BGIOSGA030347

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Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030347| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030347, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030347

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030347, complete gene.

LocusTag

OSJNBA0017O03.10

Ensembl Transcript ID

BGIOSGA030347-TA

Ensembl Protein ID

BGIOSGA030347-PA

Length

4863

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2959911..2964773

Sequence Coding Region

2959911..2960160,2962020..2962162,2963254..2963397,2963573..2963758,2964016..2964140
,2964545..2964773

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2959911..2964773 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2959911..2964773 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGCTCCTTCTCCGGGCTGAACGCGCTCTACGACACCGTCGGCGGCGGCGGAGGCGACATCTGGGTCAACGACTACCGCTTCCGCGTCGTCCGCAGGCTCGGTGACGCCGGGCCAGCGGGGTCCTTCGTCTTCCTTGTCAAGGAGGTTGTCGCCGCCGCCACCGCCTCCGACGGCACTGGTGGGGCGGTGCCCGGCGCCTCTGGGCTCGCCAAGAAGAAGGGCATCGATCCATCCCACATCTCAGCTGATGGAACATATGCCTTGAAGAAAGTTCTTATTCAGAATGAACAGCACTTAGAGCAAGTTCGACAGGAGATCCGAGTGTCCTCTCAATTCAGTCATCCAAATCTACTTCCTCTTCTTGAAAATGCTATTATTGCAGTTAAGGGTGTGCAAGATGGGTTGCAGAATCATGAGGCTTACTTGTTGTTCCCAGTTCATTTGGATGGAACCTTGCAAGATATCAATAAAAATATGCTAGAAAAGAAAGAATATTTTCCAACAATCAGTATTCTCCAAATATTCCGCCAGCTATGTGCAGGACTGAAACATATGCACAGTTTTGACCCACCTTATTCTCATAATGGGGTTAAACCAGACAATGTTCTCATAACTCAGAGGAAGGATCAACCTCATCTTGCCATCTTGATGGATTTTGAAAGTGCCCGTCCTGCAAGAATAGCCATTAGATCACAAGCAGATGCTATGCAGTTACAGGAATGGGCATCAGAGCACTGTTCTGCACACTACCGAGCTCCTGAATTGTGGGAGTGTCCAACTCATGCTGACATTGATGAGAGGACAGATATATGGTCTTTGGGATGCTGTCTTTATGCAATGATGTACGGAAAATCTCCATTTGATTATGAACTTGATGAAGCTGCTGGTGAGAGCTTACAGTCAGTTACAAAGAGTGCTCAAATTAAATGGCCTAATGAAGCTGGCCCCTCGTATCCTGATTCTCTCCGCCAGTTTGTAACTTGGATGCTGCAGCCTCATCCTGCAGTTCGTCCCCACATTGATGATATCATCATCCACGTTGATAAGCTCATTGCAAAGTACTCAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MGCSFSGLNALYDTVGGGGGDIWVNDYRFRVVRRLGDAGPAGSFVFLVKEVVAAATASDGTGGAVPGASGLAKKKGIDPSHISADGTYALKKVLIQNEQHLEQVRQEIRVSSQFSHPNLLPLLENAIIAVKGVQDGLQNHEAYLLFPVHLDGTLQDINKNMLEKKEYFPTISILQIFRQLCAGLKHMHSFDPPYSHNGVKPDNVLITQRKDQPHLAILMDFESARPARIAIRSQADAMQLQEWASEHCSAHYRAPELWECPTHADIDERTDIWSLGCCLYAMMYGKSPFDYELDEAAGESLQSVTKSAQIKWPNEAGPSYPDSLRQFVTWMLQPHPAVRPHIDDIIIHVDKLIAKYSI</aaseq>

