BGIOSGA030361

From RiceWiki
Revision as of 09:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030361| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030361, complete gene.| tag = OsI_305...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030361

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030361, complete gene.

LocusTag

OsI_30542

Ensembl Transcript ID

BGIOSGA030361-TA

Ensembl Protein ID

BGIOSGA030361-PA

Length

6613

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:3532196..3538808

Sequence Coding Region

3532196..3532798,3532988..3533131,3533413..3533538,3534095..3534182,3534391..3534484
,3535091..3535184,3535554..3535608,3536096..3536187,3536316..3536486
,3536637..3536693,3536951..3537035,3537366..3537427,3537679..3537753
,3537872..3537976,3538346..3538487,3538735..3538808

Genome Context

<gbrowseImage1> name=IndicaChromosome09:3532196..3538808 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:3532196..3538808 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGATGATGGCTGATCTCAGCTTCTCATCATCTATCTCCAATGTGAAGCTCCAAAGGTTCAGGGCATCATCGAATGAGACATCTTTGATTAAGAGATCTCCGGTGTTCCGTGCAGAAGCTTGGTCAACTGAAACTGAGAAATTCGGTACCAATGGCCGCGCGATAAAGATGGTCCCGACAACAGAGTTGAAAAGGAGCAAGAGTGGTGTCCGAGTAAGGCCAGACACAGTTAATGGCTCTCCAAGTGGTGCTGTCAATGGCTCAACCAAGGTGGCCATCAATGGTTCTCCTAATGCTGCTGTCAATGGTTCGATGAAAGCGGTAACTAATGGTTCTGTTAATGGGACTAGTTTGGTTAAAGGTAGCAATATGTCTGCTCTAGTGAAGACCCAAAAGCGAATGAGACCCAATGATGATCCCTTTGAAGAGGAGCTGAAGGTTTTGCCCTCTGATGAAGGATTCAGTTGGGCAAAAGATAATTACAACTCGTGGCAGAGGAGTGCAGATATCTGGTCTTTTGTTCTTTCTTTTCGAATCCGCGTTCTATTCGACAATGCCAAATGGGCCTACGCAGGTGGATTCTCGGAGGAAAAACAGAAAGTTCGGAGGAGGAAAACTGCTTCATGGTTAAGAGAACAAGTATTGCAGCTTGGCCCAACTTTTATTAAGCTTGGACAGTTATCTTCGACAAGATCTGATCTGTTTCCAAGGGAATTTGTGGATGAACTTGCAAAATTGCAGGATAGAGTACCCGCATTTTCTCCTGAGAAGGCAAAGGCTTTCATAGAGAAAGAAATGGGTTGCCCAATTGAAGTTGTGTACAAGGAATTTGACAATCGTCCGATAGCTGCTGCCAGTCTTGGTCAGGTACATCGTGCAGTGCTTCACAATGGAGAGAGAGTTGCAGTTAAAGTGCAGCGACCAGGGCTCAGAAAACTTTTTGACATTGACCTAAGGAATCTAAAACTAGTAGCTGAGTATTTTCAGAGCAGTGAGGCATTTGGTGGTCCTTCAAGGGATTGGATTGGTATTTATGAGGAATGTTCCAAAATTTTGTATGAAGAAATTGATTACATCAATGAAGGAAAGAATGCTGACAGATTTCGCCGAGATTTCAGAAATATAAAGTGGGTCCGTGTGCCACTTATCATGTGGGACTACACAACTGAAAAGGTGTTAACCCTCGAGTATGTTCCTGGTATTAAGATAAACAACTTGACTTTGTTGGATAATCGGGGATATAGTCGTTCCCTGATTGCATCTCGTTCAATAGAATCTTATCTTATTCAGATACTGAAGACCGGTTTCTTCCATGCTGATCCGCATCCTGGAAACCTTGCTATAGACACGGATGGCTCTCTTATATATTATGATTTTGGAATGATGGGTGAAATAAAATCATTCACTCGGGAGAGATTACTTTCCTTGTTTTATGCTGTGTACGAGAAGGATGCAAATAAGGTTATGAAAGCTCTAATTGACCTAGAAGCCCTCCAGGCAACAGGAGACCTTTCACCGGACTTGTTTGCAATATCACAGGATCAACCTTTTCGTTTCCCATCCACATTTACATTTGTCATAAGGGCATTCTCAACTCTTGAAGGGATTGGATATATATTGGATCCAGATTTTTCCTTTGTGAAAGTTGCCGCACCTTATGCACAGGAACTTCTAGACTTGAAACAGAGACGAACAAGTGCACCTGAACTAGTCCGGGAGATAAGAAAGCAAGCAAACAGTGCTCGTGACTCTACCATCTCAATGCCCTACAGAATACAGCGAATTGAGGATTTTGTTGGGCAACTTGAGTCCGGTGATCTGAAACTTAGAGTCAGAGTACTCGAGTCTGAAAGAGCTGCTCGTAAGGCGAATGTACTTCAAATGGCGACCATGTATACAGCCATTGGTGGCACGCTGTTGAACGTTGGGGTCACATTGAGTAGCCAAGGGAACCAAATAGTCGCAAACGGGTCTTTTGTTGGCGCAGGCATATTCTTGGCATTGCTCATAAGATCTATGCAGAGAGTGAAGAAACTCGACAAATTCGAGACAATGATATGA</cdnaseq>

