BGIOSGA030431

From RiceWiki
Revision as of 09:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030431| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030431, complete gene.| tag = P0645D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030431

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030431, complete gene.

LocusTag

P0645D04.21

Ensembl Transcript ID

BGIOSGA030431-TA

Ensembl Protein ID

BGIOSGA030431-PA

Length

3221

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5501947..5505167

Sequence Coding Region

5501947..5502352,5503052..5503178,5503335..5503441,5503526..5503669,5504042..5504164
,5504263..5504445,5504884..5505062,5505141..5505167

Genome Context

<gbrowseImage1> name=IndicaChromosome09:5501947..5505167 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:5501947..5505167 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACAAGGGGCTCTTCGCCAACGACGGCTCCTTCATGGAGCGGTTCAAGCAGATGCAGGAGAAGGAGAAGGAGAAGGCCGCCGCCGCCTCGCCGTCCGCCGCCGCCGCGGCCAAGGCCACCAACCCCAAGCCGGTTGTCGTCGCCGCCAACACCCCGTCGGCGAGCAAGAGGCCGCTGGAGCTCAAGGGGGGCGAGGTGAAGAAGGCCGGTTCGATCTCGTCGGGCGCCAAGCTCGCCTTTAGCCTCAAGAAGAATAAGGTCGCCGTGGCGCCAGTCAAGTTTGCGGCTGACGATGAGGATGAGGAAGATGTTGGTGCGGACAGGGAGGAGCCTGTGAAGCGGCAGAAGTATGCGCAACCTGAAGCTCCTGCATCGGTGGCTGCCCTGTCAGGGGTCGTTGCCCCATCACCACCAAATGATATGACTGTGAAGCAAGTTGCTGACAAATTAGCAAATTTTGTTGCCAAAAATGGGAGACAGTTTGAGAATGTCACGCGGCAAAGGAATCCTGGAGATACACCATTCAAGTTTCTGTTTGATAAGAACTGTTCAGACTACAAATACTATGAGTTTCGGCTTGCTGAAGAAGAAATGTTACTTGCTCAGTCAAAGGAGGCCCAGGCATCAAAACATGCTAGCTCAAGCACTCCAAGCTCCAGAGCACCAAGTGCCCCACAGAGAAGCTCATTTGAACAAAAGACTAATTATCAAACACCTGCTTCAGCTTTGTATGGGGCATATGAGGGTAGTTCTTCCCAAGGAAGCTCATCTGGCTATGGTGAGCCTCCCAAGGATCCAGTAGCATTGATGGAATTCTACATGAAGAAAGCTGCACAGGAAGAACGGAAAAGGCCACCGAAACAATCAAAAGATGAAATGCCACCACCTCCTTCTCTTCAAGCTCCTTCTTCCAAGAAGGGACATCACATGGGCGACTTCATTCCTCAAGAAGAACTTGAAAAGTTTATGGCACGTTGTAACGATGCTGCTGCACAAAAAGCTACCAAAGAAGCTGCAGAGAAGGCTAAGATTCAGGCTGACAATATCGGACACAAACTTCTGTCTAAGATGGGATGGAGGGAAGGTGAGGGTCTTGGCAGTGAGAGAAGTGGACGTGCAGATCCCATTATGGCTGGAGACGTGAAGAAGGACCATCTTGGTGTTGGCGCTGTCCAACCTGGTGAGGTCACATCTGAAGATGATATCTATGAGCAATACAAGAAGCGAATGATGCTTGGCTACCGTTATAGGCCAAACCCACTGAACAATCCAAGGAAAGCATACTACTGA</cdnaseq>

