BGIOSGA030328

From RiceWiki
Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030328| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030328, complete gene.| tag = P0006E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030328

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030328, complete gene.

LocusTag

P0006E02.16

Ensembl Transcript ID

BGIOSGA030328-TA

Ensembl Protein ID

BGIOSGA030328-PA

Length

2364

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2469834..2472197

Sequence Coding Region

2469834..2472197

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2469834..2472197 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2469834..2472197 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAATCCGGCGCAAAAAAGAAGAAACCCGCCGCCGCCGCCTCCGCCTCCGCGGCCGCCACCAAATCATCTCCCGCCGCAACAGAGCCGAAGGCACCGACGCAGTCCCAGCCCCCCGCGGCCAACGGGGCGGCGCCGCATCTGGTGGACCCCGGCGTGCTCCTGCGCCGCGCGCACGAGCTCAAGGAGGAAGGCAACCGCCTGTTCCAGTCCCGCGACTACGGCGGCGCGCTGCGGCAGTACGAGCTCGCTCTCCGCCTCGCCCCGCGCGGCCACCCCGACCGCGCCGTCTTCCACAGCAACCGCGCCGCCTGCCTCCTCCAGCTCCGCCCCGTCGACCACAAGGCCGTCGCCGAGGAGTGCTCCCTCGCTCTCCAGGCGGAGCCGCTCTTCCCGCGCGCGCTCCTTCGCCGCGCCCGCGCGCTCGAGGCGCTCGGTCGCCACGAGCTCGCGCTTACCGACGCCCTTGCCCTCCTCGCTCTCGACCCCGACCACCAGGACGCCGTCGACCTCGTCCACCGCCTCCGCTCCCGCATTCTATCCCCGTCCTCCTCAGCCTCAGGCTCTGCCACCTCCACGCCCGAACCAACTAGCCGCCCCTCCCCTGCTGCTCTTGGTGCCTCCGCTGTTGTTGCCGGCCTAGGCCCGTCCCTCCCCGCTCGCCCTTTCCCCAAGAAACCATCACCTCCTCCTCCGCCTGCTCAACAACAGCAATCGGTTCCTCCAATGTCAAAATTTAATCCGTCGCCACCATCGCCCAAGTTGGTGCCTTTCTCCAACTCTCCGCCATCTTCTGCCAACGCATCAGCTGCTGAGAGCTCCCAGAAGGTCACGCCGACACCTCTGGTTCCCTCTTCACTTTCGTTGAAAGACAAAGCGCTGATGGACAAGAAGGTTGTCACAAGATCAAGGCCGCTCAAGCTGGTGTACGATCATGATATAAGGCTTGCGCAGATGCCAGAAAAATGCAGCTTCCGAACACTCCGTGAAGTTGTGGCATCACGATTCCCATCGTCCAAGGCTGTGCTGATTAAGTATAAGGATGCTGATGGTGATCTGGTTACCATTACTTGTTCCGCAGAACTTCGATTGGCCGAGTCCTGTGTTGATATAGCTGGCAGTGAGGTGATAGAAGATGGTGCACGGCATGGTCAGAAACTTCCAATGTTGAGACTTCACATTGTTGAAGTAAGCCCAGATCAGGAGCCTCCAATCCCAACAGAAGAGGAGAAGCTGGAGCAGGATAATGAGTTGCTGGTGAAAGGTGAAGATAACCCTCCACATGCTTCAGCAGCTGTGGTGACTGATGCAGAGGTGACGAAACAAGATGTGGAGAATGTAGTTGCTGAAGCTGAACAGAACACCCTGACAGGGAAGAAAGATTGTGGCCATGCTGAGTGCAAGGAAGCTGAAATTGATGATTGGCTTCTTCAGTTCGCAGATTTATTCCGGAACCAGGTTGGTGTTGATGCAGATGCACATCTGGACCTGCATGAACTGGGAATGGAGCTGTGCTCTGAGGCGCTTGAGGAAACGGTTACAAGTGAGGAGGCACAAGCCCTCTTTGAGATGGCTGCAGCTAAATTCCAAGAGGTTGCTGCTTTGGCCCTATTCAACTGGGGAAATGTGCACATGTGTGCCGCAAGGAAACGCATTCCCCTAGATGAATCGGCTCCAAAGAAAGTCATGTCAGCTCAGCTCTGCACAGCTTATGATTGGGTGCGAGATAGGTATGCTCTTGCAGGGAGCAAGTACGAGGAGGCTCTTAAAATCAAGCCGGACTTTTATGAAGGGCTACTTGCTTTAGGCCAGCAACATTTTGAGACTGCAAAGCTTCATTGGTCATTTGCACTAGCAGACAAGGTTGACCTGTCTGCTTGGGATTCTTCACAGACATTCAAGCTTTTTGACAGTGCTGAGCACAAGATGAGGGCTGCAACAGAAATGTGGGAGAAAGTAGAAGAGCAAAGAATGGCAGAATTAAAAGAACCATCTAGCGAGGCACTGAAGAAAAGGAGGAAGCAACATAATGCAGATGGTCAAGGGGAGTTGACTCCAGAGGAGGCAGCTGAGCAGGCAGCAGTAATGAGGCAGCAAATTCACCTGTTCTGGGGTAATATGCTTTTTGAGCGTTCTCAAGTGGAATTCAAACTTGATATCGCTGATTGGAAGAAGAATCTTGATGCGTCCATTGAAAGGTTTAAGTTGGCTGGAGCGTCAGAATCAGATATCTCTGCAGTCTTGAAGAACCATTTTTCCAACACAGTTTCTGAGTGTGAAGATAAGAAAATCATGACTTTAGATACAGGAATCTCCCAAATAAGTAACAATATTGAGGACAAGTGTATCCTTGAAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MGKSGAKKKKPAAAASASAAATKSSPAATEPKAPTQSQPPAANGAAPHLVDPGVLLRRAHELKEEGNRLFQSRDYGGALRQYELALRLAPRGHPDRAVFHSNRAACLLQLRPVDHKAVAEECSLALQAEPLFPRALLRRARALEALGRHELALTDALALLALDPDHQDAVDLVHRLRSRILSPSSSASGSATSTPEPTSRPSPAALGASAVVAGLGPSLPARPFPKKPSPPPPPAQQQQSVPPMSKFNPSPPSPKLVPFSNSPPSSANASAAESSQKVTPTPLVPSSLSLKDKALMDKKVVTRSRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAELRLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPIPTEEEKLEQDNELLVKGEDNPPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADLFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKEPSSEALKKRRKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIADWKKNLDASIERFKLAGASESDISAVLKNHFSNTVSECEDKKIMTLDTGISQISNNIEDKCILES</aaseq>