Gene Sequence

<dnaseqindica>1..250#2110..2252#3344..3487#3663..3848#4106..4230#4635..4863#ATGGGGTGCTCCTTCTCCGGGCTGAACGCGCTCTACGACACCGTCGGCGGCGGCGGAGGCGACATCTGGGTCAACGACTACCGCTTCCGCGTCGTCCGCAGGCTCGGTGACGCCGGGCCAGCGGGGTCCTTCGTCTTCCTTGTCAAGGAGGTTGTCGCCGCCGCCACCGCCTCCGACGGCACTGGTGGGGCGGTGCCCGGCGCCTCTGGGCTCGCCAAGAAGAAGGGCATCGATCCATCCCACATCTCAGGTCTCCTCTTTGTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCTCTCACCCACATGAACTCAGATCTGAGGGTGGTTCGGTTGGATCGCGCGTGAATGGATTTGGATCTGCTCAATGTCTTGATTGGTTGGATGGATCATTATGTGTCACAAGAATGAGTTTTCCTTTTTATTCAGATCAACGCATGAGTTCTCTCATTTCTGTTAAATCCACGCAGCCTCAGTTTCTGTTAAGGTGGTCTATTGAGGATTCTTTAGTTTAGAGTAAATTTCACAAAACTACACGTTTTGTAGTCCAAGTTGCAGAAAACCACACACACTTTGACACTTGGCACTTAAATACATATATTTTGGTAGTGTATGGTAGTGTAGTTTCACAAAATCACACTATCAATGAATAGATTCACCCGTGAGATGACGTGACTATTTCATCTAGGATGAGGACATGTCATCCTATTAACCGCCATCGCACGAAATTAATAGGATGCCGTCTTCATCCTAGATGGAACGACCACGTCATCTCACGGGTGAATCTATTCATCGATAGTGTGGTTTTGTGAAACTAAACTACCAAAATATATGTACTTAAGTGCCAAGTGTCAAAATGTTTGTGGTTTTCTACAACTTGAACCATAAAACATGTAGTTTTGTGAAATTTACTCTTTAGTTTATTCTGGTAGTCATGTCGATGCCCATATGAAATTTCCCCCTTTTTCGGATGGAAGCTAGTATTAACTTTTCAAGAAAGCTGAGACATATTGTATGACTAGCTGCTAACCACGCTTTCCACGTGGTCTCGTAACTCACTTCATAATTTGGTAGCCTTGTCACATTGGAGTAATTTATATTCCTCATTTTAGCAATCTCAGTCGGTGATCAGTGTGCTAGGAGACAATCCGGCCCACTAGGCATTAATTTTTGTTGACATTACCTTAAAAGTCTTTGTGATTATCAGCAAACGTCAATACCAGGTACGGTGAACATTCCGTTTCTAGCTTAATCATTTATTTTCTAACTTAAGCTCTGCTTGGCTTAGTTTGTGATTTTTCATTTTACTTTGATATTAGAATTAGTTATAAGGCTTCTCTGTCACTTGTTGACATTCAGGATATAAATCTTAGATCAGCGCTTGCAATGGCTACTTCACCGCCCTAATTGTTATCAGTTGTGGCATGTGAGGCTGACCATTTCATGAAGACCAATTCGTGCAGAAGAATGAGAAGAAAGCTTTTAACTCAATTATTACCTTGGTTGGTTGGGAGATTTGGACACATATGAACCCTATTGTGTTTTTAATGGTGCAACCCCTAGTGTGGCGACTGTTGTTATTCAAATAGTGGCTAATGAAGGAGCACTTCGGTGCTTACCTGGAGCCTCAAAGCTCCAAGATTTGTTTGCTAGGTCGATGGCCCTTGTGCCCTAGGGTATTTGTTTATGGTTGTCTTTTTTTTTTTTTGTAAGACATGTTGGTGTGGGGGTGTTTTTTTTTCTCTCTCTAATTCCCCACCCTTTGTTCTTTTCTCTCTTGCTTAATGAAATGATGCGCATATCTCCTGCTTGTTCCAAAAAAAGGAATGGATCTAGGCAGCCTAGATTGCTAGATAGGAATTGCACATAAAGATAAATGGAGCAAACTCAATTTACTGGATAATAAAGTCAGGAATCAATAGCAAATAGGTTTGCAATGTACCGATCACAGGCAATAACCAAAGTATACCTGAATAGCAAAACAGCCTAAATAAAACCTAACCTAAATCTGTTTTATTTTTCATGTACCATTGTGTTTTGATAGCTCTGTTGTGCTTGGTAATCTGACTTTCTTTTTATGCTTATTATTTCTGTACTTTGATTTTTCAGCTGATGGAACATATGCCTTGAAGAAAGTTCTTATTCAGAATGAACAGCACTTAGAGCAAGTTCGACAGGAGATCCGAGTGTCCTCTCAATTCAGTCATCCAAATCTACTTCCTCTTCTTGAAAATGCTATTATTGCAGTTAAGGTAAGATGGGCTAAAGAAATCTAGTGACTATTTCCTGATGATTACAGTTTTACTGTTTATCTTCCATCATCTATGCATAATTACATGGTAATATCGAACCTTTGGTCTCTATGCACACCAAGTTGAAATGTCACTCCCTCCGGTCACGGGAACATATACTGCAAAGTCTAAATTGCAACATTCACCAGTATTTTTCTTTATGATATATCTATAGAAACCAGTAAAATTAAAATACTATTTAAGTACTTTCTGAACATATATATGCACATGATTTTTATGCATTCAATCGTAATATTTTTAAAGACATTGATTCTCAAAGTTTTAGAAATTTTACTGGATGCATGCCCACAAGGACATGTTTTTGTGACCAGAAGAAGTAATTCATTTTTTTAATATTTTCATTCTAAAGCAGTCAAGTAGGCATGTTCAATCCATATCAAACTCTATATACAAATGCTTATCGCAATTTCTTTAATGTGCTGAATAAATGCCCCAGTTGTTGCTATTCTGCTGCTAGGATCTCAGAAAAGTAGTTTCTAGGGCAGATGTATCTGGATACAGTTTCAATCTCTTCTTGCAATGGATAAGCTTTTCTTTAGGTGGTTATTTATATTACAAATTAGTTTTCTTTAGCAAGTGAAAATCTCAGTACAGGGAATGTGTATGCAAGTGAATTACAGTGTACAATCACAGAAGCTGAGATCCATTAATCCTCTTTAAGCACTCATGCACAAAAGAACACCAAGATTGGTAGTAGATGCAATAAACTGCACTCATGATTTTGAACTGGTAAAGAGATATACTTATTTACCTAGTTTGCATACCTTTATCCGGATATCGAAAATTGGGTATGTAGTTTCACAGTGCGCCAGTTATGTGCAACCGGCATTGGCACACTGGGCGGAACCCTGGAACATTGATATTTCTGAGAATTGAAACCCTGAGACTCACACTACTCTATATGTATGCTTCATTTGTTCTTGGAGTTCCCATTAGAAGTTCTGTATAGTACACACTTGTGCTTACTTATCCTTCCACTGCCCTTTAAATATATGTGTCATTAAAAGCAGTTGTTTTTTGTATGGGTGTAGGGTGTGCAAGATGGGTTGCAGAATCATGAGGCTTACTTGTTGTTCCCAGTTCATTTGGATGGAACCTTGCAAGATATCAATAAAAATATGCTAGAAAAGAAAGAATATTTTCCAACAATCAGTATTCTCCAAATATTCCGCCAGGTAAATGCTTCATCTTCAGCTTCTCCCATGATGTAGTATAACATAAAGAATTGCAAAATTTACGAATGGCTGAAATGGCATTTTGTCTCAATCTCCTTTGGGAATTATATCAGCTGTTGGTAGCTATTTCTTGCCAGAATTGGGCTATTATTTATATGATTTGTGTTGCCTACAGCTATGTGCAGGACTGAAACATATGCACAGTTTTGACCCACCTTATTCTCATAATGGGGTTAAACCAGACAATGTTCTCATAACTCAGAGGAAGGATCAACCTCATCTTGCCATCTTGATGGATTTTGAAAGTGCCCGTCCTGCAAGAATAGCCATTAGATCACAAGCAGATGCTATGCAGTTACAGGTACCTTTCTGTCTATTTAAATATGCAAAACAAACCCTTAGTTCCATTTATATTACAGCTTGTTGAGATAGACAGATTGTATGGAAAGTTAGCATAAACGACACATGGAAAATTCTGTTCAACAGCTTTTTAGTCATTAACAGGCACTGGAAAATCATTTGCAGCAAATATCATGCTATCTTTAATCTTGGTGGTTTTATATTTAAATATAATGAGCAATGGATTTACTATTTTGGCTCCGAATCGTATTCATGCAGGAATGGGCATCAGAGCACTGTTCTGCACACTACCGAGCTCCTGAATTGTGGGAGTGTCCAACTCATGCTGACATTGATGAGAGGACAGATATATGGTCTTTGGGATGCTGTCTTTATGCAATGATGTAAGATTTTCTTATGCAAAACTGGCCATTGGCCTTATCATTTAAGTTAATCTCTCCATACTTAGCAATTGACTGTATGAATTTTTAGGATTCACTGCAGTTGTATTGCCTAAATGAAACATTTTAAGGAATTTATCAAAACATCAAGTATCAAATATTCTATGTTCTGAAAAAAAAAATACTACTATGGTAGTTATGTAGAAAGTACCCCATGCATTAGAGTCTCAGAAAAAAAAGGTCTTCCTCGTCCCTCAATTCCTGCCTTGGTTTGTTTTCGTCCCTCAAATATAAAACCGTGTAAAACCAACAGTTTCATACTGCCCCTTGAAGGCTAACTTATTTGCTGAATGTTGTATGTTACATTGTACGTTCTAGGTCATTTAACCCTATTATTGTTTTTATAGGTACGGAAAATCTCCATTTGATTATGAACTTGATGAAGCTGCTGGTGAGAGCTTACAGTCAGTTACAAAGAGTGCTCAAATTAAATGGCCTAATGAAGCTGGCCCCTCGTATCCTGATTCTCTCCGCCAGTTTGTAACTTGGATGCTGCAGCCTCATCCTGCAGTTCGTCCCCACATTGATGATATCATCATCCACGTTGATAAGCTCATTGCAAAGTACTCAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030347