Protein Sequence

<aaseq>MAMMMADLSFSSSISNVKLQRFRASSNETSLIKRSPVFRAEAWSTETEKFGTNGRAIKMVPTTELKRSKSGVRVRPDTVNGSPSGAVNGSTKVAINGSPNAAVNGSMKAVTNGSVNGTSLVKGSNMSALVKTQKRMRPNDDPFEEELKVLPSDEGFSWAKDNYNSWQRSADIWSFVLSFRIRVLFDNAKWAYAGGFSEEKQKVRRRKTASWLREQVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKAFIEKEMGCPIEVVYKEFDNRPIAAASLGQVHRAVLHNGERVAVKVQRPGLRKLFDIDLRNLKLVAEYFQSSEAFGGPSRDWIGIYEECSKILYEEIDYINEGKNADRFRRDFRNIKWVRVPLIMWDYTTEKVLTLEYVPGIKINNLTLLDNRGYSRSLIASRSIESYLIQILKTGFFHADPHPGNLAIDTDGSLIYYDFGMMGEIKSFTRERLLSLFYAVYEKDANKVMKALIDLEALQATGDLSPDLFAISQDQPFRFPSTFTFVIRAFSTLEGIGYILDPDFSFVKVAAPYAQELLDLKQRRTSAPELVREIRKQANSARDSTISMPYRIQRIEDFVGQLESGDLKLRVRVLESERAARKANVLQMATMYTAIGGTLLNVGVTLSSQGNQIVANGSFVGAGIFLALLIRSMQRVKKLDKFETMI</aaseq>

