BGIOSGA030333

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Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030333| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030333, complete gene.| tag = OsI_304...")
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Gene Name

BGIOSGA030333

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030333, complete gene.

LocusTag

OsI_30493

Ensembl Transcript ID

BGIOSGA030333-TA

Ensembl Protein ID

BGIOSGA030333-PA

Length

5084

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2750339..2755422

Sequence Coding Region

2750339..2750648,2750743..2751860,2751959..2752135,2752233..2752346,2753310..2753414
,2753626..2753760,2753843..2753898,2753972..2754077,2754210..2754326
,2754400..2754526,2754610..2754740,2754859..2755422

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2750339..2755422 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2750339..2755422 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAAGGGCGCGCGGTGAAGCTCCGAGAGGCGCACAAGGCCGGCTCGCCAGTCTTCTGCTCCGTTGCGTGGGGCCAAGGCGGGCAGCATGTCGTCACCGCATCCGCCGCCGACGTGGCCATCCTCATCCATGACGCCGCTGCGGTCGCCGCCGCCGGTGGCCGGAGCTCGGGCTCCGCGGCTGCGGCGGCGCTTTCCACGATCCGGCTTCACAAGGATGGCGTCACGGCGCTCGCCGTCGCGCCGGGCTCCGGCGCGTCGCTGGCGTCCGGCTCCATCGATCACTCCGTCAAGTTCTGTTCTTTCCCAGAGGGGGTGTTCCAGAGCAATATCGCCCGGTTCACCCTGCCGATCCGGTCACTGGCCTTCAACAAGAAGGGGACTCTGCTGGCGGCGGCCGGAGACGACGACGGCATCAAGTTGATTGCCACCATCGACAACACCATCTCCAAAGTGCTCAAGGGCCACAAGGGATCGGTAACCGGGTTGTCTTTCGATCCCAGAAACGATTATTTGGCATCAATTGACACCTTCGGCACAGTCATCTTCTGGGATCTCTGCACGGGGACTGAAGCCCGTAGTCTGAAGCGGATTGCGCCGACATTTGGTTCAGACCACTCAATCAACAATGCCCTGTGCTGGAGCCCTGATGGGCAGTTCCTTGCTGTTCCGGGATTGAGGAATAATGTGGTCATGTATGATAGGGACACCGGTGAGGAGGTGTTCACTCTGAAAGGGGAGCATGAGCAACCAGTGTGTAGTCTCTGCTGGTCTCCAAATGGGAGGTACCTAGTCACTGCTGGATTTGATAAGCAGGTTCTGATCTGGGATGTGAAGTCAAAGCAGGATGTTGAGAGGCAGAAGTTCGATGAAAGGATATGTAGCTTGGCTTGGAAACCTGAAGGTAATGCTGTAGCAGTGATCGACGTAACTGGCAGATTTGGCATTTGGGAATCGGTCATCCCGTCGACTTTGAAATCGCCCACAGAGGGTGCACCTGACCTGAACTCTACTAAGGTTCCTTTGTTTGATGACGAGGATGATGAGGAGAGGCCGAGTACCTCTGGTGGACTGGATGATGATGATGATGATGATGAAAGTCTTGGTGAATTAGGTCCATTCAACCACAAGAGATTGAGGAGGAAGTCAACCTATCATGATCACTCAAATGGAGATAGTGAAGATGAGGATCTGATACTTCAGATGGAGTCACGCAAGAGAATGAAAGATACACATAGAGATAACAAGGAGGTTGCTGACAAGGCAATAGGTGATTCAGCAACTTCAGTAAGACTGGTTACAGCAAGAATGCAAACTGCATTTCAGCCTGGGTCCACACCACCTCAACCTGGCAAGCGAAATTTCCTTGCCTACAATATGCTTGGAAGTATCACTACTATCGAAAATGAGGGGCATTCACATGTAGAGGTAGACTTCCATGACACCGGAAGAGGTCCTAGAGTTCCTTCGATGACTGATTATTTTGGTTTCACAATGGCTGCACTGAATGAATCAGGAAGTGTCTTTGCAAATCCATGCAAGGGTGACAAGAATATGAGCACTCTTATGTACCGCCCTTTCAGTAGTTGGGCAGGCAACAGTGAGTGGTCAATGAGGTTTGAGGGAGAAGAAGTGAAGGCTGTGGCTGTTGGTGTTGGATGGGTCGCTGCAGTTACAACTTTAAATTTTCTGCGCATTTTCACAGAGGGAGGGTTGCAGATGCATATCCTCTCAGTCGGTGGCCCAGTGGTTACTGCGGCAGGCCATGGAGATCAGCTAGCGATTGTGTCTCATGCTTCAGATTGTCTTTCATCAGGAGACCAGGTGCTGGATGTTAAAGTACTGAAGATATCTGAATGTGCTCAATCATTGTCCAGCCGACTTGTTTTAACTCCTGCCTCTAAATTATCTTGGTTTGGTTTCAGTGAGAATGGTGAACTTAGTTCCTTTGATTCCAAGGGAATACTGAGGGTCTTTTCTGGTCAATTCGGTGGAAGCTGGATTCCAATATTTAGTTCAATCAAGGCAAGAAAATCCGAAGATGAAAGCCACTGGGTGGTGGGCTTAGATGCTAATAATATATTCTGCATTCTATGCAAGTCCCCGGAGTCCTATCCACAGGTGATGCCCAAACCTGTTTTGACAATACTTGAGCTGTCATTTCCTCTTGCATCATCTGACCTTGGTGCCAATAGTTTGGAAACTGAATTCATGATGAGGAAACTGCATCTCTCACAGATTCAAAAGAAAATAGAAGAAATGGCTGCTTTGGGTCTGGACACGATTGCATTAGATGATGAAGCATTCAACATGGAGGCTGCACTTGACCGGTGCATCTTGAGGCTCATCTCCAGCTGCTGCAATGGTGATAAGCTTGTACGAGCTACCGAGCTTGCAAAATTACTAACACTGGAGAAGTCAATGAAGGGAGCATTGATGCTTGTTACACGCTTAAAACTTCCCATATTGCAAGAAAGGTTCAGTGCCATACTCGAGGAGATGATGCTAAACAATGCAAAAATTGCCAATACATCTGGTGTTTTCTCCAATAGTAATACAAACTACTCACCATCACCAGCGTTGAGCACTCAAGCAGTCCCACCAGCTAAGGTTGTGCAAAATGGAAACAGCTTGAAGTTACCTACATTGCCTAAACTGAATCCTGCCGCCCAACGAAGCAATCCAACTGAATCAAACAAGGCAGAGGTAGAACAAGCAGACAATTTGAAAGAAATCAGTACAAAGGTTTCACCTGCACAAACTCCGTTAGTTAAAATTCCAAAAAACAGTGAAATGGGTGTAAAAACGAAGAAAGATAATGATGGAGCATCACATGCAACTACAGTTGATCAGAACCCAAAGGGAGGCAGTGGTCAGGTTGGCCTTAAAAACAAGAGCGTCGATAGCTGCAATGGTGTACAGCCTCAGCGGCCAGTTAACCCCTTCGCGAAATCCTCATCAAGCAAAGAACAGCCATCATCCCTTTTTGATTCCATCAAGAAGATGAAGGTCGAAAATGAGAAGGTTGACAAAGCTAACAGCAAGAAGGTGAAAGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MKGRAVKLREAHKAGSPVFCSVAWGQGGQHVVTASAADVAILIHDAAAVAAAGGRSSGSAAAAALSTIRLHKDGVTALAVAPGSGASLASGSIDHSVKFCSFPEGVFQSNIARFTLPIRSLAFNKKGTLLAAAGDDDGIKLIATIDNTISKVLKGHKGSVTGLSFDPRNDYLASIDTFGTVIFWDLCTGTEARSLKRIAPTFGSDHSINNALCWSPDGQFLAVPGLRNNVVMYDRDTGEEVFTLKGEHEQPVCSLCWSPNGRYLVTAGFDKQVLIWDVKSKQDVERQKFDERICSLAWKPEGNAVAVIDVTGRFGIWESVIPSTLKSPTEGAPDLNSTKVPLFDDEDDEERPSTSGGLDDDDDDDESLGELGPFNHKRLRRKSTYHDHSNGDSEDEDLILQMESRKRMKDTHRDNKEVADKAIGDSATSVRLVTARMQTAFQPGSTPPQPGKRNFLAYNMLGSITTIENEGHSHVEVDFHDTGRGPRVPSMTDYFGFTMAALNESGSVFANPCKGDKNMSTLMYRPFSSWAGNSEWSMRFEGEEVKAVAVGVGWVAAVTTLNFLRIFTEGGLQMHILSVGGPVVTAAGHGDQLAIVSHASDCLSSGDQVLDVKVLKISECAQSLSSRLVLTPASKLSWFGFSENGELSSFDSKGILRVFSGQFGGSWIPIFSSIKARKSEDESHWVVGLDANNIFCILCKSPESYPQVMPKPVLTILELSFPLASSDLGANSLETEFMMRKLHLSQIQKKIEEMAALGLDTIALDDEAFNMEAALDRCILRLISSCCNGDKLVRATELAKLLTLEKSMKGALMLVTRLKLPILQERFSAILEEMMLNNAKIANTSGVFSNSNTNYSPSPALSTQAVPPAKVVQNGNSLKLPTLPKLNPAAQRSNPTESNKAEVEQADNLKEISTKVSPAQTPLVKIPKNSEMGVKTKKDNDGASHATTVDQNPKGGSGQVGLKNKSVDSCNGVQPQRPVNPFAKSSSSKEQPSSLFDSIKKMKVENEKVDKANSKKVKV</aaseq>

