BGIOSGA030323

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Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030323| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030323, complete gene.| tag = P0406E0...")
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Gene Name

BGIOSGA030323

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030323, complete gene.

LocusTag

P0406E03.33

Ensembl Transcript ID

BGIOSGA030323-TA

Ensembl Protein ID

BGIOSGA030323-PA

Length

3411

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2279986..2283396

Sequence Coding Region

2279986..2280181,2280857..2281004,2281193..2281384,2281806..2281934,2282296..2282465
,2282874..2283004,2283319..2283396

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2279986..2283396 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2279986..2283396 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGGCTACGAGAACGGCGACTCGCCGGTGGCCGCCGCCGGAGACGGCGGCGTCATCCTGGGCGTCGACGGCGGCACCACTAACACCGTCTGCGTCTGCCTGCCGGTCGCAATGCCGCCGCCGGAATCGCCCGGCGCCGTCCCCGTCTTGTCCCGCGCCGTCGCCGGCTGCTCCAACCGCAACTCCGTCGGAGAAAGTGCTGCACTGGAAACTCTAGAACAGGTCATGGCACAGGCCCTCACATTGGTCAACACGGATCGTTCAGCTGTCCGTGCAGTTTGTTTAGCTGTATCTGGAGTTAACCATCCTTCTGATCAGCAGAGGATGCTAGACTGGATTCGAGATCTCTTCCCTGGCCATGTCAAGTTTTATGTGGAAAATGATGCGGTGGCAGCTCTGGCCAGTGGTACAATGGGAAAGCTACATGGCTGTGTATTGATAGCGGGCACTGGAAGCATAGCTTATGGGGTCACTGAAGATGGAAAGGTAGCAAGAGCAGCTGGTGCTGGACCTGTTTTGGGCGACTGGGGTAGTGGATATGGCATTGCTGCACAGGCCCTGACAGCAGTCGTAAAAGCATACGATGGCCGTGGACCTCATACTAATCTTACAAGAGAGATCCTTAGGAAGCTTGAGCTTTCTTCACCAGATGAATTGATTGGGTGGACGTATGCAGATCCATCTTGGGCCCGTATTGCAGCACTTGTTCCTGTTGTGGTATCTTCTGCTGAAGATGGTGATGAAGTAGCAAACAAAATATTGCATGATTCAGTGCAGGAGTTAGCTGATAGTGTTGTTGCTGTTGTTCGGCGCCTTAAATTGTGTGGTGAAGATGGAATGGACCAATTTCCGCTTGTTTTGGTTGGAGGTGTTCTCGAAGGCAACAAAAAATGGAACATTAGTGGTGAGGTTGTAAGATGTATTTCCAAAGTCTTCCCAGGCGTCCATCCTATTCGACCTGAGGTGGAACCAGCCATTGGTGCAGCATTACTAGCTTGGAACCATCATCGCAAAGGACTGAAACTGGAAAACGGAAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MGGYENGDSPVAAAGDGGVILGVDGGTTNTVCVCLPVAMPPPESPGAVPVLSRAVAGCSNRNSVGESAALETLEQVMAQALTLVNTDRSAVRAVCLAVSGVNHPSDQQRMLDWIRDLFPGHVKFYVENDAVAALASGTMGKLHGCVLIAGTGSIAYGVTEDGKVARAAGAGPVLGDWGSGYGIAAQALTAVVKAYDGRGPHTNLTREILRKLELSSPDELIGWTYADPSWARIAALVPVVVSSAEDGDEVANKILHDSVQELADSVVAVVRRLKLCGEDGMDQFPLVLVGGVLEGNKKWNISGEVVRCISKVFPGVHPIRPEVEPAIGAALLAWNHHRKGLKLENGS</aaseq>

