BGIOSGA030502

From RiceWiki
Revision as of 09:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030502| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030502, complete gene.| tag = OsI_308...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030502

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030502, complete gene.

LocusTag

OsI_30861

Ensembl Transcript ID

BGIOSGA030502-TA

Ensembl Protein ID

BGIOSGA030502-PA

Length

1083

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8009003..8010085

Sequence Coding Region

8009003..8009520,8009606..8009955,8010036..8010085

Genome Context

<gbrowseImage1> name=IndicaChromosome09:8009003..8010085 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:8009003..8010085 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGAGCAACGGAGAGCAACCTCCAGAATCGCCGAAGGAAGCAAATGCTGCACCTGTAGCAGCCAAGCTTGCCATGGCGTCAGGGCGCGATGGATGTGAGAGGCTCAAGGATCTGGTGAGTAGGGAAGACGATGCTACTACGATGGTTGTGGCCATGGCGACAAGCAAGAACGTGGACGACACAAGACGACCTCCCCCTCCCCGTGTAATTATGGATCCCCAGCTCCTCATGGCTGCACGGAATGGAGCTTGCCAGTCTCTTGAGAGCCTTCTCCTCGGCCATGAGGTGCGTTGTCAAACCTTGCCTGAATCCCATCTAATCATCTACTTGCCCGAACCAGATGAGGGAGCTCCGACTACAGATCCAATTGAAGATCAGGCTGAAGGAATCTCTGCGACTGATCAGCAAGCCTCTGGTGCTGTATATTCGCTCTCGCTCCTGGAGGGACTGACTCTTGACTCGGACGAGAACTCCGCGCTGCATGTGGTGGCAGCCTCCGGTGACAGCCAGGCCTGGGAACCACTCCTCGCGCTGGCTGCTGCTGCGCCTGCGCGTGACAGCAGCGGTGCAGCGAGGGTGGATGACCAGGAGCTCCTAGCAAGGAGGAAGAACAAGGTCGGTGAGACGGCTTTGCACGCGGCGGTCCGTGCTGTCCACAGCAAAGTGGTGGAGGTCCTCATGAAGGAGGATCCGGGACTGGCCGGCGTTGATCGGCACGACGGCACGTCACCGCTGTACCTTGCCGTTTCGTTGGGACGCTTTGAGATTGCGTGGGATCTGCTTGATATGAGCTCTAGGAAATTATCTTACTCCGGACCAGATGGTCAGAATGTCTTGCACGTCGCAGTACAACACCCCCAAGATCAATTAAATCCAACTCATTATATATTCAACAATGCACAGCACCGTTAA</cdnaseq>

Protein Sequence

<aaseq>MASSNGEQPPESPKEANAAPVAAKLAMASGRDGCERLKDLVSREDDATTMVVAMATSKNVDDTRRPPPPRVIMDPQLLMAARNGACQSLESLLLGHEVRCQTLPESHLIIYLPEPDEGAPTTDPIEDQAEGISATDQQASGAVYSLSLLEGLTLDSDENSALHVVAASGDSQAWEPLLALAAAAPARDSSGAARVDDQELLARRKNKVGETALHAAVRAVHSKVVEVLMKEDPGLAGVDRHDGTSPLYLAVSLGRFEIAWDLLDMSSRKLSYSGPDGQNVLHVAVQHPQDQLNPTHYIFNNAQHR</aaseq>

Gene Sequence

<dnaseqindica>1..518#604..953#1034..1083#ATGGCGTCGAGCAACGGAGAGCAACCTCCAGAATCGCCGAAGGAAGCAAATGCTGCACCTGTAGCAGCCAAGCTTGCCATGGCGTCAGGGCGCGATGGATGTGAGAGGCTCAAGGATCTGGTGAGTAGGGAAGACGATGCTACTACGATGGTTGTGGCCATGGCGACAAGCAAGAACGTGGACGACACAAGACGACCTCCCCCTCCCCGTGTAATTATGGATCCCCAGCTCCTCATGGCTGCACGGAATGGAGCTTGCCAGTCTCTTGAGAGCCTTCTCCTCGGCCATGAGGTGCGTTGTCAAACCTTGCCTGAATCCCATCTAATCATCTACTTGCCCGAACCAGATGAGGGAGCTCCGACTACAGATCCAATTGAAGATCAGGCTGAAGGAATCTCTGCGACTGATCAGCAAGCCTCTGGTGCTGTATATTCGCTCTCGCTCCTGGAGGGACTGACTCTTGACTCGGACGAGAACTCCGCGCTGCATGTGGTGGCAGCCTCCGGTGACAGCCAGGCGTATGTGGAGTGTACGACCAGGCGAGGCACCTACTCGGCGCGGCCAACAACAACGGCGACACGCCCCTGCACTGCGCCGCTGCAGCTGGGAACCACTCCTCGCGCTGGCTGCTGCTGCGCCTGCGCGTGACAGCAGCGGTGCAGCGAGGGTGGATGACCAGGAGCTCCTAGCAAGGAGGAAGAACAAGGTCGGTGAGACGGCTTTGCACGCGGCGGTCCGTGCTGTCCACAGCAAAGTGGTGGAGGTCCTCATGAAGGAGGATCCGGGACTGGCCGGCGTTGATCGGCACGACGGCACGTCACCGCTGTACCTTGCCGTTTCGTTGGGACGCTTTGAGATTGCGTGGGATCTGCTTGATATGAGCTCTAGGAAATTATCTTACTCCGGACCAGATGGTCAGAATGTCTTGCACGTCGCAGTACAACACCCCCAAGGTATGCGCCACATTAACGTACTCTCTTTGTTGCCCTTCCATTACATCAGTAATAACAAAATAATTATGTTGTTTTAAAAGATCAATTAAATCCAACTCATTATATATTCAACAATGCACAGCACCGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030502