcttctgcttgtgcagatgcagagtgccatgtcgcaatggtgttgtactggtacagtagctggcgcattctacttcaccatcatccatccatccatccccctgtgttactactcgattccccgtgaaaatcaatggctatggcatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0551200, RefSeq:Os10g0551200