BGIOSGA030304

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Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030304| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030304, complete gene.| tag = OsI_304...")
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Gene Name

BGIOSGA030304

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030304, complete gene.

LocusTag

OsI_30427

Ensembl Transcript ID

BGIOSGA030304-TA

Ensembl Protein ID

BGIOSGA030304-PA

Length

7727

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1488241..1495967

Sequence Coding Region

1488241..1488544,1488828..1489076,1489377..1489495,1490335..1490457,1492249..1492414
,1492502..1492591,1493433..1493731,1494079..1494282,1495608..1495967

Genome Context

<gbrowseImage1> name=IndicaChromosome09:1488241..1495967 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:1488241..1495967 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCTTTTCCTCTTTTCCCTGCTCTCCTCCTCCTTCTGTGCTCTTCCTCCCTGGCTTTGGACTCCGTCTCCGAGCCAACCCTCTCATGGACCTGCGGAGACGACCAAGTTGCCATCTTGGACACATCCGATGGCGGCCGCAACCTGTCCGTCAATGGGGAATTGGTTCAGGATCGTGTTCTTGGCTGCCAGAAGCTCCGGTCGTACTACGTGAGCCGCTGCCTCCGCTGCGGCCAGCAGTCAGAGGCATGGAGGGGCGCCTGGAAGCACTACTGCCGTGAAGGGAGTGAATCAAGCAACGCACAAAATATACCAAGGAAGCTTTTAAGGCAGCCCTCAATGAATGATGCAAAAATTGAAGATGACCCATGTAAAAACATGGGAATTCATGGACATAATCAGGATGATAATGATTCTTTGGAAGGGCAGGATCATCTACTAGCTGTGCCAGGTGTGATTCTCCTATGCTGTGGTCTGATGATACCGTGCTTTCATGCTGAGAAAAAGGAAGTCAGCAGGCATAACACTACATCCATTCAGCGCAATGCAGGGAACTGGTTGTCTAAAGCTTTCTCTCATCATGAGTTAAATACATGCTCAAATGCTCCCTGTTCTAGTATGTTGAGTATGTCAGTTAAATCTTGCGCTATCCTAACCATCTTCTGCATGCAGATTCTGAGGGCTACTCAGAATTTCTCACCTTCATTTAAGTTAGGTGAAGGAGGATTTGGGACAGTCTACAGAGCTGTATTGCCAGATGGCCAGGTGGTTGCAGTAAAGAGAGCCAAAAAGGATCAATTCGCAGGTCCCAGAGATGAGTTTAGCAATGAAGTAGAATGGCTTGCTAAGATTGACCACCGGAATTTGGTGAGGTTGCTGGGATTTACTGATAAGGGACATGAACGTATCATTATCACTGAGTATGTTCCAAATGGCACTCTGAGGGAGCATCTTGATGGCCAATATGGAAGAACCCTGGATTTTAATCAGCGTCTCGAAATCGCAATTGATGTTGCACATGCACTGACTTATCTTCATCTATATGCTGAGAAGACAATAATTCATCGGGATGTGAAGTCATCAAACATCCTGCTGACAGAGAGCTACCGGGCCAAGGTGTCTGACTTTGGATTTGCAAGAAGTGGCCCCAGTGACACAGAAAAGACACACATCTCAACAAAAGTAAAAGGAACCGCTGGCTACCTTGATCCTGAGTATCTGAGAACATACCAGTTGACTCCTAAGAGCGACGTCTTCTCCTTTGGCATACTGCTTGTGGAAATTCTCTCTGCTCGCCGACCGGTAGAACTGAAGCGGGCTGCTGAAGAGAGAATAACTATCAGATGGACATTCAAGAAATTCAATGAAGGGAACAGGAGGGAGATATTGGATCCGTTGTTGGAGGATCCTGTGGACGATGAGGTGCTCGAAAGGCTGCTGAACTTGGCATTCCAGTGTGCCGCTCCGACGCGGGAGGACCGTCCGACCATGAAAGAAGTTGGAGAGCAGCTGTGGGAGATCAGGAAGGAGTATGGAAAGAGTGTCAGGAGGTGGGGTGACCTCCTCAACCTCGAGCGTCGGGCGCTGGAGCAACTCCCTCACGGGCTCCAGCGATTCAGTGAAGCGATGTGTAGCAGTGAGGTTGGTGAAGCGGTCGGCCTGGGCGAAGCGGTTGAGGCCAGTGACCGCAAGCGCCCCGACGAAAACGAGGAGGTGGAACAGGAGCACCACCAGCCAGAACACATCACGGTAGCACCGTCGACCCTACCCCGCACCCTAGCCACCGCAACTCCGCAAGTGGCACTGGGGAAAGAGAGTAGGGTTCGCGCTCTCCCCCTCCAACAACGAGATGGCCCACCACTTGCCCGCCTGAGTCCCGACTACATGCAACTAGTCGTCTCTGTATGTTGA</cdnaseq>

