BGIOSGA030488

From RiceWiki
Revision as of 09:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030488| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030488, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030488

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030488, complete gene.

LocusTag

OSJNBA0092O08.33

Ensembl Transcript ID

BGIOSGA030488-TA

Ensembl Protein ID

BGIOSGA030488-PA

Length

4872

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7382942..7387813

Sequence Coding Region

7382942..7383049,7384945..7384997,7386203..7386711,7386888..7387048,7387177..7387254
,7387408..7387489,7387587..7387813

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7382942..7387813 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7382942..7387813 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTTAGGCGGATTCGAGGCGACGAACAAGAGGAGGATAGGGATGATGGTGGGTGGCCTGAGGCCAAGAGGAAGAGACAGACGGTGCCATCTTTCATATCGTTAGTTCAGGAGGAACTGGAAAGAAGCCTTTCTAAACATGGACACCTACTGTACAGATCTCCTCCAATGCTTGTCAACTCCGTCGATTCTTCGCTGAAGCTCGCCTTCGCGAAGCGGCTCCAGCTCCCAATCTTCACCAACAACAAGCTCGTCGACGTCGACAACAACCCTCTCCAAGTCCACCTCCTTCACATGAGCTCCACCACCACCTCTCATCATCATCTCCCCATGATCAAGAAGCTGGAGGTGCTAGTCCTGGATGGAGATTTCAGTCATGGTGATGAGGGATGGAGCAGCGACGAGTTCAGCGGCGCCATCGTGAGGGAGAGGGAAGGCAGGAGGCCACTGCTCGTCGGCACGCTCAATGTGGCCATGGCCGATGATCATCTTGGCGTTGCATTCATTGATGACGTGGCGTTCACCGACAACTCGAGCTGGACCAGGAGCAGGAGGTTCAGGATCGGCGTGCGCGCCGTGGCGGTGGCGGGTAGCGGCGATGGCGGCGGGCTGAGGATCCGGGAGGCGGTGAGCGAGAGCTTCATGGTGAAAGATCACCGGGGAGAATCGTACAAGAAGCATTTCCCTCCGAGGCCAGATGATGAGGTGTGGAGGCTGAAGAACATACGGAAAGATGGGCCAATCCACAAGAGGCTGGAATCTGAACGTGTCAGGAATGTGCAGGGTTTTCTGAACCTGCATGCCACCAACCCTGAAAAGCTCAGGAAGCTCGTTGTCATGTCCGATCGGCTCTGGAAGGCAACACTGCACCACGCGAAAACATGCGATTTTAGAGCTGCAGAAATGATGCAAGTGAAGCAATCTTCAATCGAGGCATACCAGAATTGGGATCAGCTGGACGAAGCTGAGACTAACAAGACAGCCTCAGGCAATCTTGGTCAGGCACATGAAGGATCACTACAGGCAGATGAGATAGGCACCGTATCAGGGCCTCATTTCCAGAGCAGAAACCAGATGGATTCTGAAGATTCATTGTCTGCTGCTGCTGTAACTGAAGATGCAGATGATGCACTGTGGAGCCCTTGCATGACAAGTGATGGCCATGGCTTGATCATGTGGAAAAACAACACTTCAGTGTGGGACCAAACGAACTAA</cdnaseq>

Protein Sequence

<aaseq>MAFRRIRGDEQEEDRDDGGWPEAKRKRQTVPSFISLVQEELERSLSKHGHLLYRSPPMLVNSVDSSLKLAFAKRLQLPIFTNNKLVDVDNNPLQVHLLHMSSTTTSHHHLPMIKKLEVLVLDGDFSHGDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFIDDVAFTDNSSWTRSRRFRIGVRAVAVAGSGDGGGLRIREAVSESFMVKDHRGESYKKHFPPRPDDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLVVMSDRLWKATLHHAKTCDFRAAEMMQVKQSSIEAYQNWDQLDEAETNKTASGNLGQAHEGSLQADEIGTVSGPHFQSRNQMDSEDSLSAAAVTEDADDALWSPCMTSDGHGLIMWKNNTSVWDQTN</aaseq>

Gene Sequence

<dnaseqindica>1..108#2004..2056#3262..3770#3947..4107#4236..4313#4467..4548#4646..4872#ATGGCGTTTAGGCGGATTCGAGGCGACGAACAAGAGGAGGATAGGGATGATGGTGGGTGGCCTGAGGCCAAGAGGAAGAGACAGACGGTGCCATCTTTCATATCGTTAGTTCCGATCTCTGAATCTGCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATGCACTGTGGAGCCCTTGCATGACAAGTGATGGCCATGGCTTGATCATGTGGAAAAACTACACTTCAGTGTGGGACCAAACGAACTAAGTTCAGCACAACCTGATTAATTAGATCTCCAATTGTTTGTGATTTTCCCTAATCATGGAGAAGGCACAAATCTGTACATATTGACACCACTTTTTTTGCAGCAACATGCTGTTTCTTTTTCCCTGTGCACTAAGATACCATGATATGGTGATAGTATGATATAAAGTACCTTTTTTCTATTTTGGACTGGATAGATATGTAATACTACTCTCCATGCATGATAAATTATAATGCTGCGTATAGATAGTTAGTAATCTTTACTACCAACAGAGAAATTGGTGAGGTTTTTTTGCTAACTAGAAATTGGTGAGGTTAATCCTCTGTTAATGCAAGCAGTTGAAATAACTACAGTCGATTTGCAGTCATACACTGTTATACTACAAAAGAAGTTTTTTTTATTAAAAAAATAATACATCACTACATCAGTGACAAAAGTATTCATATATTTGAAATTAGCCTGAATTTTGCACAGACGAACGCTGGCTCGATCGAATGGGGATCGCCTAACTTAAGTTGGGCCGTCTGCGGGAGTTCTAGCCCACGTGCACCCGGGCCCACGGCTACGAGCGTGCAGGAAGTAGCCGCAGAGCAAACAATTAGTACCATACTACTTAGCTAACATGGTTAGGCGTAGCTTATATACGCTGCTGTGCATAAAATAGAAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGTTGACACGCACAAATCGAGAAATGGTCCAAGTATTTTTGCGATTTCACGGATTGGTCCCTGCCCAGTCTGTTTCCAACTTTTTTTTCTCTCAGATATGCCCCTGCGGTCTCCTTTCTATATCCTCACACTTTCTTGATTCTCACAACCAGGTCCATGGACATTTTCAGCCATGCCCATTCTTGACTTGTAACTTTGCAGTCATGCCCTTGTAAACTTGCATTTTGGACCCTAAATCACTGTCAACTGCTCCATCACTGTGTGAACAGCTCGCTCTACGTGCTGTTTTTGTGGGTTAACTATTTGATTATGTGCAGTTATGGGGTTCCATGCAAACTACTCGTATAGGCCAATCAAGTTTGCTCAAGCTATAACGTTATTATCAGTAAAAAAAGAAGGAAATATTTTTTTTGTTGGTTTACCTTACTCCAAAGTCTGTTCCAAAAAAATGACACTCAGAGAATTGTAGTGATGGCATTGATGCCTCTAACAACATATTAAAAAAAATACTGTGCATACAAGCCTTCGCATATATACCCCGTGCAACCAGACTAACGAATATCACAAAAAAAATATTATATCTATGTGTCAGTTACATCTTCAAATTCATCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCCGAAAAGATTCAGAAACTCGGCCTGGATCTGGAACCATTTTTTCGGAAGGCGGTACGATACGAAAAATTCAGATTCGAATTCATGAAGTATTAATTCCTTTTATGTGGAAGCACAAAGATAGTATAGCTCAAATGCCTTCACAAAAATACTATCAATTCAGGCCAACTTTACTCCAAACAGTCCATCTAATCATCCACCAACTTATTCTTTCTTTGAAAATAGAAAAAAAACACTTTATTTTGTTCAATCAAATATATAAAACTCGTGTCATTTGTGTTAATTCATCATCTTAATTGCTAGGTTTTTTCTGCACTTCCTTTGAGTCTAAACTGACTTGAACATTGTCCTACCAATTTAAAGGTTCAGGAGGAACTGGAAAGAAGCCTTTCTAAACATGGACACCTACTGTACAGGTACAAACAAACTTCTTCCACTCACATATCTAACATACTATTATGATCTTATAACTCAACTTATTTTCTACTCTCTTAGTCCCAAATATAAGAATCTATAAACGAATGAGATATTTCCTAGTACTACAAATTTGAACAAACAACTGTCTAGATTCGTAGTACTAGGAAATGTCCCATTCAATTTTAGATTCTTATATTTTGGGACAGATGGAGTAGTACTTTGTAAATTTTTGTCCCATTTCTTTTTATTATTCATGGCCAGAAACAACATCTTCATGTAGAGGCTGGATTGATTTCCATTATCAAAAACAAAAGGAAAAAGTACGAATTACCTCCTCCGGAACTATCACGGTCGTCCGAATTACCCCCCTAAACCATAAAACCGGACATTCTTCGCCCCCCAACTATGCAAACCGGACGAATTACCCCCCTCGACCCAATCTGCGGCGGTTTTGGTCTACGTAGCGTACGCGTGGCAGTCCAGTCAGCAATTTATTTATTAGAAAATAGGTGGGCCCCACCTGTCATACCCTTTTCCTCTCTCTTCTCTTACTCTTCCTCTCTCTCTCTCTTCTCTCACTCTCTCACGAATGACAGCGGCAGGCGGGGCGCGGCGAGCGGCGGCGGCGGCGAGCGGCAGCGGCGGCGAGGGATGACGGCGCAGACGGAGGCGGCGGAGGAGGCGAGCGGCGGCGAGGTGCGGCGGAGGAGGCGAGCGCGGCGGAGGCGAGGCGAGGCGGCGGAGGAGGAGGCGAGCAGCGGGGAATGAGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGCATCTCCGCCACGAGAGAGAGACCGAGAGAGATAGAGGGGGTATGACATGTGGGTCCCACCATTTTTTAAAAAAATAAAATGATGACTGGACTGCCACGTAGACCAAAACCACCGCGGATTGGATCGAGGGGGATAATTCGTCCGGTTTGCATAATTGAAGATGAAAAATATCCGGTTTTATGGTTTAGGGGGTAATTCGGACGACCGTGATAGTTCGGGGGGGTAATTCGTACTTTTTCCAAAACAAAACCCAAACATACTATGCACCAACAAGTTTAATTTTTTCTCTCCACATATGAACTTCTTCTGCATATCTTGATCTCCAGATCTCCTCCAATGCTTGTCAACTCCGTCGATTCTTCGCTGAAGCTCGCCTTCGCGAAGCGGCTCCAGCTCCCAATCTTCACCAACAACAAGCTCGTCGACGTCGACAACAACCCTCTCCAAGTCCACCTCCTTCACATGAGCTCCACCACCACCTCTCATCATCATCTCCCCATGATCAAGAAGCTGGAGGTGCTAGTCCTGGATGGAGATTTCAGTCATGGTGATGAGGGATGGAGCAGCGACGAGTTCAGCGGCGCCATCGTGAGGGAGAGGGAAGGCAGGAGGCCACTGCTCGTCGGCACGCTCAATGTGGCCATGGCCGATGATCATCTTGGCGTTGCATTCATTGATGACGTGGCGTTCACCGACAACTCGAGCTGGACCAGGAGCAGGAGGTTCAGGATCGGCGTGCGCGCCGTGGCGGTGGCGGGTAGCGGCGATGGCGGCGGGCTGAGGATCCGGGAGGCGGTGAGCGAGAGCTTCATGGTGAAAGATCACCGGGGAGAATGTGGGTATCAAAGCTACTCTGAATTTGTCTTTGTGTTAGCAATGTTGTTGTTGTTGATGACGATGATGATGTCAGTTTCGTCAGAGTTTGATGAACTTTGATTATTAATTCGACAGTTTATTCTGAATTTGATTATTAGTATTTGAATTTTTTTTTCTTTATGCTTGATTTCACAGCGTACAAGAAGCATTTCCCTCCGAGGCCAGATGATGAGGTGTGGAGGCTGAAGAACATACGGAAAGATGGGCCAATCCACAAGAGGCTGGAATCTGAACGTGTCAGGAATGTGCAGGGTTTTCTGAACCTGCATGCCACCAACCCTGAAAAGCTCAGGAAGGTAATTAGTAAATGTAGTTAGTCTGCACTAATCAATTTGTGCATCGTTTTGTATCTCTTGAATTATGGAAGATTTCGTTGTTGTGTTGATGGATCATTGGTTGATTCGATCCGGGATTGTTCATTCAGCTCGTTGTCATGTCCGATCGGCTCTGGAAGGCAACACTGCACCACGCGAAAACATGCGATTTTAGAGCTGCAGAAATGGTAATAAATCGTAGTACTACTATTCTGCTTCTTTCTTCACAAGTTGTTTGGTCAGAATATACTTCATCTTGTTGTCGATCGATGGTTTATCGACATAAATGAATGCAATTAGCTTTTATCTGCCAAGTCATTTGATCTCATTATTTGTTCCAGATGCAAGTGAAGCAATCTTCAATCGAGGCATACCAGAATTGGGATCAGCTGGACGAAGCTGAGACTAACAAGACAGCCTCAGGTGCAGAAAATGGCCAGATGAAGCACCTGCATGATTAACCTTGGAAGTTCAGTAATTAACCCTCATCCCTAATCTAACCTTTTATTCCATCTTGTAGGCAATCTTGGTCAGGCACATGAAGGATCACTACAGGCAGATGAGATAGGCACCGTATCAGGGCCTCATTTCCAGAGCAGAAACCAGATGGATTCTGAAGATTCATTGTCTGCTGCTGCTGTAACTGAAGATGCAGATGATGCACTGTGGAGCCCTTGCATGACAAGTGATGGCCATGGCTTGATCATGTGGAAAAACAACACTTCAGTGTGGGACCAAACGAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030488