Gene Sequence

<dnaseqindica>1..2364#ATGGGCAAATCCGGCGCAAAAAAGAAGAAACCCGCCGCCGCCGCCTCCGCCTCCGCGGCCGCCACCAAATCATCTCCCGCCGCAACAGAGCCGAAGGCACCGACGCAGTCCCAGCCCCCCGCGGCCAACGGGGCGGCGCCGCATCTGGTGGACCCCGGCGTGCTCCTGCGCCGCGCGCACGAGCTCAAGGAGGAAGGCAACCGCCTGTTCCAGTCCCGCGACTACGGCGGCGCGCTGCGGCAGTACGAGCTCGCTCTCCGCCTCGCCCCGCGCGGCCACCCCGACCGCGCCGTCTTCCACAGCAACCGCGCCGCCTGCCTCCTCCAGCTCCGCCCCGTCGACCACAAGGCCGTCGCCGAGGAGTGCTCCCTCGCTCTCCAGGCGGAGCCGCTCTTCCCGCGCGCGCTCCTTCGCCGCGCCCGCGCGCTCGAGGCGCTCGGTCGCCACGAGCTCGCGCTTACCGACGCCCTTGCCCTCCTCGCTCTCGACCCCGACCACCAGGACGCCGTCGACCTCGTCCACCGCCTCCGCTCCCGCATTCTATCCCCGTCCTCCTCAGCCTCAGGCTCTGCCACCTCCACGCCCGAACCAACTAGCCGCCCCTCCCCTGCTGCTCTTGGTGCCTCCGCTGTTGTTGCCGGCCTAGGCCCGTCCCTCCCCGCTCGCCCTTTCCCCAAGAAACCATCACCTCCTCCTCCGCCTGCTCAACAACAGCAATCGGTTCCTCCAATGTCAAAATTTAATCCGTCGCCACCATCGCCCAAGTTGGTGCCTTTCTCCAACTCTCCGCCATCTTCTGCCAACGCATCAGCTGCTGAGAGCTCCCAGAAGGTCACGCCGACACCTCTGGTTCCCTCTTCACTTTCGTTGAAAGACAAAGCGCTGATGGACAAGAAGGTTGTCACAAGATCAAGGCCGCTCAAGCTGGTGTACGATCATGATATAAGGCTTGCGCAGATGCCAGAAAAATGCAGCTTCCGAACACTCCGTGAAGTTGTGGCATCACGATTCCCATCGTCCAAGGCTGTGCTGATTAAGTATAAGGATGCTGATGGTGATCTGGTTACCATTACTTGTTCCGCAGAACTTCGATTGGCCGAGTCCTGTGTTGATATAGCTGGCAGTGAGGTGATAGAAGATGGTGCACGGCATGGTCAGAAACTTCCAATGTTGAGACTTCACATTGTTGAAGTAAGCCCAGATCAGGAGCCTCCAATCCCAACAGAAGAGGAGAAGCTGGAGCAGGATAATGAGTTGCTGGTGAAAGGTGAAGATAACCCTCCACATGCTTCAGCAGCTGTGGTGACTGATGCAGAGGTGACGAAACAAGATGTGGAGAATGTAGTTGCTGAAGCTGAACAGAACACCCTGACAGGGAAGAAAGATTGTGGCCATGCTGAGTGCAAGGAAGCTGAAATTGATGATTGGCTTCTTCAGTTCGCAGATTTATTCCGGAACCAGGTTGGTGTTGATGCAGATGCACATCTGGACCTGCATGAACTGGGAATGGAGCTGTGCTCTGAGGCGCTTGAGGAAACGGTTACAAGTGAGGAGGCACAAGCCCTCTTTGAGATGGCTGCAGCTAAATTCCAAGAGGTTGCTGCTTTGGCCCTATTCAACTGGGGAAATGTGCACATGTGTGCCGCAAGGAAACGCATTCCCCTAGATGAATCGGCTCCAAAGAAAGTCATGTCAGCTCAGCTCTGCACAGCTTATGATTGGGTGCGAGATAGGTATGCTCTTGCAGGGAGCAAGTACGAGGAGGCTCTTAAAATCAAGCCGGACTTTTATGAAGGGCTACTTGCTTTAGGCCAGCAACATTTTGAGACTGCAAAGCTTCATTGGTCATTTGCACTAGCAGACAAGGTTGACCTGTCTGCTTGGGATTCTTCACAGACATTCAAGCTTTTTGACAGTGCTGAGCACAAGATGAGGGCTGCAACAGAAATGTGGGAGAAAGTAGAAGAGCAAAGAATGGCAGAATTAAAAGAACCATCTAGCGAGGCACTGAAGAAAAGGAGGAAGCAACATAATGCAGATGGTCAAGGGGAGTTGACTCCAGAGGAGGCAGCTGAGCAGGCAGCAGTAATGAGGCAGCAAATTCACCTGTTCTGGGGTAATATGCTTTTTGAGCGTTCTCAAGTGGAATTCAAACTTGATATCGCTGATTGGAAGAAGAATCTTGATGCGTCCATTGAAAGGTTTAAGTTGGCTGGAGCGTCAGAATCAGATATCTCTGCAGTCTTGAAGAACCATTTTTCCAACACAGTTTCTGAGTGTGAAGATAAGAAAATCATGACTTTAGATACAGGAATCTCCCAAATAAGTAACAATATTGAGGACAAGTGTATCCTTGAAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030328