Protein Sequence

<aaseq>MASFPLFPALLLLLCSSSLALDSVSEPTLSWTCGDDQVAILDTSDGGRNLSVNGELVQDRVLGCQKLRSYYVSRCLRCGQQSEAWRGAWKHYCREGSESSNAQNIPRKLLRQPSMNDAKIEDDPCKNMGIHGHNQDDNDSLEGQDHLLAVPGVILLCCGLMIPCFHAEKKEVSRHNTTSIQRNAGNWLSKAFSHHELNTCSNAPCSSMLSMSVKSCAILTIFCMQILRATQNFSPSFKLGEGGFGTVYRAVLPDGQVVAVKRAKKDQFAGPRDEFSNEVEWLAKIDHRNLVRLLGFTDKGHERIIITEYVPNGTLREHLDGQYGRTLDFNQRLEIAIDVAHALTYLHLYAEKTIIHRDVKSSNILLTESYRAKVSDFGFARSGPSDTEKTHISTKVKGTAGYLDPEYLRTYQLTPKSDVFSFGILLVEILSARRPVELKRAAEERITIRWTFKKFNEGNRREILDPLLEDPVDDEVLERLLNLAFQCAAPTREDRPTMKEVGEQLWEIRKEYGKSVRRWGDLLNLERRALEQLPHGLQRFSEAMCSSEVGEAVGLGEAVEASDRKRPDENEEVEQEHHQPEHITVAPSTLPRTLATATPQVALGKESRVRALPLQQRDGPPLARLSPDYMQLVVSVC</aaseq>

