Os10g0554900

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0554900| Description = Protein of unknown function DUF566 family protein| Version = NM_001071876.1 GI:115483347 GeneID:4349342| Length = 26...")
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Gene Name

Os10g0554900

Description

Protein of unknown function DUF566 family protein

Version

NM_001071876.1 GI:115483347 GeneID:4349342

Length

2604 bp

Definition

Oryza sativa Japonica Group Os10g0554900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22242919..22245522

Sequence Coding Region

22243451..22243558,22243844..22243951,22244282..22244371,22244465..22244701,22244790..22245356

Expression

GEO Profiles:Os10g0554900

Genome Context

<gbrowseImage1> name=NC_008403:22242919..22245522 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22242919..22245522 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtccaatggcgtcggcggcggcgcggcgcggccgctcacggcgtcgaggcggctgctggcgcggagcgcgagcaccacggcgtcgcgcgccggcggcgccggcgcgttcgtctacgatgggatgcgcccggcgccgctcttctcgtcgaccaacttcgcgcggtccctccgtaaggcggcctcgttcggcggcggcggcaagaagcagtacagcgccgacgacgacggcgccgtcgccgtgaaggcggcggcgccgccgcggcgggcgctgagcagcaaggagaacaccgtgcacgagctgggtacggccgcggcgaggggcccgtgggagccggcgaggcggccgaggcggagctcatcgggggggtcgtcgtcgccggagaacgccgggagcaccagaggatcggccgtgctcagggacatgatgacgcggaggaaggaggagcccgagaaggaggaggcggcgcaccgcgcgcgcatgctcgccgcgcgcttgctccagtggcgcttcgccaacgcccgcatggagaaggccatggcccgcgccaccgccgccgccgagaacaagctgttctacacgtggctgcgggtggcggagctccggaacatccaggcggcgaagcggatcgtggcgcagcggcggcggcagaagctgaagctggcgaggctgctccggccgcagctctcgctgctcgcgtcgtgggactccctcgccaagccgcacgccgacgccgtcgacgacctcggcgccgtcctcgccgccgcctgcaccgcgctccccttagccgacggcgcccaaggcgacatggagagcttgcacgaagccatgttcgcgtgcgtgggcacggtgaacgacatcgaagccaacgccgacatgttcttcgccacggctggggtgacgagcagcacgctggaagaactgtcgacgacgataaagcaggaggtggagggcctgcaggaagccatgaagctggcaaggattgtcactagcttgcaggtgcaggaagtgagcctccgggcaaacttgattcagattcaggcaaagcagaaggttgacatgggagcatctgtcccggcgattgcaacttctggttggtgtttctga</cdnaseq>

Protein Sequence

<aaseq>MESNGVGGGAARPLTASRRLLARSASTTASRAGGAGAFVYDGMR PAPLFSSTNFARSLRKAASFGGGGKKQYSADDDGAVAVKAAAPPRRALSSKENTVHEL GTAAARGPWEPARRPRRSSSGGSSSPENAGSTRGSAVLRDMMTRRKEEPEKEEAAHRA RMLAARLLQWRFANARMEKAMARATAAAENKLFYTWLRVAELRNIQAAKRIVAQRRRQ KLKLARLLRPQLSLLASWDSLAKPHADAVDDLGAVLAAACTALPLADGAQGDMESLHE AMFACVGTVNDIEANADMFFATAGVTSSTLEELSTTIKQEVEGLQEAMKLARIVTSLQ VQEVSLRANLIQIQAKQKVDMGASVPAIATSGWCF</aaseq>

