BGIOSGA030457

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Revision as of 09:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030457| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030457, complete gene.| tag = OS08G01...")
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Gene Name

BGIOSGA030457

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030457, complete gene.

LocusTag

OS08G0125300

Ensembl Transcript ID

BGIOSGA030457-TA

Ensembl Protein ID

BGIOSGA030457-PA

Length

4284

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6287132..6291415

Sequence Coding Region

6287132..6291415

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6287132..6291415 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6287132..6291415 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTGGTTCCGGCGGGAGCCGCAGCGGATCCGGCGAGGGGGAGCTCAGGGAGTGCGTTCTCCTACCCACAACTCACGGCGACGAATTACACCAGCTGGTGCATTCGCGTTCAGGCAATGATGGAGGACCAGGGCGTGTGGGACGCCATCGAGCCGGCGGCCGGGGTGGCCGTCGACCCAAGAAGGGACAAGAAGGCGAAGTCCCATCTGCTGCAGTCCCTCCCGGAGGACTTGCTGATGCAGGTGGCAAAGAAGAGATCGGCAAAGGAAGTGTGGGATTGCTTGAAGACAAGGTTCGTGGGCGCGGACCGCGTTCGCGAAGCGCGCCTGCAGACGTTGAAGGGTGAATTTGGTGCCATGGTGATGGAGCCGGGGGAAACTCTGGATCAGTACGCGGGCCGCATCACCGCGATGAGCGTGCGTCACTCGGCGTTGGGCTCGACACTGAGTGATTCCGCGATGGTGAAGAAGCTGTTCGACACGGTGCCAGAGAAATTCATCAGCCTCGTCGCAGGTATTGAGCAGTTTTATGAGATTGATAATATGCCATTTGAGGAGGCGGTGGGTCGTCTCAAGGCCTACGAAGAACGAGTTCGCAAGAAGAAGGCGGCCGCTGGTGGTGTCACCGCCGACGGTCAAGTACTTCTCACTCAGGCGGAGTGGGAGGCGCGTTTCAGGAAGGACGGCAGCGAGTCGTCTTCGCCGCAGAAAAACAAACCTCCCAGCGACGGGGGAAACCGTGCCCAGGGCGGACGCGGTCGCGGCAGAGGGCGCGGTGGAGGTGGTGGACGCAGCAGCGCGCCGCGGAACAGTGGCGCTGGTGGCTCTGGCGGCGGTGGCCGTGACAAGAGCCACATCAAGTGCTACAACTGCGAAGAATTCGGCCACTACTCCACCCAGTGCCCTCATCCCAAGAAGAAGAAGGTGGAGGCCCATCTCGCGCAAACCGATGACGCAAACCCTGCATTGTTACTGGCGGTGACCGAAGACGAGCCGGCGAGCGGGCTGGTCGTACACGAGGAGCGTGTGTGGCCGCAGCTGCTGTTGGCTGACAGCGGAGCAGCCACCGGGGACATCTGGTTCCTGGACAATGGGGCAAGCAACCACATGACGGGTGATCGTGCTAAGTTCAGAGATCTGGACGTATCAATCACCGGGAGCGTCAAGTTCGGGGACGCCTCAACTGTGAAAATTCAGGGGAAAGGGTCTATCCTGTTCTCCTGCAAGAATGGGGATCAATGGCTGCTGCAGGATGTTTTTTATATCCCTAGTCTGTGTTGCAACATGGTGAGTTTGGGCCAGCTCACAGAAACAGGGCACAGAGTGGTGATGGATGAAGATGTGCTCGAGGTGTTCGACAAAAGTCCCCTGCGGCTGGTTATGCGGGTGAGGCGCACCCCTAATCGGCTGTACCGGATCGAGCTGAAGCTAGCCACTCCGGTGTGCCTGCTGACAAGGATGGATGAGCCAGCATGGCTCTGGCATGCACGGCTTGGGCATGTCAATTTCCAGGCGATGAAGCTGTTGGCTGACAAGGGCATGGCTGGTGGCATCCCGGCGATCACACATCCAAACCAGCTCTGTCAGGCATGTCTGGTTGCAAAGCAGATAAGGCAGCCGTTTCCCGCAACGGCGAACTTCAGGGCGGAGGAGCCGCTTGAGTTGCTCCACATTGATTTATGTGGACCGATCACCCCGACAACTATGGCCGGTAATCGTTACTTTATGCTAATTGTTGATGATTTCTCACGGTGGATGTGGATGTTCGTGATCAAAACGAAGGACCAGGCACTAGAGGCTTTCACCAAGTTCAAGCCGCTGGCCGAGAACACGGCCGGGCGGCGCATCAAGACGCTGAGATCGGATCGCGGTGGCGAATTCCTGTCGGGCGAATTCGCGCAGTTGTGCGAGCAGGCGGGCATCCAGCGGCATCTGACGGCGCCATACTCACCCCAGCAAAACGGGGTGGTGGAACGCCGAAATCGTTCGGTAATGGCGATGGCACGATCTCTGATGAAAGGGATGTCAGTGCCGGGCAGGTTTTGGGGGGAGGCGGTGCGCCATGCGGTGTATCTCCTCAACCGGCTACCGACGAAGGCGATGGGCGATCGGACCCCGTTCGAGGCATGGACGGGGCGCAAGCCGCAGCTGGGACACCTGCGGGTGTTTGGGTGCATAGCACACGCCAAGATCACGACGCCCAACCAGAAGAAACTTGATGACCGGAGCGCGCCGTATGTGTATCTCGGCGTGGAAGAAGGCAGCAAGGCGCACCGCCTGTTCGACCCGCGTTGTGGGCGTATCCATGTAAGTCGTGATGTCATTTTTGAAGAAAATGTACCTTGGCAATGGAGTGTAGTCGCAGGAGAGCAAAACTCTACCGAGTTCACGGTGGAGGAGGATGGAGTTGATGCACCGCCGGCAGGAGCGCCGGCCTACCCAGTACCGCGGTACCGGGCGCCATCCCCGGCAGTCCCGCAATCGCCTCTGGCAAGCCCGGTAGGGGCGTCACCGTCATTGCCGACTTCGCCCCAGTCATCACCGAGCTCTACACCGCCTTCAACACCTGCTACCGGCTCTGTCGGGCCGGTGGCGTCACCAGGTTCCAGCGGTGACCTTAGAAGCGATGAGGGTCCCGTCCGGTTCAGGAGTCTTGAAGATATCATGCGGGAGGCACCCCGCGTGGACCTGGTGGAAGATGAACACGATGGGGACGCGCTGCTTGCAGAGATGGAGGAGCCATCGAGCTACCGCGAGGCAGCTGGCCAGCCGGCGTGGGAGAACGCCATGGCACAGGAGCTGCAGGCGATTGAGAAGAATTCAACATGGGCTCTCACTGCATTGCCGGCAGGACACAAACCCATTGGCCTCAAGTGGGTGTACAAGCTGAAAAAGAACACTGCCGGCGAAGTAATCAAGCACAAGGCTCGTTTGGTTGCAAAGGGCTATGTTCAGCGTCAAGGGGTGGATTTTGAAGAAGTGTTCGCGCCAGTGGCGCGGCTTGACACAGTTCGTGTCATCCTGGCTATCGCAGCTGATCGGCGGTGGGAAGTGCACCACCTCGACGTCAAATCGGCGTTCTTGAATGGCGATCTTGAAGAAGAAGTGTACGTAGCCCAGCCAGAGGGTTTTGTGAAACGAGGAGAAGAACACTTGGTGCTCAGGCTGAGCAAGGCGCTCTATGGATTGCGCCAGGCCCCGCGGGCGTGGAACACGCGTCTCGATAAGTGCTTGAAAGAACTCGGTTTTGCACGGTGCACGCAGGAGCAGGCCGTGTATACTAGAGGAAAGGGGCAAGCTGGTGTAATCGTTGGTGTGTATGTTGATGACTTGATTGTCACAGGAGAAAATCCACAGGAGATAGCCATGTTCAAGCAGCAGATGATGGGGGAATTTGAGATGAGTGATCTCGGTCTTCTCTCTTACTATCTGGGGATAGAAGTAATTCAGGGGGAGAATGGGATTGCTATCAAGCAAGCTGCGTATGCGAAGAAGATTCTGTCTCAGTTTGGTATGCAGGGATGTAATCCCACCTCAATCCCCATGGAGCCACGGTCGCTGCTGCACAAGGATGCTGATGGAAATCCAATTGATGCGACCGAGTACCGGCGTGTCATCGGGTGCCTGCGATACTTGTTACACACCAGGCCGGATCTGTCCTACGCCGTTGGCGTGGCGAGCAGGTTCATGGAGCGGCCGACAACGATGCATCTCAAGGCGGTCAAGATGATACTCAGATATCTAAAGGGGACGCTGGACTCTGGTCTGGTGTTTGCAAGCGGCAGTGGCTCGTTGGACATCACGGGTTTCACTGACAGTGACTTGGCAGGTGACATGGATGACCGTCGGAGCACCGGCGGCATGGCGTTCTATGTGAACAGCAGCTTGGTGTCTTGGTGTTCTCAAAAGCAGAAGACAGTGGCGCTCTCGTCTTGCGAGGCAGAGTTCATGGCGGCCACTGCAGCAGCATGTCACGCACTCTGGCTTAGGGCGTTGCTGAGCGAGATGATGGGTACTGAAGCAAAGCCGGTGAAACTTTTTGTTGACAACAAGTCGGCGATCGCCTTGATGAAGAATCCTGTGTTCCACGGGAGGAGCAAGCATATTGATACCCGCTACCATTTCATTCGTGAATGTGTTGAGAGTGGGCAGATTCTGATTGAGTTCGTTAGTTCTGAGGAGCAGCGAGCAGATGCAATGACAAAGGGACTGCCGGCGGCAAAGCTGGCGACTGCACGGCACCTGTTGGGTGTGCGTGATCTCAGGCCACGCCAAGACTAA</cdnaseq>