Gene Sequence

<dnaseqindica>1..310#405..1522#1621..1797#1895..2008#2972..3076#3288..3422#3505..3560#3634..3739#3872..3988#4062..4188#4272..4402#4521..5084#ATGAAAGGGCGCGCGGTGAAGCTCCGAGAGGCGCACAAGGCCGGCTCGCCAGTCTTCTGCTCCGTTGCGTGGGGCCAAGGCGGGCAGCATGTCGTCACCGCATCCGCCGCCGACGTGGCCATCCTCATCCATGACGCCGCTGCGGTCGCCGCCGCCGGTGGCCGGAGCTCGGGCTCCGCGGCTGCGGCGGCGCTTTCCACGATCCGGCTTCACAAGGATGGCGTCACGGCGCTCGCCGTCGCGCCGGGCTCCGGCGCGTCGCTGGCGTCCGGCTCCATCGATCACTCCGTCAAGTTCTGTTCTTTCCCAGGTTCTTAGATCTGACTGCCCCGGATGCAATTTCTCCTAATCTCCGTCATTTCCACGGCTATATTTGTGAAATTTTGCTTCGGATTTCCTTCCAGAGGGGGTGTTCCAGAGCAATATCGCCCGGTTCACCCTGCCGATCCGGTCACTGGCCTTCAACAAGAAGGGGACTCTGCTGGCGGCGGCCGGAGACGACGACGGCATCAAGTTGATTGCCACCATCGACAACACCATCTCCAAAGTGCTCAAGGGCCACAAGGGATCGGTAACCGGGTTGTCTTTCGATCCCAGAAACGATTATTTGGCATCAATTGACACCTTCGGCACAGTCATCTTCTGGGATCTCTGCACGGGGACTGAAGCCCGTAGTCTGAAGCGGATTGCGCCGACATTTGGTTCAGACCACTCAATCAACAATGCCCTGTGCTGGAGCCCTGATGGGCAGTTCCTTGCTGTTCCGGGATTGAGGAATAATGTGGTCATGTATGATAGGGACACCGGTGAGGAGGTGTTCACTCTGAAAGGGGAGCATGAGCAACCAGTGTGTAGTCTCTGCTGGTCTCCAAATGGGAGGTACCTAGTCACTGCTGGATTTGATAAGCAGGTTCTGATCTGGGATGTGAAGTCAAAGCAGGATGTTGAGAGGCAGAAGTTCGATGAAAGGATATGTAGCTTGGCTTGGAAACCTGAAGGTAATGCTGTAGCAGTGATCGACGTAACTGGCAGATTTGGCATTTGGGAATCGGTCATCCCGTCGACTTTGAAATCGCCCACAGAGGGTGCACCTGACCTGAACTCTACTAAGGTTCCTTTGTTTGATGACGAGGATGATGAGGAGAGGCCGAGTACCTCTGGTGGACTGGATGATGATGATGATGATGATGAAAGTCTTGGTGAATTAGGTCCATTCAACCACAAGAGATTGAGGAGGAAGTCAACCTATCATGATCACTCAAATGGAGATAGTGAAGATGAGGATCTGATACTTCAGATGGAGTCACGCAAGAGAATGAAAGATACACATAGAGATAACAAGGAGGTTGCTGACAAGGCAATAGGTGATTCAGCAACTTCAGTAAGACTGGTTACAGCAAGAATGCAAACTGCATTTCAGCCTGGGTCCACACCACCTCAACCTGGCAAGCGAAATTTCCTTGCCTACAATATGCTTGGAAGTATCACTACTATCGAAAATGAGGGGCATTCACATGTAGAGGTAAAATCTTCTCACCCTCTATCTTATAAGCCATTGTATCCTCTACTTGTTTGCAGCTTGGATGTGAATAAACCATCCGAAGTTACTTTGTTTTTCAGGTAGACTTCCATGACACCGGAAGAGGTCCTAGAGTTCCTTCGATGACTGATTATTTTGGTTTCACAATGGCTGCACTGAATGAATCAGGAAGTGTCTTTGCAAATCCATGCAAGGGTGACAAGAATATGAGCACTCTTATGTACCGCCCTTTCAGTAGTTGGGCAGGCAACAGTGAGGTAAGTTAACTAAATGAAATTGTTGTTTGCCAGCTTCTGAGATAGGGTTGAAGTTTACCACTTTGGTGCTTACTGGACTAATTTGAAAATTACTTAGTGGTCAATGAGGTTTGAGGGAGAAGAAGTGAAGGCTGTGGCTGTTGGTGTTGGATGGGTCGCTGCAGTTACAACTTTAAATTTTCTGCGCATTTTCACAGAGGGAGGGTTGCAGGTTTTGTAACTTCCTCAAGCTTTGTATTTAAGTCCTTTTTTCCTGATGAATATACTTGTTAGTCAGTTTGTGAAGTTCATTTTTTTCCTGAAAGAAAGCTGACTCCTTATTAGTTCCGAAATACCCAAAAAACCATGTTGTGCCTGGTAATCAGTTTGTGAAGTTCATTTTTTTTCCTGAAAGAAAACTGCCTCCTTATTAGTTCCGTAATACCCAAAAAACCAGGTTGCTTTAGTTTTTTTCAGTGCTATCTACTAGAGCTTTCATAAGGCCAAAATAGCTGTGAAGTATTAACAAAAGAATTTATAGTATTTTAAAAACAATTAATGTTATAGAAGAAAATTAGATTCATGCGACTCTCGACATGTTTCCAATTAAATTTATTGGTCAAGGAAACATTCTATACTACCAACATTTAAATGCTGAAACCATTTTTTATTTCTACATCCAATGTACAGCCGAAATTGTCCCGCCCTAACCATCAGAAGCACAGAAATTGTTGTACTATGTAGCCACTCATGAATTATAACTTGTGGGGCACGAATTATAACTTTGACTTTTTGCACTCAAGAAAATTCAGGGAATGCACTTTCCATGTAGATACTAGTAACTTTTATCACCATTTCTCACCAAGAAGTGGTCTACGGAACACATTTACATTTTTAGATCATTAAAAATGCTGTTCATGACATTGGTCGTGACTTACATAGCAAAGCCAAACTACATATTACTAATCTTGGATGGTTTTTCTTGATACATGCGAGCTGGGGGTTACATAAGCATTCATGAATCTGATTTACATCATTCCCTGTTTGTTACTTGAAGTGGGAAAAATTCAATTTAATTTACTCATTTTATATTGTACTTTTACCTAGCATGTCTTGATTTTCAGATGCATATCCTTGGTCCGTGGCCCAATTAAAAACTCTTTAAGTTTTGTCAAACACATCTCTTGATTTTCAGATGCATATCCTCTCAGTCGGTGGCCCAGTGGTTACTGCGGCAGGCCATGGAGATCAGCTAGCGATTGTGTCTCATGCTTCAGATTGTCTTTCATCAGGAGACCAGGTATTCAGTATATGTTCGTTTGACTTTTGGAGCTTTGTGTAGTGATGATATATGTTGTAGCTAGCTATCACTTATCAGATTGTCAGCACCTCCTAGTGTACCATGATTCCAATCGTGTGAACCAATTCACAGTACATATGAACTGATGGTTGAAATGGTACTACAAGATTCTGAATTGAAACATGGATTTGTTCATGATTAACCCTTTCAGGTGCTGGATGTTAAAGTACTGAAGATATCTGAATGTGCTCAATCATTGTCCAGCCGACTTGTTTTAACTCCTGCCTCTAAATTATCTTGGTTTGGTTTCAGTGAGAATGGTGAACTTAGTTCCTTTGATTCCAAGGTATGACCAATGAACACTGTCAACAATTCAACATATCTTTAGTTATATCATGGGAGTTTTAAACTGAATATGTTATTTCTAGGGAATACTGAGGGTCTTTTCTGGTCAATTCGGTGGAAGCTGGATTCCAATATTTAGGTATAGTATCTGCCTGACAGGTTATGCATTTTACTACTAGCAAAGCACACTTAATAATTATATCCAACTGCAGTTCAATCAAGGCAAGAAAATCCGAAGATGAAAGCCACTGGGTGGTGGGCTTAGATGCTAATAATATATTCTGCATTCTATGCAAGTCCCCGGAGTCCTATCCACAGGTATGCCTAAATGCAACTTCTCATGTGTACAACTTTTGAGTGTTGATGTTCCAACAAAAATAGTACTTCTATATGCAATTCTCAAATATTGAAATTTGTTTGTCGTTTGACGTCTTTGACTGATCTTATCAGGTGATGCCCAAACCTGTTTTGACAATACTTGAGCTGTCATTTCCTCTTGCATCATCTGACCTTGGTGCCAATAGTTTGGAAACTGAATTCATGATGAGGAAACTGCATCTCTCACAGGTGCACCGTGTTTCTTTCAGTTTTGAAGGGCAGTATCTGTGATATTGTTCTTAATCGTTGCTGTTTATCTCAGATTCAAAAGAAAATAGAAGAAATGGCTGCTTTGGGTCTGGACACGATTGCATTAGATGATGAAGCATTCAACATGGAGGCTGCACTTGACCGGTGCATCTTGAGGCTCATCTCCAGCTGCTGCAATGGTACAAGACTTGAACTATGCTTTTTACCCATAAATAGTGCTTTGCATTAAATTATTTCTTGTTTTATTTCTTGATTTCAAAAGGTGATAAGCTTGTACGAGCTACCGAGCTTGCAAAATTACTAACACTGGAGAAGTCAATGAAGGGAGCATTGATGCTTGTTACACGCTTAAAACTTCCCATATTGCAAGAAAGGTTCAGTGCCATACTCGAGGTGAAATTCACAACCCTTATACTGAACCTGCGTACTTTTAGCACTCTAAAAATGGCACATTCAATATTTAAGAATTTATCATATGTTCAACTGAAGGTTATGCAATGGCTTCTTGTAGGAGATGATGCTAAACAATGCAAAAATTGCCAATACATCTGGTGTTTTCTCCAATAGTAATACAAACTACTCACCATCACCAGCGTTGAGCACTCAAGCAGTCCCACCAGCTAAGGTTGTGCAAAATGGAAACAGCTTGAAGTTACCTACATTGCCTAAACTGAATCCTGCCGCCCAACGAAGCAATCCAACTGAATCAAACAAGGCAGAGGTAGAACAAGCAGACAATTTGAAAGAAATCAGTACAAAGGTTTCACCTGCACAAACTCCGTTAGTTAAAATTCCAAAAAACAGTGAAATGGGTGTAAAAACGAAGAAAGATAATGATGGAGCATCACATGCAACTACAGTTGATCAGAACCCAAAGGGAGGCAGTGGTCAGGTTGGCCTTAAAAACAAGAGCGTCGATAGCTGCAATGGTGTACAGCCTCAGCGGCCAGTTAACCCCTTCGCGAAATCCTCATCAAGCAAAGAACAGCCATCATCCCTTTTTGATTCCATCAAGAAGATGAAGGTCGAAAATGAGAAGGTTGACAAAGCTAACAGCAAGAAGGTGAAAGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030333

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030333&oldid=29537"