Gene Sequence

<dnaseqindica>1..196#872..1019#1208..1399#1821..1949#2311..2480#2889..3019#3334..3411#ATGGGCGGCTACGAGAACGGCGACTCGCCGGTGGCCGCCGCCGGAGACGGCGGCGTCATCCTGGGCGTCGACGGCGGCACCACTAACACCGTCTGCGTCTGCCTGCCGGTCGCAATGCCGCCGCCGGAATCGCCCGGCGCCGTCCCCGTCTTGTCCCGCGCCGTCGCCGGCTGCTCCAACCGCAACTCCGTCGGAGGTAACCACCGTACAAGGCTTGGCCCAGTTCCGTGGCGGCCCCTGCTGCATATGTAATAGTTGGATCTTGGGGTTTGACCATCGGTATCGGGTTAGATTTTGGCGATTTGCGGTGCTGTGAACGCCACTGCTGCCGTGCAATTCTGGTGAATTTTGCGACAATATAGTGTTCCCATGTCTTAATTCTGGTGAATTTTGCGACAATATAGGGTTTCAGAGAAGATTAATTATTTGCATAATTATGATCTCCAAAATTTTTCTAATGTGAAATTTATTGATGATTTTGAAAAGAAAAAAGTTCATCTGTTTCTTATAAATTCAGTGGTTTCCTACCTAGAATCATCTGATCCAGATACATAATAGGAGTAGAAAATGGCATTGCTGTTGCTAAGCTGTGGTATCTATGTAGTAGCCTGGTAAATTTTAACTGATGGGGAATACATCCTTTTATATGTGGATGTTGATTAGTATAGAACTAAAAATCATACCATTACTTGAAACATCATTATGATACCACCGTTATTGCAGCTTACTAACCTTTCTAATTGAATGGTTTCCCCGTATTAATTCATATTTTCACTAGTCTAGGTGCTATAAATTATTATAGATAGAGTTGGGTATTGCACGAGTTTTTGCTCAAGTAATACTGATCACTTTGTCCTTTATCTTATTTCAGAAAGTGCTGCACTGGAAACTCTAGAACAGGTCATGGCACAGGCCCTCACATTGGTCAACACGGATCGTTCAGCTGTCCGTGCAGTTTGTTTAGCTGTATCTGGAGTTAACCATCCTTCTGATCAGCAGAGGATGCTAGACTGGATTCGGTATTGATCTCTGCATATATCCCCTTCCTGAAAATTCATCCGCTGGCCACTTCAAATAGCATCAATAAATTTTGTAAATCATGGTTTCTTATTGAATTGGACACAGTCTGAAGCTATCAGGGAAACAATGCATGAGTTAAAATTTTTCACTTGCTGCTAAGTGCTAAGTGAGCTTTTTTGTTCTCCAGAGATCTCTTCCCTGGCCATGTCAAGTTTTATGTGGAAAATGATGCGGTGGCAGCTCTGGCCAGTGGTACAATGGGAAAGCTACATGGCTGTGTATTGATAGCGGGCACTGGAAGCATAGCTTATGGGGTCACTGAAGATGGAAAGGTAGCAAGAGCAGCTGGTGCTGGACCTGTTTTGGGCGACTGGGGTAGGTGAGTTACATTTATAAGAGAAGGGAATGTTAAGAAATTCCAAAGATAAATGTGTTATTTGAAGTTGGTATACTGTTTCTTTTGGGGGATTTCATTTGCATATTCTCCTAGCAAAAGCTTCTGATCTATAACATGAAAATCAGACAATATGTTATTTATTTGCAAGGGGTTATGAATTTCCACTTAGTGTGAAAACCCACTATCATGAATTGACCATGACATGCTTAATTAAGGGTGAATAGGCATTTAAAACTGTTAGCATTTTCAATAGAGTGACAGGAAAACATAGGTTACATTATTTGACCATGAATACATCCACATCCTTAGGAGAACCCCAATTTTTTTCCAGAGCAATATATTTTCAATAGCTTTTACATGTGACAAAGGAAATGTAGGTGACACCATGTGTACATTAATGCAGTGGATATGGCATTGCTGCACAGGCCCTGACAGCAGTCGTAAAAGCATACGATGGCCGTGGACCTCATACTAATCTTACAAGAGAGATCCTTAGGAAGCTTGAGCTTTCTTCACCAGATGAATTGATTGGGTAAGTTCTCTCGTACATATATATCCTTTTTGCCAACACATTCTATTTCGGTTGTATTTTTCCATTAAGTTTTTACCATGAGAAATTATCACTATTGTCAAGCATCCCTTTTGAGATCTTTTTTCCATTATGAAACTTGTCCTGTTGATGCATTAAGCTCATCACATCCAACGATCCATATTTTAACATCCTATGAAGGCGATACTACGATATTTGGACCAAACTGGTCTGAACAAACTGCTATTTCAGTGTTGAATGCCAAAAAGACATCCTGCGATTGTTTCATGTTTTATCTTGAAAATCTACGATATTTGGAGTCTTTAAGTTAGTTATCAACTTATCATCCTTGTCTGTGGCATAGGTGGACGTATGCAGATCCATCTTGGGCCCGTATTGCAGCACTTGTTCCTGTTGTGGTATCTTCTGCTGAAGATGGTGATGAAGTAGCAAACAAAATATTGCATGATTCAGTGCAGGAGTTAGCTGATAGTGTTGTTGCTGTTGTTCGGCGCCTTAAATTGTGTGGTGAAGGTAGTAATTCAGCACAGTTTGTGTATTATTCTCCTAACGAATTTCTTGATGTTTATTCATGAAATGATTGGAGAGCTTGCATCATATAATACCAAAGCAAGTAGCAATTTTTTATGTTACTGCAACCAGGTACTTCCAGTTTTAGTCCAAGATATTCTTCTTCGAAACTGTAGGTTCATTGTCTACTAGTGCATGGCACAAGTTGTTGCACTCTGCCACTCTGAATGCAGGTTTTGGGTCAAGCCCAACCTATTTCCATGATGCACTTGATTTGACACAAAAGCACGCGTTTTTAGAGATTATGTAAGGCGAGGTTGTCAGATATTTATATTGTTAAGTTGTAACTCTTTGAGGAATTGAGTAAAACATTATCGTGTATAACTGAGGGCTTCCTTTTACTCTGTGCAGATGGAATGGACCAATTTCCGCTTGTTTTGGTTGGAGGTGTTCTCGAAGGCAACAAAAAATGGAACATTAGTGGTGAGGTTGTAAGATGTATTTCCAAAGTCTTCCCAGGCGTCCATCCTATTCGACCTGAGGTTAGTGTTGTACTACTTTATCCTGTTGTGAGTTTCATTTTCTAGCAGTGTGATTTACTAGAGATTCAAAAGGTCAAGCGTTTACAATTTCGGGGGTATTTTACCTTTTCTGGAGAATACAATTTTTGGGGATGCTTCAGAAGTATTTTTCATTCAGTGATTGTATATGGACATTAGTTTATGTAGGTAATGTTGCTGGATTTAGTTTTGCATAATTTCTGTCTCCAGCATTCAAGTGAACAGTCCACTTAAATAGTGCGAACAACTTTCAGGTTTGACAGTGATAAAAAAGTTATTTTTATCACATTTTGCAGGTGGAACCAGCCATTGGTGCAGCATTACTAGCTTGGAACCATCATCGCAAAGGACTGAAACTGGAAAACGGAAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030323