Protein Sequence

<aaseq>MADKGLFANDGSFMERFKQMQEKEKEKAAAASPSAAAAAKATNPKPVVVAANTPSASKRPLELKGGEVKKAGSISSGAKLAFSLKKNKVAVAPVKFAADDEDEEDVGADREEPVKRQKYAQPEAPASVAALSGVVAPSPPNDMTVKQVADKLANFVAKNGRQFENVTRQRNPGDTPFKFLFDKNCSDYKYYEFRLAEEEMLLAQSKEAQASKHASSSTPSSRAPSAPQRSSFEQKTNYQTPASALYGAYEGSSSQGSSSGYGEPPKDPVALMEFYMKKAAQEERKRPPKQSKDEMPPPPSLQAPSSKKGHHMGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSERSGRADPIMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY</aaseq>

Gene Sequence

<dnaseqindica>1..406#1106..1232#1389..1495#1580..1723#2096..2218#2317..2499#2938..3116#3195..3221#ATGGCCGACAAGGGGCTCTTCGCCAACGACGGCTCCTTCATGGAGCGGTTCAAGCAGATGCAGGAGAAGGAGAAGGAGAAGGCCGCCGCCGCCTCGCCGTCCGCCGCCGCCGCGGCCAAGGCCACCAACCCCAAGCCGGTTGTCGTCGCCGCCAACACCCCGTCGGCGAGCAAGAGGCCGCTGGAGCTCAAGGGGGGCGAGGTGAAGAAGGCCGGTTCGATCTCGTCGGGCGCCAAGCTCGCCTTTAGCCTCAAGAAGAATAAGGTCGCCGTGGCGCCAGTCAAGTTTGCGGCTGACGATGAGGATGAGGAAGATGTTGGTGCGGACAGGGAGGAGCCTGTGAAGCGGCAGAAGTATGCGCAACCTGAAGCTCCTGCATCGGTGGCTGCCCTGTCAGGGGTCGTTGGTAATCATTTATTCACATTTGTTCCTGTAATCGCATTCTTTTCCTGTGACATAGTATCAAATACTTTTGTTATATGTTTGTTGGTTACTATGGGTTATATTATAGTCCATCTCCAACTGGATTGGAACTTTGGATTTAATCATTGGATGTATTTTGATTATAATGAAAGCACAATCGAAATAGTAGGTATTCATCATTATTCAGTATAGCTTCTGTCCATGGTTTAGATTAGCTCATTGAATTTGTTGCAGTCTTTATACAAGCATTTGATATGTCGTAGGTTTCTGATAAACTGCTGAACATGTAACCGGTGATACTACATAAGTATCCCTTGAGCTGCTGACTGACTGACATGGTCTGCCTATTGTAAAGCTCTCAAGCTCTTATACCAGGACAATTTACTGTTAAACCAAGGAGCTGTGGACATAATATATATGATTCATGCATATATGATATACTGTTTAGGTTGTCAAAAATAACATCTGTTCCCAGCATATGAAATTACTTGAACTGGTATTGGAAACAGAAATTTGTGAAGGTTTTGGTTTTTTTTCTTCTGACTGCAGCTTATAGATTAACTGTATCGACATTGATGGGAAGGATGTTGATTGAAAGAGTTGGATGCATTACTGCTACAGCAGTAATTTGCATTCCTTGTTCATGCGCTTGATATTAATCAGTTATTTAAGTGACATGCAGCCCCATCACCACCAAATGATATGACTGTGAAGCAAGTTGCTGACAAATTAGCAAATTTTGTTGCCAAAAATGGGAGACAGTTTGAGAATGTCACGCGGCAAAGGAATCCTGGAGATACACCATTCAAGTATGCAGGCTAAACTGTTCTGATCGCGTTATCACTATTCTATTCTATGAATTTAATTTTAGAAAATAATTTATAGATAAATGTATTTGAGTTTTGACTTTCAGCTTGTAAGACTAGCTGCACCATTGTGTTAATACAATTCTTTGTGATTTTCAGGTTTCTGTTTGATAAGAACTGTTCAGACTACAAATACTATGAGTTTCGGCTTGCTGAAGAAGAAATGTTACTTGCTCAGTCAAAGGAGGCCCAGGCATCAAAACATGGTTTGTGACACAAAAGTTCTGTGGTTTTTGGTTTAATTCGGCTTCAGTGCAAGTAATCAAATTACATGCCCTTGTCAAATTCAGCTAGCTCAAGCACTCCAAGCTCCAGAGCACCAAGTGCCCCACAGAGAAGCTCATTTGAACAAAAGACTAATTATCAAACACCTGCTTCAGCTTTGTATGGGGCATATGAGGGTAGTTCTTCCCAAGGAAGCTCATCTGGCTATGGTAAATTATATTCGTTGTTTCCTTGTTTTTTATTGTCTTGTGGCTGAGTGTTCAATTACATTACCTGTGTTTCTATACTGTGTTCTGGTTATCAAACTTTTATGCCCAATGTAAGTTTGCCGCTTCAATTGTTATTGTTACTTCTAATTTCTTTTTTGCTACAACTATGTTGCACGGCCTGTTTTATATAGTTGGGGTGTACTGCAACAAACAGAACCAACACGAGTTTCTTTTTTTCATGCTTCAAACTGTATTGGCTGTTCTATTTCCAACTTTTAGTTTCCCTCAGAAGTTGATATTTCCAACTTGATATATTTGATCTTTTCATCTTAATTTTTTTTATGTGCTCAGTGTTGTTTTATTTTTTTGCAGGTGAGCCTCCCAAGGATCCAGTAGCATTGATGGAATTCTACATGAAGAAAGCTGCACAGGAAGAACGGAAAAGGCCACCGAAACAATCAAAAGATGAAATGCCACCACCTCCTTCTCTTCAAGGTACCCTTCTTTTATAGTATTTGTTTGTCTGTATTCAAGGGTTGGGGAAACCGGAGACCTCATATTTGTTTCCTTTCTATCTGGTCTGTGTTTTGCAGCTCCTTCTTCCAAGAAGGGACATCACATGGGCGACTTCATTCCTCAAGAAGAACTTGAAAAGTTTATGGCACGTTGTAACGATGCTGCTGCACAAAAAGCTACCAAAGAAGCTGCAGAGAAGGCTAAGATTCAGGCTGACAATATCGGACACAAACTTCTGTCTAAGATGGGATGGAGGGAAGGTTAGTCCTTGAATATTTGAATTATCATTTGGATCTTACTTTGTTCCTCTTGGATTTCCCTTTAATCAGTACGAAATCCAAATCAACCCCCCAGCAAAGAAATCAATTGGGTGTCTGGTAGTGGTAGACTGTAAATTTCATTTCAAATCCTATCTGAACTCTGGTATTCATTCTTGATTCTGTGCTGTCTCTTGCTGGTTGCTGCCCATCTCCTCCTGTCTATCGCCATATCCTGTTTCCTGTGTTCTTCCAGCAAATATTTGTTGCTGTACAGTTCTGTCGCAAATTAGCCACCTCTACCCACAGACACCATGCTAAAAATTGTGATAAGAATTTATCATTAATGATTAACAGAACGCAACTGTTGCTGGTGTTTCCTGTTTTCTCAAGGTTATGTTTTATACATCAGATTTTGAGATGCTAAGTTGTCTTGTGCAGGTGAGGGTCTTGGCAGTGAGAGAAGTGGACGTGCAGATCCCATTATGGCTGGAGACGTGAAGAAGGACCATCTTGGTGTTGGCGCTGTCCAACCTGGTGAGGTCACATCTGAAGATGATATCTATGAGCAATACAAGAAGCGAATGATGCTTGGCTACCGTTATAGGCCAAACCCACTGGTATGTTGTCTGCCATAAGCTGTGTAAATGAGTGGTTTGGTCATCCCTGTTCACCTAATGATCATCTCACTTTTACAGAACAATCCAAGGAAAGCATACTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030431