Gene Sequence

<dnaseqindica>1..304#588..836#1137..1255#2095..2217#4009..4174#4262..4351#5193..5491#5839..6042#7368..7727#ATGGCATCTTTTCCTCTTTTCCCTGCTCTCCTCCTCCTTCTGTGCTCTTCCTCCCTGGCTTTGGACTCCGTCTCCGAGCCAACCCTCTCATGGACCTGCGGAGACGACCAAGTTGCCATCTTGGACACATCCGATGGCGGCCGCAACCTGTCCGTCAATGGGGAATTGGTTCAGGATCGTGTTCTTGGCTGCCAGAAGCTCCGGTCGTACTACGTGAGCCGCTGCCTCCGCTGCGGCCAGCAGTCAGAGGCATGGAGGGGCGCCTGGAAGCACTACTGCCGTGAAGGGAGTGAATCAAGCAACGGTGAGTTTCATCCTGTTGATTAGCTTTTGGTAACGAGCTTCAATGGTGCTAAGAATAATGCCCGGGTTTTGAATTTGTGTACTTTCTTGGTATCATGTTGTATTGTATAGAATTAAAGTTGAGAGAGCCAATATAGATCTGCTCATGGTAAATTATTGATATGATGTTGTGAGAGAGCACCTTTATTTGTGTACTTTCTTGGTATGATGTTGTACACACAAAGATTTTCTTTCCTTCTAAATTGTGTGTACTCATGGTTTCATGGGAATTATTGTAACTGCAGCACAAAATATACCAAGGAAGCTTTTAAGGCAGCCCTCAATGAATGATGCAAAAATTGAAGATGACCCATGTAAAAACATGGGAATTCATGGACATAATCAGGATGATAATGATTCTTTGGAAGGGCAGGATCATCTACTAGCTGTGCCAGGTGTGATTCTCCTATGCTGTGGTCTGATGATACCGTGCTTTCATGCTGAGAAAAAGGAAGTCAGCAGGCATAACACTACATCCATTCAGCGCAATGCAGGTGAGTCCACACATCATGAGTACCTTGCACTATATTACTGCTGAAAAAAATACCATTTGGTTGTCACCCACTCATGCTGATGGTGGACTAGAAATTAAATACACACAATTATTGATTTTTCATATCATGACAGTTGAAGTAAAAAGTGTGTTGAAGACTTACTGATGTCGTAAATGACAAGTAATCAGAGGGAGTATATAGTATTTCTGTTCTTCAAACTGTTTCACGGCAAGAGTCAGATGAATAGCTATTTTGTAAGGATTAAAATCCACATGTATTCTGTGCAATTTGTTGTCATAGGGAACTGGTTGTCTAAAGCTTTCTCTCATCATGAGTTAAATACATGCTCAAATGCTCCCTGTTCTAGTATGTTGAGTATGTCAGTTAAATCTTGCGCTATCCTAACCATCTTCTGCATGGTATAGTTTGTGATGGCACATTGGGACCTTTAGAGCTAACTCTGATGGATTACTAGTATGTGTTTACAAATTTCTTACCTACCATTTACTTACCAAACTAGCAACTCCCAGCTAGTATGTGGATTTACAGAGAACCATAGTGGATCATCTCTACCAATTCCTAACTTGGTCTGTGCTACTTAGGAAGGAGTGGCATCTAGTGCAGAAAAAGAACTTATATAATAGTCCGTAACTAATAGAACAAAATCTGTTTGTTTGATTAACTGTCATCCTGTAATTTTTAACTCATGTGCTGCTATTCCTTCCAGCCTCATTTGTGTCGTTAGCTCTATACACACAGCAGAATGAAATAATTGCTACCTAAGTTTTAGGTGTGCCCATCTTTCTGACACCCCTACTAGTTAGCAATTAATAGGGTTATTGAGAACTCAATGTTTCCTAGAAGAACCAAGAAAAAGTATTTGTAATAAAACTTCTTTGCAAAGCCATTTATATTTTGCACATTATGTATTTTAATATATGTTGCAGAATATCTCAATTCTGGTATGCAGCTCTGACTGTTAAGCTGTTTGCAAGATTAATGTTCTCCTACTGTACTAGCACCATTTTGATTCAGTGTCAAACTCAAAAGCATTGTTGGGATCTTGTCCTTAACAACCAAACTTCTTTTATCCAGTCGAATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGAGAAGGTTCCACCAACTCCACACCGAATACCCCCGAGTCCATCTAGATTCGCACCATCTCCACAAATGCTCGAGTTGGATCTGTGAACTTAACTGTGCAGCAGATTCTGAGGGCTACTCAGAATTTCTCACCTTCATTTAAGTTAGGTGAAGGAGGATTTGGGACAGTCTACAGAGCTGTATTGCCAGATGGCCAGGTGGTTGCAGTAAAGAGAGCCAAAAAGGTAATTCCATCAGCTCACTCAATCTGTGATTTTACCTTCTTTTTTTTTTTTTACCTCTAATCAATTTGTTGATTCATCATCAATCATGTTGATTGTAATGTATTATCCCAGTTTGATTTAGATTATGAATGGATTATTGCGCAGATTATCTACTCGATTATAGTGATAAATTAAATATTTTAAGAAATAAATTTAACAAATGGTTTGAAATAAGTGGTCTAGGCAATGCGGTAGAAGAATTTTAAAGAAACTGTGTTTTCCGAAGCGTGGAGCAAATGATCTGGTGAATAAGCTGAAAAGAACAGGGCCAATGCGTAAAGTACACTAGCGGCCCTCTTACAGTGTCAGTCATGCCACTAAACTTTTAAATTGCAGATTTAGGTTCTTAAACTTGTTTATCATAACTCTCTAGAGAGCGATGTGATATGCCAACTTAGAGCCGACATGGTGTGTGGGAACACATAAGCTATGTGTGAGCTTGGTATAGATGGGATATATGCATATATTCCCTTCTACACTGCTCATGTCATCTTGTATGTCACGTCAGCTCCAAGTTAGCATGCCACATAGGCTCTTGAAGAGGGTATGGGCACATTTGGACTCATGATGGTACGTTAAACAACTATAAAGGCCTAAATCTGCAATTTGAAAGTGTAGGGACCTGGATGACACTATTCGGCAAGTTTAAGGACCACTGGTACACGTTGCTCCTTTTATATCACTATGTTGGGGTTAATTAGAATATCTATGGGTGAATACACTGCTCTTAGGATTTGGATTAAGTTACTCCCTCAGGTAAAAAATGATGTTTGATTTTTTTTTCGTGGTCCTCAAGGTGCCTTGCCCATAATTTTATATGAGAATAAATTTATATAATATTGTAAGTGTTTACACCCAAATTTGGCACCTAGGTTCAAATTAAGGAATTATTGCCAAGATTTGGAAAAATTGCCGGTTTCCTCCACAGGGCCGGTCAGACTGCCGTATGTTGGCCGGTCAGACCGTTGCTTGAGGGCCGGTCTGACCGGCGGTGCGTGCCGCCGGTCAGACCGGCTGAGTCCGAGCCCGAGTCTGTTTTTCGTCGGGTCTCGGGTTTCCTTGCTCGGGAAGGCATGTTTCGGGTTTCCATTGGTTTCTACCCCGAGTTGGACGTGGAGGACTTGTAGGAGGCAAGACCAACCCCTATCTAAGGGACAAGGCCGGTTTGATCGAGATATTTCTCTTCCTCAAACACAATCGAATCGTTCTTTTATCTTTACTTTAGCCATGTTTTCTACTTTACTCTAGTTTTAGTTCATCTTTGTCGATTTGCGCCGTAAATCGTCTGCCGTCGCTCGAGAGTGCAATTACCCCTTTGTAGGTTTGTCCCGTAAACCTTCCGTTTGCCCACGAGACAGGCAGTTATCCTCATATCGATCTAAATCAGCTTAGAGGCTGATTTTGATCTCTAAATCGGCTCCGCTGGCCGGTTTAGCTTTTCTTTCTACAAAACCCATCTTGATTTGTCTTTTGGCTAGATTGGGGTGGTTGGCGATTCCATATCACCGCAAGGCGTTTAGGTGTCCCGATCGTGATTGTCTTCTTGTCAAAAAAAAGTTGCCAACAATAAGTTTATGATGTTATGAAATTACATTTCAGGATAAATCTATGTACCATTTTTATGTTTTCAAACTTAGTACTTTATTAGAAGTCGCTGATAGTCAGATCCTATCCAAAACATCAAGTATTTATGACCAGACGAAGTATTTGGTTTACTGCCTGCTAATGGGTTTGACTATTTTTTGTGCACAGGATCAATTCGCAGGTCCCAGAGATGAGTTTAGCAATGAAGTAGAATGGCTTGCTAAGATTGACCACCGGAATTTGGTGAGGTTGCTGGGATTTACTGATAAGGGACATGAACGTATCATTATCACTGAGTATGTTCCAAATGGCACTCTGAGGGAGCATCTTGATGGTACATTGCACTTTCTGATTTATTCTCTTCATTGCCATTTGTGTGTTTCCAAATTTCCATATTAATAAATATTTCTGCATTCTGCAGGCCAATATGGAAGAACCCTGGATTTTAATCAGCGTCTCGAAATCGCAATTGATGTTGCACATGCACTGACTTATCTTCATCTATATGCTGGTAAGCCATCTCTGTTTTTCCTTGGATCAATATTGATGTGATGCGCTCATCTATACCTTCTATAGAGATGTGCCTGCCAGCACAACTCTAATGCCCATCGGACTACTAAATCACCAGCACCATTAAGTTCCTTGTGTAGTGAGCATTCCTTTTTGGCCATCTCGAGTTCTCTCCACAGTGCGGGTCGATCATCATGCCCTGTGTAGCAAAGAAGATGACCTATTCTCTCTCCCTTTATTTATTTCTATCATATGCAATCTGAATATGCAAGGAAATTTATTTTTATGAATTTTGCGAAGTCCATACACATTTTCTACCACATCAGATGCCAAAGTGGCAAACCACCTTGAAGACCCCTCTAAAGGAGTTATTTAAATGTTTTTGCATAGATCAGAAGTTTCCTGGGATGGTTTATAGTTTAGAGGATCTATTAGACTTTTTCCTTGTTAATTTGGTTGCATAATTTCTATTTTGAAATAACACTAGTGCCAATTTTCTATATTTGTATTTGAGTAAATTTCAGAAAGCTACAACTATTTTGTCAAAACTGTCAGTATGGTTTAGCTAAGCATTTCAGAGAACTGCAACAATAGCATACGATTTTATCAAAAAGCTGTAACTTTATATCTCTACAATTTTGGCCCCACCTATCATACACATGACGTACACATGCTTTATGCAAATCGGGCCCACATGCCATACACACATAAAGGAGAAAATTTCATATTGATGAAATCATTTGCTATTGCTGCGGTTTTATGAAATTCACACTTTTTATTTTGATGAAGTTTGATTTTAATAATACTGTATTGCTATCTGATAATTTCTCCGATGTGAACAGAGAAGACAATAATTCATCGGGATGTGAAGTCATCAAACATCCTGCTGACAGAGAGCTACCGGGCCAAGGTGTCTGACTTTGGATTTGCAAGAAGTGGCCCCAGTGACACAGAAAAGACACACATCTCAACAAAAGTAAAAGGAACCGCTGGCTACCTTGATCCTGAGTATCTGAGAACATACCAGTTGACTCCTAAGAGCGACGTCTTCTCCTTTGGCATACTGCTTGTGGAAATTCTCTCTGCTCGCCGACCGGTAGAACTGAAGCGGGCTGCTGAAGAGAGAATAACTATCAGATGGGTATGTTCAATGGCTTCTTCTTTGATACCAATTCTTTGCAATTAATTCCAGTGATGTTACACTTGTTGCATACTTCTATTACTATGGATGTGATCATATGTTACCATGAACTAAAATGACACTGATTGTTAATACAGCTCTGGCAAAATGTGAGGGTAAAATCATACTCGTTTTTCTGATCTAACCATAACTGTCCTCAGTTTTTTGCACGATAATTTGAAATATAGCGGAACTGAACCTCTAGCTAGAATTTACCTACAACCGTGTTTCAAGTCAAAACTCTACTTTTGTATCTGTCCTGTCCATAAGTAGAGAATGTGGGCACACTTTAACTTGTATTTCTGCAGACATTCAAGAAATTCAATGAAGGGAACAGGAGGGAGATATTGGATCCGTTGTTGGAGGATCCTGTGGACGATGAGGTGCTCGAAAGGCTGCTGAACTTGGCATTCCAGTGTGCCGCTCCGACGCGGGAGGACCGTCCGACCATGAAAGAAGTTGGAGAGCAGCTGTGGGAGATCAGGAAGGAGTATGGAAAGAGTGTCAGGAGGGTGTGAACATTAAAGTTAGCTCTTTAGGCTTTTGATCTTCAGACATGCATATTCTTTGTGCCATTGTATACGCATGTGGTGATATGATGTTTCTGCTGAGCTGCTTCCAAATGTGCTACTTATTGAACAATGTACAGAGAGGGGTAACACCAGCCGCACTTTGTATGTATCTTTCTACTTTTGGAATTACATGACTGGTGTTGCGGGTTTATTTCTCCATGGAGCTACTGTTCTTTTAGTGAGACTAGCAATACTGCATGTACAATTCACGTTTTATTCTATATATGCTGTTTCATAACCGCGTCTAAACTATTGGGCCAAATTAAACTAGGGACTAGCCATATTTTTTTGTCATATTGTTCTAAAAACCAGTCAAATTTTTTATACTGTAAACTACATCTACACCAATATGACACTATAAATTTCAATAGTTACATTGTAATTTTTCTAGTACCCATTGTACAAGAGAATTAGAGTAGAAGAAATTGATTATCTTCTTGAGAGGAGATAACGGAGATAGAAACATACATATACATATATACTACACAGGGAATAAAGCGAGATCAAGTGAAAAAAGGGGGGCTATATCTTAGCAAAACTAAGTCAACTGAAAATTAGAAGACAAACAACATCAATGAATGAACTTTACTGATCTATGAAATTAAATTTTTACAACAATATGTGAACTATAGTCACTCAGATAACATTCAAGAAAACTTATATGGTAACCAAATGAAGCATAATAAAATATATAATCTTGGGATTATACCTTACCTTTTTGACCTTTGGGGAAGAGAAAAAAAAAAAGCTTTTTATGCTGATGGGCCGGGCTGGGCCGCTAAGTGAGCCCCTGTTTAGTATCCAGGTTTGGAATAAGTTCACATTAGGTTCCTCAGTTTGTTGCCGAGTCTGAAATTCGTCCCTAAACTAAACCCATCGCCCAACTCACACTACCATGCCAACTTAATTTGTCCTTTGGCAATATAGTAGTTGGTTTTGGTTGACGTGGTGAGTGGGACCCACATGCCAACGGCTAACTTTTTTCCTTCCTCTGCCCCTCCCTCTTACCTCTCTTCCCGACTATACCTATGAAGCACTTAAATTACATAGAGGAAGTGCAACCTATACTGATGGCAAACCCAGAAGCAGAGCACGCTCACCACTGTGAGGTACGTGGTGAGGTTGTGCGTGGCGGCCCTCATGACCACCCTCTCCGCATCTTTCCTCCTAGGCTCCCAATAGTCGCCACCAACCATGCCCATGCGATAATAGACCCCACAGCCCCGTGGTGCCATAGTAGGGCTACTACGACTCCGTGAGCTCAGTGGGGTGACCTCCTCAACCTCGAGCGTCGGGCGCTGGAGCAACTCCCTCACGGGCTCCAGCGATTCAGTGAAGCGATGTGTAGCAGTGAGGTTGGTGAAGCGGTCGGCCTGGGCGAAGCGGTTGAGGCCAGTGACCGCAAGCGCCCCGACGAAAACGAGGAGGTGGAACAGGAGCACCACCAGCCAGAACACATCACGGTAGCACCGTCGACCCTACCCCGCACCCTAGCCACCGCAACTCCGCAAGTGGCACTGGGGAAAGAGAGTAGGGTTCGCGCTCTCCCCCTCCAACAACGAGATGGCCCACCACTTGCCCGCCTGAGTCCCGACTACATGCAACTAGTCGTCTCTGTATGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030304