Protein Sequence

<aaseq>MALVPAGAAADPARGSSGSAFSYPQLTATNYTSWCIRVQAMMEDQGVWDAIEPAAGVAVDPRRDKKAKSHLLQSLPEDLLMQVAKKRSAKEVWDCLKTRFVGADRVREARLQTLKGEFGAMVMEPGETLDQYAGRITAMSVRHSALGSTLSDSAMVKKLFDTVPEKFISLVAGIEQFYEIDNMPFEEAVGRLKAYEERVRKKKAAAGGVTADGQVLLTQAEWEARFRKDGSESSSPQKNKPPSDGGNRAQGGRGRGRGRGGGGGRSSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPHPKKKKVEAHLAQTDDANPALLLAVTEDEPASGLVVHEERVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRCGRIHVSRDVIFEENVPWQWSVVAGEQNSTEFTVEEDGVDAPPAGAPAYPVPRYRAPSPAVPQSPLASPVGASPSLPTSPQSSPSSTPPSTPATGSVGPVASPGSSGDLRSDEGPVRFRSLEDIMREAPRVDLVEDEHDGDALLAEMEEPSSYREAAGQPAWENAMAQELQAIEKNSTWALTALPAGHKPIGLKWVYKLKKNTAGEVIKHKARLVAKGYVQRQGVDFEEVFAPVARLDTVRVILAIAADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAGVIVGVYVDDLIVTGENPQEIAMFKQQMMGEFEMSDLGLLSYYLGIEVIQGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKPVKLFVDNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVSSEEQRADAMTKGLPAAKLATARHLLGVRDLRPRQD</aaseq>

