Os10g0553900

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0553900| Description = Protein of unknown function DUF863, plant family protein| Version = NM_001071871.1 GI:115483337 GeneID:4349337| Leng...")
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Gene Name

Os10g0553900

Description

Protein of unknown function DUF863, plant family protein

Version

NM_001071871.1 GI:115483337 GeneID:4349337

Length

5642 bp

Definition

Oryza sativa Japonica Group Os10g0553900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22186435..22192076

Sequence Coding Region

22186868..22187213,22190386..22191812

Expression

GEO Profiles:Os10g0553900

Genome Context

<gbrowseImage1> name=NC_008403:22186435..22192076 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22186435..22192076 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcacgttaggtccgggctgggaagcccagatgcttccagcaattctagtaagcggaagaggggctcctgcttcgcggagcggaatatggatggtaggaattcgatccggataaagcccgacgtcagcgtcagagcgcgggagaaatgcggcgggggtggcgggcatcgctacgtgatcgatttggagaagccggcgacgtccgacgatgatgtggagtttgtttcttatgccgggtttggcaaccggtctcaggaccgctgctatgcttcggcggagaattgctcgaccgcggtatccagtcagctctgtgtggagcggaatgcttcgcgtgtaagccctggttcagttggttcgagtgatactctggactgccagtcacctatcaagcctgataattcagaatccaggcatttgctgatcgacctgaatgtacctcaagaagaaagtctacatgttttctatgctccatctcaaataacttgtccaactttagttaattcttcgtcatcacaccctggagaattttggaatggctccagcaatgtttacaaaaaggaatgtggttctggtgttggatcatcaaaaggatcttccattacggtggttgcacccagctctgctcctgatagttcgagggaagttgtggctgcataccaatttcatgatcctaagaatttgcatggtaatatacatgcaagagaaaacagccagcatgaacatgcagtggataagttatgtggatcaagcagtcaatatttcttgccacagcaaagattttctgtcagttcctgtggcagaaatgactcatctttggccttacaaaaatcaggtgacaaccatgttgcctgccaatcaggacaaccacctctggctgtgcatactgagctccaacatgacacttctattgtaatatccagtggtgaagagaaggtcctttttgaccttaatgtgccagctgaaagcattgacatggaatcaacaataaccagtaatagttttagagataagctagtgaaaaatgatggaagtgaagaaacagtaaccgatcattctttctccaagagaaacggtgtgcatgctgaaacttctatagaagaacgaactgttggagaacatcatatatcagtcagcaaggatggaaacaccacatttttccaagaatcaataaataatgaaattgataaggcgcagtcttcagaccttataagtgttagcagcaaacatttgattgcagaaactcctcatgttgacaatattgtgtgtccagaactgcgagcatctcctgatggagcatcaagtcctcaagagaccttgataggcaattgtgacaaaatggtttgtattgcagctgagacactcgtttccattttctcaagttctgcatgtactacagattgcccaggaactgacagtcagacagcagctgaggatgtaaacgatgaaccgcagcactctttggattcctatgaggaaattgtattgaatgtagaagagatcagagatgacggggaatccatccctgtgattccacctgataaggatggaccgtcttgtgggatcaagctaagaagaggaagaggactgagaaattttctgagggagataatgcctagacttgtttctctttcacggcatgagatatgcgatgatttgcatgctataggttacgagccccggaaaactcgatctaggaaaacttttggggctcaaggttcatcttcaactagaggaaggccgcccaaacatcgtcccactgccaggaaatga</cdnaseq>

Protein Sequence

<aaseq>MHHVRSGLGSPDASSNSSKRKRGSCFAERNMDGRNSIRIKPDVS VRAREKCGGGGGHRYVIDLEKPATSDDDVEFVSYAGFGNRSQDRCYASAENCSTAVSS QLCVERNASRVSPGSVGSSDTLDCQSPIKPDNSESRHLLIDLNVPQEESLHVFYAPSQ ITCPTLVNSSSSHPGEFWNGSSNVYKKECGSGVGSSKGSSITVVAPSSAPDSSREVVA AYQFHDPKNLHGNIHARENSQHEHAVDKLCGSSSQYFLPQQRFSVSSCGRNDSSLALQ KSGDNHVACQSGQPPLAVHTELQHDTSIVISSGEEKVLFDLNVPAESIDMESTITSNS FRDKLVKNDGSEETVTDHSFSKRNGVHAETSIEERTVGEHHISVSKDGNTTFFQESIN NEIDKAQSSDLISVSSKHLIAETPHVDNIVCPELRASPDGASSPQETLIGNCDKMVCI AAETLVSIFSSSACTTDCPGTDSQTAAEDVNDEPQHSLDSYEEIVLNVEEIRDDGESI PVIPPDKDGPSCGIKLRRGRGLRNFLREIMPRLVSLSRHEICDDLHAIGYEPRKTRSR KTFGAQGSSSTRGRPPKHRPTARK</aaseq>

