BGIOSGA030415

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Revision as of 09:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030415| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030415, complete gene.| tag = P0701E0...")
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Gene Name

BGIOSGA030415

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030415, complete gene.

LocusTag

P0701E06.10

Ensembl Transcript ID

BGIOSGA030415-TA

Ensembl Protein ID

BGIOSGA030415-PA

Length

2987

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5223000..5225986

Sequence Coding Region

5223000..5223237,5223695..5223804,5223882..5223937,5224047..5224131,5224200..5224247
,5224372..5224446,5224543..5224654,5225088..5225139,5225217..5225268
,5225369..5225426,5225666..5225764,5225856..5225986

Genome Context

<gbrowseImage1> name=IndicaChromosome09:5223000..5225986 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:5223000..5225986 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCATCAGTGACTACTGGCTTGCAGATGGCGGCGGCACGCCCTTGTATCCCAGCTTGCCAACGCCTGCTAGGGTCAAGAGCAGCACTTCCTTCATTTGCAAGGGCGCTTAGTACCCAAACTGGCTTCGCAAGCTGCAGAAAAACAGCATCAGCAGGGCCGTTTGTTTCTCTGAACCACAAGAGGTTTGCCGTGAGGGCGATGTCTGCCCAGGGACTCCCCATTGATCTCAGAGGTAAAAGAGCATTTATTGCTGGAGTTGCTGATGATAATGGCTACGGCTGGGCAATAGCAAAAGCTCTTGCTGCAGCTGGTGCCGAGATTCTTGTTGGTACATGGGTGCCTGCACTGAACATATTTGAGACAAGCTTGAGGCGCGGGAAGTTTGATGAATCACGAAAGCTTCCTGATGGATCTCTTATGGAGATTACAAAAGTCTACCCATTGGATGCAGTTTTTGACTCTCCTGAGGATGTTCCTGATGATGTTAAAGCAAACAAAAGGTATGCTGGATCTTCAAACTGGACTGTTAAGGAAGTTGCTGAAACTGTGAAGAATGACTTTGGTACCATTGACATCCTTGTACACTCTCTTGCGAATGGTCCTGAGGTTAAAAACTCTTTGCTGGAGACATCAAGAAAAGGGTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAGCACTTCCTTCCTATAATGAATCCAGGGGGTGCTACTATATCCTTAACCTACATAGCTTCTGAGAGGACAATTCCTGGATACGGTGGCGGCATGAGCTCAGCAAAAGCAGCACTTGAGAGTGATACAAGAGTTCTGGCTTACGAAGCAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTCCATTGGGAAGTCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTACTCGTACGTGAACGCACCACTGCAGAAGGAACTCTTGGCAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATCGCCGTTGGCATCTGCAATCACTGGATCAACCATCTATGTTGACAATGGGCTCAATACAATGGGACTTGCACTTGACAGCCCTACACTATCCACATAG</cdnaseq>

Protein Sequence

<aaseq>MGASVTTGLQMAAARPCIPACQRLLGSRAALPSFARALSTQTGFASCRKTASAGPFVSLNHKRFAVRAMSAQGLPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDSPEDVPDDVKANKRYAGSSNWTVKEVAETVKNDFGTIDILVHSLANGPEVKNSLLETSRKGYLAAVSASSYSFISLLQHFLPIMNPGGATISLTYIASERTIPGYGGGMSSAKAALESDTRVLAYEAGRKGKIRVNTISAGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLASPLASAITGSTIYVDNGLNTMGLALDSPTLST</aaseq>