Gene Sequence

<dnaseqindica>1..603#793..936#1218..1343#1900..1987#2196..2289#2896..2989#3359..3413#3901..3992#4121..4291#4442..4498#4756..4840#5171..5232#5484..5558#5677..5781#6151..6292#6540..6613#ATGGCGATGATGATGGCTGATCTCAGCTTCTCATCATCTATCTCCAATGTGAAGCTCCAAAGGTTCAGGGCATCATCGAATGAGACATCTTTGATTAAGAGATCTCCGGTGTTCCGTGCAGAAGCTTGGTCAACTGAAACTGAGAAATTCGGTACCAATGGCCGCGCGATAAAGATGGTCCCGACAACAGAGTTGAAAAGGAGCAAGAGTGGTGTCCGAGTAAGGCCAGACACAGTTAATGGCTCTCCAAGTGGTGCTGTCAATGGCTCAACCAAGGTGGCCATCAATGGTTCTCCTAATGCTGCTGTCAATGGTTCGATGAAAGCGGTAACTAATGGTTCTGTTAATGGGACTAGTTTGGTTAAAGGTAGCAATATGTCTGCTCTAGTGAAGACCCAAAAGCGAATGAGACCCAATGATGATCCCTTTGAAGAGGAGCTGAAGGTTTTGCCCTCTGATGAAGGATTCAGTTGGGCAAAAGATAATTACAACTCGTGGCAGAGGAGTGCAGATATCTGGTCTTTTGTTCTTTCTTTTCGAATCCGCGTTCTATTCGACAATGCCAAATGGGCCTACGCAGGTGGATTCTCGGAGGAAAAACAGGTATGCTTTTATGGTACAAATAAGCTTTAGTTAAAGAATTCTGCATTCCCTTTAAAGTTTCCTATGCGAAAGCTTTACCTTTTTTGTGGAGTAACTGGTAATTATAATGGATCACAGAGATTTGGGTTGCTAAAATGAAAAGATATTTATTTTTTGTATACGTGGACTAAATCATCCCATATATCACAGAAAGTTCGGAGGAGGAAAACTGCTTCATGGTTAAGAGAACAAGTATTGCAGCTTGGCCCAACTTTTATTAAGCTTGGACAGTTATCTTCGACAAGATCTGATCTGTTTCCAAGGGAATTTGTGGATGAACTTGCAAAATTGCAGGTATTTATTTTTTGTGATTCCATATCAAATTCTTAATTTATTTGCTAACTCTACTGTGTTTGTGTTAACCTCCAACTGCTCTAGTATTTTCTGTATTCCTCTTGTTGATTTTTTAGCTCTCCAGTAAACTGATTGTAATTTCATAATAATGAATGAAAGGACACAATTATTATTGTAATGATGACCGACAAGAGAATTATCTATAGTAGTAAACCAAAATCAAAACAGTTCATTAGAACTTAGAAAAGTATATATATTGTAACTTCCGGTTTTTTGTGCAGGATAGAGTACCCGCATTTTCTCCTGAGAAGGCAAAGGCTTTCATAGAGAAAGAAATGGGTTGCCCAATTGAAGTTGTGTACAAGGAATTTGACAATCGTCCGATAGCTGCTGCCAGTCTTGGTCAGGTGCTTAGTTTTGCACTCTATCAAAACATAAATCTGATCTTCTCAGTACCAATCAGTGTATATCATACTATATCACCTTTTTCTCAAGGATTTTTTCTATACATTTTACTTGTTCAATTCCTCTATATCATACATTTTCTATACATTTTTTCTATATCTTACTATATCACCTTTTTCTCAAGGATTTTTTCTATACATTTTACTTGTTCAATTCCTCTATGAAAGCCAACAGCTGCTGCTAGTCCTCTGCATGTTTTTGTTTCAAGTTGTAAAATTACATTTCACTATATGCTTTTCATATCGTATTGGCCAATATTTTCTTCACTACATGTTTCTCATATCTGTATATGTCAATAAATGCCTACCATTTCTGCTCATTCTCACCTGATTCCGGTTGTCCTTTCCTGTTATACTACTGGTCCATGTTTGTTTTTTGAGGGGAAACAGCGATACTTATTAATAAGCTACAAAATTTGGTGTCCTTGACAATCTTCATCCTATCTTCTTTATTTATAAATAAAATCTGCTTACAGGTTCCTTCATATATATTGTTCAGGTACATCGTGCAGTGCTTCACAATGGAGAGAGAGTTGCAGTTAAAGTGCAGCGACCAGGGCTCAGAAAACTTTTTGACATTGACCTAAGTAAGAGAAATTATTACCTTTTGACATTCTACCCTTTTGCGTTTGTTTATTATCCTTTTACTCTTTACTATTTTTTTCTCAAAATATGATAATAACGTAATTTAAAATGCTTGTTTTTCAAGAAAAAAATTAGATGGCTTTAATATGAAATAACTCAGTTGTTGTTTAATGTTGATAATAGTTTTGATTATTCTTTGGAATCTTGTAGGGAATCTAAAACTAGTAGCTGAGTATTTTCAGAGCAGTGAGGCATTTGGTGGTCCTTCAAGGGATTGGATTGGTATTTATGAGGAATGTTCCAAGTAAGTAGCAATATAGTCTTCTTGGATCATTGAATGTATTCTATTGACTTGATATTTTTATTATTTGACATCTCTAGAATACATCCCAACCTTTTCTGCCAAAAACTTTGTTGGAATTGTGTGGAATAACTAGTTCCCTACCATAGCACCTGATATTGCAACCTCTATCGTTCTTCAAATAAAAACAGTAGTACAGTACTACCTCAGTCCCGAAATATAAAGGATTTTGGCAATGCACCTGGATAAGTGTTTGTCAAGGTACGTTATTGGAACACCTTATATTTCGACGGAGGTAGTATTGCTTATGCTGTTCACCATGTGAGTCCATTATTAAATCAATAAATGAACCTGTCCTTTGGAGGGGAACAAAGACCTTGAATACGTCATAGATTGAGGTATAAGGACTAATGGATGGAAGATATTTGGTTAGAAACTTTTTGCAATATCTGTAGGGCTATGCTTTAGAAACTTTTTGCAATATCTGTAGGGCTATGCCAATTTTTGTTTATTTACAGATTTCTGAAATTATTGTAGCTTCCACAGTCCATATATTTCTTCAGAAAGTGAGTTGACATAAGAATTGACCATCATGATTTGTGATTTCAGAATTTTGTATGAAGAAATTGATTACATCAATGAAGGAAAGAATGCTGACAGATTTCGCCGAGATTTCAGAAATATAAAGTGGGTCCGTGTGCCAGTACGTTTCTTCAAACTCAAAACACAACTTGTTTTTGGGTTTTGTTTCCATGCTTGACTTCGCTTATATCTTTTAAGAGGCCATATATTAATCTGCCTAGTCCTGTTTCAAACCCATATTTGTAATCAATCTGATTGTGTCGACATTCTTCCACCACCATGGCATCCTCCTATAATCACCTCCTTGATCTCATTGACATCTGCATGAAAACCATGGTTAGTTGTTAAAAAACATGCAGCAATGTCTTTTTTTCCCCGTTTATTACTGTAGTGCCATGTCTCTTGTCAACATTGAAGGCATCATTTGGGTGTGTGTGGTGTGTCTTTTTCCTGAAGTTTTACATGAATAATCGTTATGTTATTTTTCTAGCTTATCATGTGGGACTACACAACTGAAAAGGTGTTAACCCTCGAGTATGTTCCTGGTATGTGCTAGTTATTTCTTGTAACAGAAATTAGTATGTATAGTGTTGAATTGGACTGACTATTGTTCTTTGGATAGTTTGTACATAACAATTATCTCAATTTCATTTGTTAATTGCTAATATATGAAAATAAAATTATGACAGCATTCAAAATTAGATTATTTATTTTAATGTGTTCTTATACTTCCTCCATTTCATGGTTGTCAAATCCATATTATCAGTTTCTTGTTATTCAAATCTGACAATAAAATTTCTGTGCTTCATTAATCTGATTATTTTCATACTCAAGTATTGCTACTACACATATTTTTCCTTCTAAAATATACAATTAAGATCTGACAGTGATTGTGAGAGGATGGTTGTCCTTTCAATCAAAACTTGGTAGAATATGTTTTTTTATTAAGAGAATGCTTTTATTTGTAGAACCTGCTCTTACCGCAACTTTATCTTAACTATTTGGCTTTACTCAATCTCTTAATTTTTACAGGTATTAAGATAAACAACTTGACTTTGTTGGATAATCGGGGATATAGTCGTTCCCTGATTGCATCTCGTTCAATAGAATCTTATCTTATTCAGGTAGATATATTTCAAGAATTTGACTTCCGATGGTTTGTATATTTTTTAATGCTCAATGTCTATTAGAGACGAGTTGAATATCATTTAATGTGGTGGTTTCCTCTAAAGTTCTTCATTGTACCACACAGATACTGAAGACCGGTTTCTTCCATGCTGATCCGCATCCTGGAAACCTTGCTATAGACACGGATGGCTCTCTTATATATTATGATTTTGGAATGATGGGTGAAATAAAATCATTCACTCGGGAGAGATTACTTTCCTTGTTTTATGCTGTGTACGAGAAGGATGCAAATAAGGTATCTCAATATTTTCATACGAACAGCTCATATACAGCAACATTTCTCTCTATTTTTTATGATTTTACCTAGCATGCTATTGCAAGTTAAGTTGCCCAAATCACTAGGCACTTCATCTTTCTCTCAGTCTCATTCAGCTCTATCTTGCAGGTTATGAAAGCTCTAATTGACCTAGAAGCCCTCCAGGCAACAGGAGACCTTTCACCGGTTTGTAGAACATTGTAGTTATCAGATGGGAATTCCTGGAATAATTGCATTTAAAATATGCCCTTTCCCCCTTTTCTTTGGTTATTTAGGTTAGAAGATCCATACAATTTTTCTTGGACAATCTGCTGAGTCAGACACCAGACCAACAGCAAACTTTGGCTGCAATTGGAGAGGTTGTCTGGCCTTACAATTTTCTTAGGATTAGCTTTATAAACTGGGATATTTTAGTTAATATATTATTTTTCTTCCCTTTGCAGGACTTGTTTGCAATATCACAGGATCAACCTTTTCGTTTCCCATCCACATTTACATTTGTCATAAGGGCATTCTCAACTCTTGAAGGTTCTCTTTTTCTTTATATATCTATATTCCGGAGATAATTATCATTATCTGCATTTCTCTTCTTACTATTCTTTTTGTCATAAATCAATATCAAAGGCAAATGTGTATCTACCTAATGCTACAAAATATGTAAGGTTCACTGATGGAAAACTAGGCTGTTAATAAGATTTGATGTCTGTTCAAACAATCTGCTAATTGATCGGCTTTTCTAACTTCCCTCTGATTGTGACATCTCTGTTAGTGTACAATATTATTATGTATGTGATTGACCACGGAAAAGTTTACATATTTATAGGTTAATGACCTTGTTGTTATAATTATATTTGATAGGGATTGGATATATATTGGATCCAGATTTTTCCTTTGTGAAAGTTGCCGCACCTTATGCACAGGTTAGAATTATTGTCCATCCTTTTATTGTCCCTATATCTGTATTGTGTATTTGGGAAGTGCATTGATACAACTATTTTAGAAAAGTTAGTGTATGTCAAAATAAAGTAACTAATAATTCGAATCATACACGCTTCTTTGTTATTTTTGCTGAGACAATTTTCTTTCTTTCCTTTATCTTAGCAGCGTAGTCACTATCTTCAGACTTTGCCTGTGCATGCAATGCTAATGAATAATTTATTTTGAACTTCAGGAACTTCTAGACTTGAAACAGAGACGAACAAGTGCACCTGAACTAGTCCGGGAGATAAGAAAGCAAGCAAACAGTGTAAGGACACAAATATTTTTCTAGTATTCCAGTAGATGTGCATTTTTTCCCTTTTGATCTGCATATTGTGACAATGGCACATCATACTGATCAATGTTCTGCTGGGTGTACATGACAGGCTCGTGACTCTACCATCTCAATGCCCTACAGAATACAGCGAATTGAGGATTTTGTTGGGCAACTTGAGTCCGGTGATCTGAAACTTAGAGTCAGAGTACTCGAGGTAAGATTATTCTGGTAACAAGTTCTTTTACTATCTAGCATCTTGTTAAGGTTGTTGGAGATTGATAGGAATAAAAAAAACAATCTGCTTTACACATTTTTGCATTATGTTAATGAATGATTTTAAGCACTAAACCGTCTGTCATACATAAATATTCAATACTTTTAATTAAAAGAATATGCAAGTATTATTCTTGATGGACAGAGAATAACTACAAAATTATTCTTTTTTTAATCCCATACCGATATTTACCAAAAGCTCGTCCATTCGCTTGTTTAGCATCACTACCTGCAATTATCAGAAAACTAGTGCTTCTTTTTTGGCTCTGTCCTGAATCTGAAAACATGCTGAACTTAATGCCATTTTCAGTCTGAAAGAGCTGCTCGTAAGGCGAATGTACTTCAAATGGCGACCATGTATACAGCCATTGGTGGCACGCTGTTGAACGTTGGGGTCACATTGAGTAGCCAAGGGAACCAAATAGTCGCAAACGGGTCTTTTGTTGGCGCAGGTGGGGTTCTCTTTTTTGTTTGGTGAACTTTGTTTCATACATTCTCCATATCATTGCGGACGATTCAGTCTTTTGTTAGTCTTTGTTACTTCTTATGTGATATATTACTAGAACATCGAGGTTGATCCTTTTGATCCGAAAATGTCCAACTTGATCAAGCTACTTCATGCAGGCTCTAAGGATGTGAAAAAAAAAAGTACATGTTCTTGATTCGGTCTAATTGCTGTTCCCAACTGAAACCATGCAGGCATATTCTTGGCATTGCTCATAAGATCTATGCAGAGAGTGAAGAAACTCGACAAATTCGAGACAATGATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030361