Gene Sequence

<dnaseqindica>434..779#3952..5378#gcgtatctcccccctttccctcggcgtaaaagaaaatctcccggtctctcgtctcctccgctccttgcgccatctcgccgccgatctccatcgggcgagcagagcagagcaggggatcctggtgagcatccatccgcatcctctttccgattcatctctcactcccatcgggagtgccttttgtctcgaattaaccctagtttcttctcttctagatctggaagaagctccttctcttaatttcagagccttaaaaccttaatacgagtaacagtttgttgtttgttcatccaaaagtttggggttgaactgaatccccatgccctcacctggtactaatagcagcagcagcttctgtttaggaggaggctaggaaaaaaaaaaggaggattttttttttgtttttttgcgggggttcagctgaacaacccccatgcatcacgttaggtccgggctgggaagcccagatgcttccagcaattctagtaagcggaagaggggctcctgcttcgcggagcggaatatggatggtaggaattcgatccggataaagcccgacgtcagcgtcagagcgcgggagaaatgcggcgggggtggcgggcatcgctacgtgatcgatttggagaagccggcgacgtccgacgatgatgtggagtttgtttcttatgccgggtttggcaaccggtctcaggaccgctgctatgcttcggcggagaattgctcgaccgcggtatccagtcagctctgtgtggagcggaatgcttcgcgtgtaagccctggtgagttctgaatttgctcctcctcctcctcctcttgtttattatatagttagtaaatgtagtgtcttgtgcagcttctgagtgtttatgtttaattgtttggataattcgtagtggaaatatactgcttgggtatttcacaaatgcgcttgttagttacacatatctgatcttcttattctagtacagcctatttactgtatatgactgtccactggtattaaatgtatgcgcttctcacttgtgctttgatggaaaatatactcaaagatcatagcatttagattaatgcttgcttgacaaagcgggtgctactattgtattggtgttcattattgacgcggagatacatggtgtagtgtaaattgctacaaattgatgatgcatttgctagatattggtagaatcagtgatctctacttggtgttatggcttctccttttccctcgaacagagctttataaactacataacagtattaggaatgcaatgctcaagtgtatggttaacaaataccacagcctgattatgccaaacaaagcaatggactatgttaacagtctgatcaatttcatgagctaccttgttccatcaacaccatcatctcttgcaggggcggagccagcattttgagtcactggggtcatggcttttacttttatttatgtcgtgtttgaaactatatttattctcgaagctagatatttttagctcaaaattcttttggagctagagctatgagtaagttgggattgttccattttgctaaaaataaatgtttaaagtctattctataagaatttctgaggtttttaaggtctaaaaatttaaaagttatgaccatatacaatcgggcataacaaccatgtgctttttcagacatacaaatatgttctgaaagttgtttattattccatctgtctcaaaatacaactacctacgtctctttaagagatcaatgttagggtgtgaaataattgtgattggttggaaaaaaagtaggtgaaaaaaattatatcggggaatattgtgattggagatgggatggttcatagaaaatagctatattttaaagcaaatttgaatattgagtaaattgcacttacggtgcaacaacttggcaggtgggtgtaatttggtgcaataacttgaaaaatgaccgttctagtgcaacaacttggtaggaatgtgcaatttagtataagaactttataagtgatcgtataaatgcaacaacttgtaaggtaggtaggattttgctacaataaattaagaagttatgtgacaacttaattatttagagcattttttatataaattcaaatttttaagtacttattttgacaatatactagcatggatttatataaatatatttatatttttatcctaataactaataactgaaagtcaattaaactggattaagaaattattatatttcagttgataattgagaaggtgaagaaaacaaaaaattcttaaaggtaattggatgtaaattgtatatgcaacataattcttaaagattaaattcatatataaggtaatatccgtatgatcagtgtgtattggcatactgacatcgtgaaaaatctcatctagcatatgcttagctaaattgattcaataaaatactaaattattaagttcttgtactagaacgcacccacttgtcaagttgttgcactcggacgtttaattctaaagttcttgcactatattgcacccacctgctaagttgttgtatcgtgggtgcaatttactcttgaatcttagaagtaacatattttgagacagagtgagtagcttaaaaaaacacatctagtagttgattagcaaaacttcaggcctaatgcattgatatacatagcacatagctaaaataagtagttggttaatagatcaaatatgtctaattgcagcattagtagcggattgacagtagcataacacagctaacaaattatgattccaaagaaagaaactgtacaattgtttcagctttcctgagctccagcagtttatccggctggccggggtcattaagcttttgctactggggtcattagctagaaaataatgaacaattcacttgatagatcgaatgccatcggggtctaatgaccccaatgatagtactgcagctccgcccctgatctcttgcagaatgaaattccatcttgatcagtcatcttgtctagtattcaacactgctacaatatatgcacttacaaccaacctgtgatttgtacaccaattcaccaaaagaatctaaaataggcatatgtgaaaaaggttctgtgatcaaatatatgtgcatcgcacaaaaaggacaagttgtagatgcatcttttgtgatataactttctttgtttttgcagagcacataggatctttttctctcttatgattatttacaggtgcacatgttcaaacatactgggcatcatttttttaataatactgacaacataataataggtgttcatcaagtgttatctacttgtagaaactttgacaattatgctcacataatgggtgcatataaacttgagtttgtaaggttgcagttttttttttaaaaaaaaatcacagatatgcaagtcatgccttttttagctcctaatagcttaagctcatttcttttgtaataaagttgtgttgcatgtcagctccactggacctataataatttgaaatttggtttatgataaaccaagaatagggatgacatatcttttaagcaatcatgcaggagactctctattaaacttaacaaaagagaggtaacttgcaagaaaccaaaatgtggttttaaggtttcaaaaaagaaggcagactgtgatgttgtcaagatggtttacggcgaggcatttctctgctctagtacttctgaatacatctgtgccctaactaaatttccacaacttattcatgtgggagaggatgctctcttcagcatcattgatgatttggacctttagtgccactaattgttgcaaatttgacatggccataaacaacatgtggttgttggaaacaatttacttgttttattcttctgatggacgtctgctgtatgggtttcttcactgaaatctctagtaatcctacaactttacctggtcatcgagcattcatataactgttcaaccctgatggttttcaggttcagttggttcgagtgatactctggactgccagtcacctatcaagcctgataattcagaatccaggcatttgctgatcgacctgaatgtacctcaagaagaaagtctacatgttttctatgctccatctcaaataacttgtccaactttagttaattcttcgtcatcacaccctggagaattttggaatggctccagcaatgtttacaaaaaggaatgtggttctggtgttggatcatcaaaaggatcttccattacggtggttgcacccagctctgctcctgatagttcgagggaagttgtggctgcataccaatttcatgatcctaagaatttgcatggtaatatacatgcaagagaaaacagccagcatgaacatgcagtggataagttatgtggatcaagcagtcaatatttcttgccacagcaaagattttctgtcagttcctgtggcagaaatgactcatctttggccttacaaaaatcaggtgacaaccatgttgcctgccaatcaggacaaccacctctggctgtgcatactgagctccaacatgacacttctattgtaatatccagtggtgaagagaaggtcctttttgaccttaatgtgccagctgaaagcattgacatggaatcaacaataaccagtaatagttttagagataagctagtgaaaaatgatggaagtgaagaaacagtaaccgatcattctttctccaagagaaacggtgtgcatgctgaaacttctatagaagaacgaactgttggagaacatcatatatcagtcagcaaggatggaaacaccacatttttccaagaatcaataaataatgaaattgataaggcgcagtcttcagaccttataagtgttagcagcaaacatttgattgcagaaactcctcatgttgacaatattgtgtgtccagaactgcgagcatctcctgatggagcatcaagtcctcaagagaccttgataggcaattgtgacaaaatggtttgtattgcagctgagacactcgtttccattttctcaagttctgcatgtactacagattgcccaggaactgacagtcagacagcagctgaggatgtaaacgatgaaccgcagcactctttggattcctatgaggaaattgtattgaatgtagaagagatcagagatgacggggaatccatccctgtgattccacctgataaggatggaccgtcttgtgggatcaagctaagaagaggaagaggactgagaaattttctgagggagataatgcctagacttgtttctctttcacggcatgagatatgcgatgatttgcatgctataggttacgagccccggaaaactcgatctaggaaaacttttggggctcaaggttcatcttcaactagaggaaggccgcccaaacatcgtcccactgccaggaaatgatcaacagcatttcaagttcatactaggatgccacgagacgagcaattcagaagatgaaatataattttaaccttgtgaatattcatgtgtgttgtgcgcatcttcaaactcggtttgttactagtcactaaattgaggatattttctttattccttttacctcttgggagtgctgtgggccgttagcttcaaatttgagttcagcattggcaatgaaggcatagtcataccattataaaatctcagaattttgatcttttaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0553900, RefSeq:Os10g0553900