Gene Sequence

<dnaseqindica>1..238#696..805#883..938#1048..1132#1201..1248#1373..1447#1544..1655#2089..2140#2218..2269#2370..2427#2667..2765#2857..2987#ATGGGCGCATCAGTGACTACTGGCTTGCAGATGGCGGCGGCACGCCCTTGTATCCCAGCTTGCCAACGCCTGCTAGGGTCAAGAGCAGCACTTCCTTCATTTGCAAGGGCGCTTAGTACCCAAACTGGCTTCGCAAGCTGCAGAAAAACAGCATCAGCAGGGCCGTTTGTTTCTCTGAACCACAAGAGGTTTGCCGTGAGGGCGATGTCTGCCCAGGGACTCCCCATTGATCTCAGAGGTAAGCTTTATGCCTCTCAGTTAAAACTCAACAAAAAAAAAAGTTCTTTAACTCGATTTTGGAGCTATGATATCTAGACAAGATTTTGAATGGTGTTTATTTTCGTCACTCATCATGGCTAAAAACATTTTAGTGGTCACTAATTTCTGTTAGTGCTGTATTTTAGTATGTTAATGGGCTTCTAAGATGTATGCCATAAAATGGACTACCTTGATGCATTATTGAATCATCTGTTAAGTCTGTTAATAATTATCTGTAAAATTTTTACTAGTATTAAACATGAGTGAACATGGTTAACTCTTTTGGTATTGCCCTTCTATATATGAGTGACGCATGAGGACTCCTCACACACATAAAAAGTGCTACTAACTTGTTATTACTGAAGGAAATGTATAATGTAGCACAACCCAAAAGATATTCAATTATGAAGTCTCTAACTTGTTGCATTTTTTTACAGGTAAAAGAGCATTTATTGCTGGAGTTGCTGATGATAATGGCTACGGCTGGGCAATAGCAAAAGCTCTTGCTGCAGCTGGTGCCGAGATTCTTGTTGGTACATGGGTGCCTGTAAGTTGATCTCATTCACGAAGTGTGTCATTATAGATGTTCTGGTGAAAACACTCAAGTGTCATTCTCATCTTCAGGCACTGAACATATTTGAGACAAGCTTGAGGCGCGGGAAGTTTGATGAATCACGAAAGTGCGTTCTTAAGTGTACTTGCAGTTATTTAATGTTTTATGTAGTCCATTTCAGTGTCCCATGCTGGAATGATTATCATCTCCATGGTGTCTGACTACCTTTGTTGCAGGCTTCCTGATGGATCTCTTATGGAGATTACAAAAGTCTACCCATTGGATGCAGTTTTTGACTCTCCTGAGGATGTTCCTGATGATGTAATGTTCATCATTTTCTTTTTCATGTCAACTCCTGTTCTGCATTCTGAATCGGTCGTCTCGTGTAGGTTAAAGCAAACAAAAGGTATGCTGGATCTTCAAACTGGACTGTTAAGGTAAGCTGCAGTATGCCTTTTTTGCCATATTACTTGGAAATAGATACTTGTGAACCATGAGGATTACTAATTTGTACGATCCTCCCAAGTTCCAACCCAAGGCCTAATTTGTCTAAATTCATAGGAAGTTGCTGAAACTGTGAAGAATGACTTTGGTACCATTGACATCCTTGTACACTCTCTTGCGAATGGTCCTGAGGTATGCCACTATCTTTTTTCTTTCTTTATCTCATTGTCATCATCTGGTTATCCTCATCAGCACTAGCATCTAATTTTTCTTATTTTCTGCTCAAAGGTTAAAAACTCTTTGCTGGAGACATCAAGAAAAGGGTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAGCACTTCCTTCCTATAATGAATCCAGGTATCAAACAATCTTTGCTAGTGCTCTGTAACTATTATTATTTTCTGTTTTTGTTCAGGTGTGGATTTTTTAAAAACCATGCTAATTTTTCACACCACCAGTTGTATTGTATAACAGTACTTATTTAATGACAACACATTGGTGTGCAAGTGTTGGGCCTTGGCTTTATCCAAGAAATTACTAGCTGCCAGTCCTTAATATCGTCAGATGGAAAATAATTAGCGTACTGCTGGTTATTAACTCCTGGCTATTAACTTGTTTGCCATGTGCTTAGGTGTGGAAACTGTGACTGGCAATCAAACAAGCCTTATGGGCCTTTCTCATGTTTCATAGATTATTTTGTTGTATTTATTTAGGTCAGAATCTAGTTGTTCTAGTTCAAAAGTCATTGCCATTTCAGCACTGCTTCACGGGACATGTCACTGATTTGCAGGGGGTGCTACTATATCCTTAACCTACATAGCTTCTGAGAGGACAATTCCTGGGTGAATACTCTCTCAATGTTTATCACTTCTAAATTGTGAGTATTATTACTTATGTTTTGTTTTTATTGCTTTTCTAGATACGGTGGCGGCATGAGCTCAGCAAAAGCAGCACTTGAGAGTGATACAAGAGTATGAACTTCTGTGTGAAGTCGTGCATATTTTTTATTAAGATCCCAAATAATGCTTGGTTTGCAAATATTTACTTCTGGCCATTCTCTTATCCTTGTAGGTTCTGGCTTACGAAGCAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTATCTTACAGGAATTAATCTTCTTTTCATAAGAATAAAGTCTCATAGAAATTAACCATTTATGCGTCATTCAGGCAGCAATAAGTTCAATCCCAGATGTGTATAATCCTTTTATATGATAATACAATTTCATTTGCACTTGAATCCTACATGCTATTTCATTATTCAATGTATGGGTTTTGAGGACATCTGTTGTAAACTACTTGGTGACATTACATGCCCATATCCTGTTTCTGCAGGTCCATTGGGAAGTCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTACTCGTACGTGAACGCACCACTGCAGAAGGAACTCTTGGCAGGTCGAAATTACCTTCTTTCAGTTTGCCTCTATTGGGATGCCTATTTATCCACCGAAGGTCACTTATAAAGCTTTATTTATATGTTCAACAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATCGCCGTTGGCATCTGCAATCACTGGATCAACCATCTATGTTGACAATGGGCTCAATACAATGGGACTTGCACTTGACAGCCCTACACTATCCACATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030415