BGIOSGA030471

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Revision as of 09:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030471| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030471, complete gene.| tag = OsI_307...")
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Gene Name

BGIOSGA030471

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030471, complete gene.

LocusTag

OsI_30782

Ensembl Transcript ID

BGIOSGA030471-TA

Ensembl Protein ID

BGIOSGA030471-PA

Length

4258

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6762087..6766344

Sequence Coding Region

6762087..6762182,6762345..6762511,6762705..6762817,6762998..6763072,6763154..6763267
,6763485..6763552,6763630..6763713,6763907..6763960,6764045..6764125
,6764220..6764313,6764442..6764515,6764597..6764707,6764789..6764833
,6764917..6764973,6765060..6765164,6765512..6765615,6765949..6766114
,6766207..6766344

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6762087..6766344 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6762087..6766344 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCATGAACGCGGACCTCGGCAAGCCGAGGGAGCTCACCGGGTTGCAGCAGAGGAGGGCTCTGTATCAGCCGGAGCTGCCTCCATGCCTTGAGGGAAAGGCCATCAGAGTGGAGTTTGGCGATTCGACGACGACCATCGACCCGACATGCGCAAATATGGTTGTGCAGGAATTTCCCAACACCTTTGGTCAGCCTCTGGTACATTTCCTGAAGCCGAACAAGATGGATGCACAAGCCAACGATGAACATCCACCAATCAGGGTTGGTGTGGTGTTCTCTGGGAGGCAATCGCCAGGGGGGCACAATGTGATATGGGGCATCTATGATGCTATGAAAACTCAAAATCTACAAAGTGTTTTGCTTGGATTTATTGGTGGCACAGAAGGCCTATTTGCAAATCAGACATTGGAGATCACAGATGATGTTCTTTCAGCATATAGAAACCAAGGTGGTTTTGATTTTCTCGGCAGAACTGTTGATCAAATCCACACAACTGAGCAAGTGAATGCTGCAATGTCAACATGCTGTGATCTTGACTTGGATGGCCTTGTCATCATTGGAGGGGTGACCTCCAATTCAGATGCTGCTCAGCTTGCAGAAACATTTGCCAATCACAACTGCAAGACAAAGGTTGTAGGCGTGCCTGTTTCATTAAATGGTGATCTCAAGAATCAGTTTGTTGAGACAACTGTTGGGTTTGATACAGTGTGCAAGGTGAATTCCCAGCTTATAAGTAATGTTTGCCTCGATGCAATCTCAGCTGGGAAGTACTACCATTTTGTCCGTGTGATGGGTTGGAAAGCATCTCATGTTGCCTTGGAGTGTGCACTTCAATCACAACCAAATATGGTTATTTTAGGGGAAGAAGTGGCATTTTCCAAGCTCACTTTGAAGGAAATTATAAGCAAGATATGTGATGGAGTGCAAGCAAGGGCAGCACAAGAGAAGTACCATGGTGTATTACTTATTTCGGAGGGACTAATCGAAAGCATTCCAGAAATGTTTGCACTTATTCAGGAAATTAATATTCTCCACAGCAATAAAGTTCCTGAGAACAACATTCCATCTCAACTTTCTCCATGGGCTACTGCCTTGTATAATTACTTGCCTCCTTTCATAAGAAGAGAGTTGCTGCTACATCAAGACTCCGATAACTCAGCACAATTGTCCCAGATTGATACCGAGCAACTCTTAGCTCATTTAGTAGAAGCAGAAATGAACAAGCGAATGAAAGAGGGGAAATACATTGGACGGAAATTCAGCTCCGTTTGCCACTTTTTCGGGTATCAAGCGCGAGGATCCTTACCATCAAACTTCGATTGTGATTACGCCTATGCAATGATGAGTGTGAAGAGGCACTCACGCAGTCCTGGAGCTGTTCCTACTGGAAAGCCAGTTATCCATCCTTCTCCAGTTGACCTGCAAGGGAAGGCTTATGCGCTCCTGAGAGAGAAAGCCTCGAGCTTCCTATTAGATGATTTCTACAGAACTCCAGGGGGCATTCAATTTGATGGATCTGGAACAAATGTTAAGCCAATCACACTGACTGTCGAAGACCAAGACTACCTGGGTGACATTGAGCTACTGCAAGACTACTTGGAGAAGGTGAGGAACATTGTGAAGCCCGGATGCTCGAGGGAGATCCTGAAGGCGGCGATAAGCTCGATGTCATCAGTGAAGGATGTGCTGAAGGTTATGTCGGCTCCCTTCTATGCAGAGCTCCCTCTGTTCAATCTGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MSMNADLGKPRELTGLQQRRALYQPELPPCLEGKAIRVEFGDSTTTIDPTCANMVVQEFPNTFGQPLVHFLKPNKMDAQANDEHPPIRVGVVFSGRQSPGGHNVIWGIYDAMKTQNLQSVLLGFIGGTEGLFANQTLEITDDVLSAYRNQGGFDFLGRTVDQIHTTEQVNAAMSTCCDLDLDGLVIIGGVTSNSDAAQLAETFANHNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCKVNSQLISNVCLDAISAGKYYHFVRVMGWKASHVALECALQSQPNMVILGEEVAFSKLTLKEIISKICDGVQARAAQEKYHGVLLISEGLIESIPEMFALIQEINILHSNKVPENNIPSQLSPWATALYNYLPPFIRRELLLHQDSDNSAQLSQIDTEQLLAHLVEAEMNKRMKEGKYIGRKFSSVCHFFGYQARGSLPSNFDCDYAYAMMSVKRHSRSPGAVPTGKPVIHPSPVDLQGKAYALLREKASSFLLDDFYRTPGGIQFDGSGTNVKPITLTVEDQDYLGDIELLQDYLEKVRNIVKPGCSREILKAAISSMSSVKDVLKVMSAPFYAELPLFNLN</aaseq>