Gene Sequence

<dnaseqindica>1965..2072#1572..1679#1152..1241#822..1058#167..733#cggcaacaagtttcttgaagccggagcactagctcgatcgagagctagtgctgcagggttctccccaacttagaatctagggtttgccagcaatgtacttgctctgatcggccaagcttaatcgccgcgatatttattaacttatatttattaatttatttaatttatggagtccaatggcgtcggcggcggcgcggcgcggccgctcacggcgtcgaggcggctgctggcgcggagcgcgagcaccacggcgtcgcgcgccggcggcgccggcgcgttcgtctacgatgggatgcgcccggcgccgctcttctcgtcgaccaacttcgcgcggtccctccgtaaggcggcctcgttcggcggcggcggcaagaagcagtacagcgccgacgacgacggcgccgtcgccgtgaaggcggcggcgccgccgcggcgggcgctgagcagcaaggagaacaccgtgcacgagctgggtacggccgcggcgaggggcccgtgggagccggcgaggcggccgaggcggagctcatcgggggggtcgtcgtcgccggagaacgccgggagcaccagaggatcggccgtgctcagggacatgatgacgcggaggaaggaggagcccgagaaggaggaggcggcgcaccgcgcgcgcatgctcgccgcgcgcttgctccagtggcgcttcgccaacgcccgcatggagaaggccatggcccgcgccaccgccgccgccgaggtgaggccgtgacaccgatcgccatggacgcacgctagctcgcttcccgtacatgttctgacggcgcgccatggatggatggatgcagaacaagctgttctacacgtggctgcgggtggcggagctccggaacatccaggcggcgaagcggatcgtggcgcagcggcggcggcagaagctgaagctggcgaggctgctccggccgcagctctcgctgctcgcgtcgtgggactccctcgccaagccgcacgccgacgccgtcgacgacctcggcgccgtcctcgccgccgcctgcaccgcgctccccttagccgacggcgcccaagtatactccactactcccctcgtcgtctctgacagaaatatttacactctttgatcaaccaaccaaccatcaacaaattgctcacatttgcagggcgacatggagagcttgcacgaagccatgttcgcgtgcgtgggcacggtgaacgacatcgaagccaacgccgacatgttcttcgccacggtacacgcttaattaattcagctttttgataaatcaaccactaaactgtcgaaaaataaactgagcaactaaaaataatctaatggaaaaattttacatctgcgttcttaacggtttaaaaccaatattaaaaataaactacaatgaaaaaaccttagaaaaatcaacgacttaaactaacttttaaaatttaaaatttggttttggctgataaagataacaaacaggcgattttgaggcgaggttactaggaaaggttagtttagatgcaattatatgaaccttgcatgagtgattgatttttttttttggtggtgcattattattcaggctggggtgacgagcagcacgctggaagaactgtcgacgacgataaagcaggaggtggagggcctgcaggaagccatgaagctggcaaggattgtcactagcttgcaggttggtaaatggtcgtttttagctgatgcctcactctcaccagaaccagatttagtctagtctaatctggtctagtgagatcagtatcttctgtactactaagatttggattgattgtcatatactccatttctccagcactagtgctgcctggctgcctactccctaattctatttgtttttgtctagtctagttgttcttttgttgcaacgaaagctcaagctcctggattagttgatgacaaataattctgtttcatggcttacattgtgtttggactgcaggtgcaggaagtgagcctccgggcaaacttgattcagattcaggcaaagcagaaggttgacatgggagcatctgtcccggcgattgcaacttctggttggtgtttctgatcatcaaagtacacggagatggagcagagtgtcaatcactcgcccacttatataaattaagatgcaaagagtactaatgctagtaccagcgtcacggactgaccggtgatctgagccgacattactgatgtttttatgtatatgttcgtgcctgaaacaagtaaattaaaacaaaaaattagacgatgaccaagaaattaaagatacatggtcccctggttggccggtcgcattactttcccaggtaaatgttcagtttgttggaagggcactaatttgttggtcttttcatgttcatgaatgttaagttgatggatggatgtaattcggtttgattaacagtgtatatatgtatcttacgtatatttaagggcgttggtgttcatgttggtgtgtagaattgaatatcacagtttgtggatagagattgagttattgaggtgtatgcaatatgcatattcagtgttcacaaactgtatatcaattattccttcaagggcttgtcctttgagttacccaagagtcaacaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0554900, RefSeq:Os10g0554900