Gene Sequence

<dnaseqindica>1..4284#ATGGCGTTGGTTCCGGCGGGAGCCGCAGCGGATCCGGCGAGGGGGAGCTCAGGGAGTGCGTTCTCCTACCCACAACTCACGGCGACGAATTACACCAGCTGGTGCATTCGCGTTCAGGCAATGATGGAGGACCAGGGCGTGTGGGACGCCATCGAGCCGGCGGCCGGGGTGGCCGTCGACCCAAGAAGGGACAAGAAGGCGAAGTCCCATCTGCTGCAGTCCCTCCCGGAGGACTTGCTGATGCAGGTGGCAAAGAAGAGATCGGCAAAGGAAGTGTGGGATTGCTTGAAGACAAGGTTCGTGGGCGCGGACCGCGTTCGCGAAGCGCGCCTGCAGACGTTGAAGGGTGAATTTGGTGCCATGGTGATGGAGCCGGGGGAAACTCTGGATCAGTACGCGGGCCGCATCACCGCGATGAGCGTGCGTCACTCGGCGTTGGGCTCGACACTGAGTGATTCCGCGATGGTGAAGAAGCTGTTCGACACGGTGCCAGAGAAATTCATCAGCCTCGTCGCAGGTATTGAGCAGTTTTATGAGATTGATAATATGCCATTTGAGGAGGCGGTGGGTCGTCTCAAGGCCTACGAAGAACGAGTTCGCAAGAAGAAGGCGGCCGCTGGTGGTGTCACCGCCGACGGTCAAGTACTTCTCACTCAGGCGGAGTGGGAGGCGCGTTTCAGGAAGGACGGCAGCGAGTCGTCTTCGCCGCAGAAAAACAAACCTCCCAGCGACGGGGGAAACCGTGCCCAGGGCGGACGCGGTCGCGGCAGAGGGCGCGGTGGAGGTGGTGGACGCAGCAGCGCGCCGCGGAACAGTGGCGCTGGTGGCTCTGGCGGCGGTGGCCGTGACAAGAGCCACATCAAGTGCTACAACTGCGAAGAATTCGGCCACTACTCCACCCAGTGCCCTCATCCCAAGAAGAAGAAGGTGGAGGCCCATCTCGCGCAAACCGATGACGCAAACCCTGCATTGTTACTGGCGGTGACCGAAGACGAGCCGGCGAGCGGGCTGGTCGTACACGAGGAGCGTGTGTGGCCGCAGCTGCTGTTGGCTGACAGCGGAGCAGCCACCGGGGACATCTGGTTCCTGGACAATGGGGCAAGCAACCACATGACGGGTGATCGTGCTAAGTTCAGAGATCTGGACGTATCAATCACCGGGAGCGTCAAGTTCGGGGACGCCTCAACTGTGAAAATTCAGGGGAAAGGGTCTATCCTGTTCTCCTGCAAGAATGGGGATCAATGGCTGCTGCAGGATGTTTTTTATATCCCTAGTCTGTGTTGCAACATGGTGAGTTTGGGCCAGCTCACAGAAACAGGGCACAGAGTGGTGATGGATGAAGATGTGCTCGAGGTGTTCGACAAAAGTCCCCTGCGGCTGGTTATGCGGGTGAGGCGCACCCCTAATCGGCTGTACCGGATCGAGCTGAAGCTAGCCACTCCGGTGTGCCTGCTGACAAGGATGGATGAGCCAGCATGGCTCTGGCATGCACGGCTTGGGCATGTCAATTTCCAGGCGATGAAGCTGTTGGCTGACAAGGGCATGGCTGGTGGCATCCCGGCGATCACACATCCAAACCAGCTCTGTCAGGCATGTCTGGTTGCAAAGCAGATAAGGCAGCCGTTTCCCGCAACGGCGAACTTCAGGGCGGAGGAGCCGCTTGAGTTGCTCCACATTGATTTATGTGGACCGATCACCCCGACAACTATGGCCGGTAATCGTTACTTTATGCTAATTGTTGATGATTTCTCACGGTGGATGTGGATGTTCGTGATCAAAACGAAGGACCAGGCACTAGAGGCTTTCACCAAGTTCAAGCCGCTGGCCGAGAACACGGCCGGGCGGCGCATCAAGACGCTGAGATCGGATCGCGGTGGCGAATTCCTGTCGGGCGAATTCGCGCAGTTGTGCGAGCAGGCGGGCATCCAGCGGCATCTGACGGCGCCATACTCACCCCAGCAAAACGGGGTGGTGGAACGCCGAAATCGTTCGGTAATGGCGATGGCACGATCTCTGATGAAAGGGATGTCAGTGCCGGGCAGGTTTTGGGGGGAGGCGGTGCGCCATGCGGTGTATCTCCTCAACCGGCTACCGACGAAGGCGATGGGCGATCGGACCCCGTTCGAGGCATGGACGGGGCGCAAGCCGCAGCTGGGACACCTGCGGGTGTTTGGGTGCATAGCACACGCCAAGATCACGACGCCCAACCAGAAGAAACTTGATGACCGGAGCGCGCCGTATGTGTATCTCGGCGTGGAAGAAGGCAGCAAGGCGCACCGCCTGTTCGACCCGCGTTGTGGGCGTATCCATGTAAGTCGTGATGTCATTTTTGAAGAAAATGTACCTTGGCAATGGAGTGTAGTCGCAGGAGAGCAAAACTCTACCGAGTTCACGGTGGAGGAGGATGGAGTTGATGCACCGCCGGCAGGAGCGCCGGCCTACCCAGTACCGCGGTACCGGGCGCCATCCCCGGCAGTCCCGCAATCGCCTCTGGCAAGCCCGGTAGGGGCGTCACCGTCATTGCCGACTTCGCCCCAGTCATCACCGAGCTCTACACCGCCTTCAACACCTGCTACCGGCTCTGTCGGGCCGGTGGCGTCACCAGGTTCCAGCGGTGACCTTAGAAGCGATGAGGGTCCCGTCCGGTTCAGGAGTCTTGAAGATATCATGCGGGAGGCACCCCGCGTGGACCTGGTGGAAGATGAACACGATGGGGACGCGCTGCTTGCAGAGATGGAGGAGCCATCGAGCTACCGCGAGGCAGCTGGCCAGCCGGCGTGGGAGAACGCCATGGCACAGGAGCTGCAGGCGATTGAGAAGAATTCAACATGGGCTCTCACTGCATTGCCGGCAGGACACAAACCCATTGGCCTCAAGTGGGTGTACAAGCTGAAAAAGAACACTGCCGGCGAAGTAATCAAGCACAAGGCTCGTTTGGTTGCAAAGGGCTATGTTCAGCGTCAAGGGGTGGATTTTGAAGAAGTGTTCGCGCCAGTGGCGCGGCTTGACACAGTTCGTGTCATCCTGGCTATCGCAGCTGATCGGCGGTGGGAAGTGCACCACCTCGACGTCAAATCGGCGTTCTTGAATGGCGATCTTGAAGAAGAAGTGTACGTAGCCCAGCCAGAGGGTTTTGTGAAACGAGGAGAAGAACACTTGGTGCTCAGGCTGAGCAAGGCGCTCTATGGATTGCGCCAGGCCCCGCGGGCGTGGAACACGCGTCTCGATAAGTGCTTGAAAGAACTCGGTTTTGCACGGTGCACGCAGGAGCAGGCCGTGTATACTAGAGGAAAGGGGCAAGCTGGTGTAATCGTTGGTGTGTATGTTGATGACTTGATTGTCACAGGAGAAAATCCACAGGAGATAGCCATGTTCAAGCAGCAGATGATGGGGGAATTTGAGATGAGTGATCTCGGTCTTCTCTCTTACTATCTGGGGATAGAAGTAATTCAGGGGGAGAATGGGATTGCTATCAAGCAAGCTGCGTATGCGAAGAAGATTCTGTCTCAGTTTGGTATGCAGGGATGTAATCCCACCTCAATCCCCATGGAGCCACGGTCGCTGCTGCACAAGGATGCTGATGGAAATCCAATTGATGCGACCGAGTACCGGCGTGTCATCGGGTGCCTGCGATACTTGTTACACACCAGGCCGGATCTGTCCTACGCCGTTGGCGTGGCGAGCAGGTTCATGGAGCGGCCGACAACGATGCATCTCAAGGCGGTCAAGATGATACTCAGATATCTAAAGGGGACGCTGGACTCTGGTCTGGTGTTTGCAAGCGGCAGTGGCTCGTTGGACATCACGGGTTTCACTGACAGTGACTTGGCAGGTGACATGGATGACCGTCGGAGCACCGGCGGCATGGCGTTCTATGTGAACAGCAGCTTGGTGTCTTGGTGTTCTCAAAAGCAGAAGACAGTGGCGCTCTCGTCTTGCGAGGCAGAGTTCATGGCGGCCACTGCAGCAGCATGTCACGCACTCTGGCTTAGGGCGTTGCTGAGCGAGATGATGGGTACTGAAGCAAAGCCGGTGAAACTTTTTGTTGACAACAAGTCGGCGATCGCCTTGATGAAGAATCCTGTGTTCCACGGGAGGAGCAAGCATATTGATACCCGCTACCATTTCATTCGTGAATGTGTTGAGAGTGGGCAGATTCTGATTGAGTTCGTTAGTTCTGAGGAGCAGCGAGCAGATGCAATGACAAAGGGACTGCCGGCGGCAAAGCTGGCGACTGCACGGCACCTGTTGGGTGTGCGTGATCTCAGGCCACGCCAAGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030457