Gene Sequence

<dnaseqindica>1..96#259..425#619..731#912..986#1068..1181#1399..1466#1544..1627#1821..1874#1959..2039#2134..2227#2356..2429#2511..2621#2703..2747#2831..2887#2974..3078#3426..3529#3863..4028#4121..4258#ATGTCCATGAACGCGGACCTCGGCAAGCCGAGGGAGCTCACCGGGTTGCAGCAGAGGAGGGCTCTGTATCAGCCGGAGCTGCCTCCATGCCTTGAGGTTTGCAAGCTCTCCTTCATCCTCACCACTTGCAAGCTGCATCAAGCTACTTTTTTTCATCACTAATTATGAAAAGTTGCAAGTTTTGAACACAGTATGTTCACTTTGTATTTAGGTCCTTGTATTTGTATTCTCTCAAAGTTTTTCAACCAACATGTTCAGGGAAAGGCCATCAGAGTGGAGTTTGGCGATTCGACGACGACCATCGACCCGACATGCGCAAATATGGTTGTGCAGGAATTTCCCAACACCTTTGGTCAGCCTCTGGTACATTTCCTGAAGCCGAACAAGATGGATGCACAAGCCAACGATGAACATCCACCAATCAGGTTCGTTTTCCTTTTTCAGAATGGTGCTAAACCCCATCCATTTTTCAGTTGAGAAAAAAAATCAGAACAAATCAAGTTTGGCTTGAACACCGAATTAGTGTGATAGCAACTAGTGTCAATTCTTTATCATTGAAAACTTGATATTTGATCTATCAACACACAATTCTCAGGCTTGATATTTACTTGAATCTAGGGTTGGTGTGGTGTTCTCTGGGAGGCAATCGCCAGGGGGGCACAATGTGATATGGGGCATCTATGATGCTATGAAAACTCAAAATCTACAAAGTGTTTTGCTTGGATTTATTGGTGAGTAATTGAGCATACTTTCAATTTCTAGATTTTAAATGGACTAACAAGAAGCAGTGTGATATTTACATTATTGGATTGCTTGTTGTGACATTTATTGGCTTAGTATATATATATTGATTTCCTGCAAAAAGATATGATAAAAATAAGTCTCATGAAGAACTTTGTATTTCTAAATAGGTGGCACAGAAGGCCTATTTGCAAATCAGACATTGGAGATCACAGATGATGTTCTTTCAGCATATAGAAACCAAGGTTTAAATTTATTGATCTTGATTGCTAGCTTTCTAAATATATTATGGCCTATATAACAAGAAAGTCTTTACCTTCTTGAAGGTGGTTTTGATTTTCTCGGCAGAACTGTTGATCAAATCCACACAACTGAGCAAGTGAATGCTGCAATGTCAACATGCTGTGATCTTGACTTGGATGGCCTTGTCATCATTGGAGGTACTAATAGGTTATACCAGCAAATTTGCTGATGAAAAAAAAAAAACATCACAATGGATTTTACATGAGTACTTCCATGCCATTTCAATCTAGAGTGAATAAAGAGCTGTGAAAAAATTGGGGTTACATGAAAATAAGGACCAAGCAATCAACCTTATTTCAAAAACATTCTCTGCCTTAAGGACTTGTGTAATTCTTGATGTTATCTTGTCTTCAGGGGTGACCTCCAATTCAGATGCTGCTCAGCTTGCAGAAACATTTGCCAATCACAACTGCAAGACAAAGGTATATACACATTGTTAATTCCACATCCTCACATTGGAATATAACTCCCATTTTCAGATCTTTATCCTGTTTGACAGGTTGTAGGCGTGCCTGTTTCATTAAATGGTGATCTCAAGAATCAGTTTGTTGAGACAACTGTTGGGTTTGATACAGTGTGCAAGGTGAGTCTTGCAGGCTATGCAGCAAATAAAATTCCAATTTATAGCTAAGACAGTATCTACAGTTCCCCAAAAAAAATTAAATGAAGGATACAAGTGTACGATTCCCCCAAAAAAATTAAATAAAGGATACAAAGTGTTACATCATGACATGTTTTTTTTAATGTAAATGTCTTCTATGAAAATGTCTTTTCAGGTGAATTCCCAGCTTATAAGTAATGTTTGCCTCGATGCAATCTCAGCTGGGAAGGTACACTCTATTATAGTCTATCATAATAAATTGGACTTATTAGGATCACTTATTATTTATCTAATTTATATAATTTCCCTGCAGTACTACCATTTTGTCCGTGTGATGGGTTGGAAAGCATCTCATGTTGCCTTGGAGTGTGCACTTCAATCACAACCAAATATGGTCTGCCTTGTCGCCTTGATCAAATGCATCGTAAAATCTAGCATAAGTGAACAGTTGTAGAATTATTTTTATAATTGTACATTTTCACATGCAGGTTATTTTAGGGGAAGAAGTGGCATTTTCCAAGCTCACTTTGAAGGAAATTATAAGCAAGATATGTGATGGAGTGCAAGCAAGGGCAGCACAAGGTCTCTACAATTCATTGGCTGTCTTAAGTTGATGAATTCTCACTAAAGACTGAATTGTGCATACATCAATTAAATAGAAACATGAGGTAACTTTGTGACAATCTAATATATTGGATATAATTTTTCAGAGAAGTACCATGGTGTATTACTTATTTCGGAGGGACTAATCGAAAGCATTCCAGAAATGTTTGCACTTATTCAGGTTTATACTTGTTACTACAATAAAATGCAGTGACATCTCATTTCTATGAAATCTTATTGGTTTCCTTTATGCGTATTGTAGGAAATTAATATTCTCCACAGCAATAAAGTTCCTGAGAACAACATTCCATCTCAACTTTCTCCATGGGCTACTGCCTTGTATAATTACTTGCCTCCTTTCATAAGAAGAGAGGTATTGGTGTATTAAATTACTAACATAATTTATTTTATTAATAAAAATTGTGGTCTGAAGATTTGGAACTTTCTGTTATAGTTGCTGCTACATCAAGACTCCGATAACTCAGCACAATTGTCCCAGGTTTGTGTTTTCTGGAATGCTCAGCAGTCAGTTATTCATGGAAATGCAATTTTTGATGTCAAACTTTTTATTGAAATTTTCAGATTGATACCGAGCAACTCTTAGCTCATTTAGTAGAAGCAGAAATGAACAAGCGAATGGTAAGTTCAGTTAAAACTTGAGCTTTATGTGCCCAGTTCAGTATTCAGTTCTTTTTTTTTTTAATTTGATTGTGCTTGATTCTCAGAAAGAGGGGAAATACATTGGACGGAAATTCAGCTCCGTTTGCCACTTTTTCGGGTATCAAGCGCGAGGATCCTTACCATCAAACTTCGATTGTGATTACGCCTATGTAAGTAGTAAACCTGAACTATGTTCGTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACATGCTATAGGCTCTAAACCTTGAAGAATGCAGGTTCTTGGTCATATCTGCATGCACATACTAGCAGCTGGGCTGAATGGTTACATGGCTTTTGCAACAAATCTGAAGGAACCAACAAACAAATGGCGATGCGCTGCCGTTCCTCTAACAGTATGCTTTTTAGTTGACTGTATTGTTTTCATTAATTATGCTCATTTAAAATGTTCGAGTTTGTGACGTGATACACTGTTTCTAAATCTTACCAGGCAATGATGAGTGTGAAGAGGCACTCACGCAGTCCTGGAGCTGTTCCTACTGGAAAGCCAGTTATCCATCCTTCTCCAGTTGACCTGCAAGGGAAGGCTTATGCGTAAGTCCATAGTTAACAGCCTTAAAACTATTAATTTGCTGCTTCAGGCAAAAGACTGAACACTGACATCCATGAATCTCATTCAGTGGCTTGTCATAAAAAAATCATGTGTTGATTCCTCCGGTAAAATGTTAATAATATTGCCACAAAAGTTTTTAGTTAATGAGGCAACAGTAAGATGATATAGAATTAGTTTAGATTAACTCTGCATAATATGTAGACACATAAATGCATCATTTTTTGTGTTAATATCATTGATCTTTTACAGTGACTCTTCAGATTATAAGGCAGAGGAAAACTATAAACTAATTCTTGTTTCTCTCATTACTCTAGGCTCCTGAGAGAGAAAGCCTCGAGCTTCCTATTAGATGATTTCTACAGAACTCCAGGGGGCATTCAATTTGATGGATCTGGAACAAATGTTAAGCCAATCACACTGACTGTCGAAGACCAAGACTACCTGGGTGACATTGAGCTACTGCAAGACTACTTGGAGAAGGTTTGTCAACAAAATCTGAACCTGTTAACTTCATAAGAGCTAAAAAAAAAATTCAGTACCTGTAGTTGAAGCTTGTCAAACTGATATCCCAGGTGAGGAACATTGTGAAGCCCGGATGCTCGAGGGAGATCCTGAAGGCGGCGATAAGCTCGATGTCATCAGTGAAGGATGTGCTGAAGGTTATGTCGGCTCCCTTCTATGCAGAGCTCCCTCTGTTCAATCTGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030471