Os10g0556200

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0556200| Description = Similar to SPATULA| Version = NM_001071885.1 GI:115483365 GeneID:4349351| Length = 2197 bp| Definition = Oryza sati...")
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Gene Name

Os10g0556200

Description

Similar to SPATULA

Version

NM_001071885.1 GI:115483365 GeneID:4349351

Length

2197 bp

Definition

Oryza sativa Japonica Group Os10g0556200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22318682..22320878

Sequence Coding Region

22318682..22318786,22318883..22319254,22319769..22319834,22320846..22320878

Expression

GEO Profiles:Os10g0556200

Genome Context

<gbrowseImage1> name=NC_008403:22318682..22320878 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22318682..22320878 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagttaaggtttgtgcgaaagaataatcacaaacgacgggacaggatcaaccaaaagatgaaaacattgcagaagctcgttcccaattcaagcaagactgacaaggcgtcgatgcttgacgaggtgatcgactacctgaagcagctgcaggcgcaggtgcaggtgatgagccggatgggcagcatgatgatgcccatgggcatggccatgccacagctgcagatgtccgtcatggcccagatggcccagatggctcagatcggcctcagcatgatgaacatgggccaggccggcggatacgcgcccatgcatatgcacacgccccctttcctccccgtctcctgggacgccgccgcatcctcctcctccgccgccgccgccgaccgaccgccgcagcccaccggcgccgccacctccgacgccttctccgccttcctcgcctcccaagcggcgcagcaaaacgcacagcaaccgaacggcatggaggcgtacaaccggatgatggcaatgtaccagaagctaaaccaccagcagcagcagcagcaggaccagccaagcaactccagacaatga</cdnaseq>

Protein Sequence

<aaseq>MKLRFVRKNNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVI DYLKQLQAQVQVMSRMGSMMMPMGMAMPQLQMSVMAQMAQMAQIGLSMMNMGQAGGYA PMHMHTPPFLPVSWDAAASSSSAAAADRPPQPTGAATSDAFSAFLASQAAQQNAQQPN GMEAYNRMMAMYQKLNHQQQQQQDQPSNSRQ</aaseq>

Gene Sequence

<dnaseqindica>2093..2197#1625..1996#1045..1110#1..33#atgaagttaaggtttgtgcgaaagaataatcacgtaagcatggatgtccacatgattctactacctagataatgagttttcttggctaaatttgctccaagtatccactctactgttttgagccaccaaccaacacttctgtacttttcccctggagatgtcatgcattgagctccttttttttttcctttttttgtgattgtcggaactgagaatctggtccaagcatccacaactgatttaagaatttcattttcttttgtgggaaaaaggtcactactagctagtacatgccaactagttctcttttttgtttttttagaccaatgatatcctagacagcagccagttgaaaactcaacgtttgttaattagtatcacaagctataggatacgttttagatagctatcacaattcattgatatcttttttggcctcgccttgatggaaggttcgtcaatattgcaactttctgaggatgccaatatcactttcagttccaagctgatgtgtatgtcgccatgcatatgcttacctgactcttgtgagttttgaagcatatgtttacttaactgaaattgattaggtcccgtttgaattaggagtagctaatggattacaaaaactgaatttatgaaaattatttaagggcacagacgaatgaattgcatataaaaaatagaaagtattttttaaagaaaaaaatattgatgaacaaagtttttaatgaaatcagagcttgggaactgtgcccgtgatagtctcatttgccggttgcagttccgaacaggaccggatggattaaaaatttaagcttcttttaactagtcatcaggactaaaaatgaccagcttgttgctatgaagtatgaacagaacacaaccgcccgtgggtaaaaattgtttgcccatccatgggctaaaaactccatttctctctcaaaagacttttttttggaaaaaaaataaatctagaatattactattacgatgtttgctaatttcgactaactaaaaaatcatttggtctactgttgattgcagaaacgacgggacaggatcaaccaaaagatgaaaacattgcagaagctcgttcccaattcaagcaaggtgagacgacgacagcaaacaaacctaaatccacgtacattggtaaaaaaaaataaacgggagaaaatatatataaatacaaaaagaaacttagaagctttataaacactgacgtgtcataccttgattggattcttgaaaattttcaacttttaactatttaaatcaaacggttgacatcgttattagctggagttttgtaaaaattaatttagcacgtactatatcactccaacaaatatatgtatatatatgtatatatatatgtatatatatatatgtatatatgtatatatatatgtatatatgtatatatatatgtatatatgtatatgtgtatatgtgtatatatgtatatgtgtatatatgtatatatatgtatatatatgtatatatgtatatatatatatgtatatatatatgtatatatatatatatatatagacacacacacatcaccatttatatcaactaaattttgacggttcgtgtaaaccgtggtgcgtttatccagactgacaaggcgtcgatgcttgacgaggtgatcgactacctgaagcagctgcaggcgcaggtgcaggtgatgagccggatgggcagcatgatgatgcccatgggcatggccatgccacagctgcagatgtccgtcatggcccagatggcccagatggctcagatcggcctcagcatgatgaacatgggccaggccggcggatacgcgcccatgcatatgcacacgccccctttcctccccgtctcctgggacgccgccgcatcctcctcctccgccgccgccgccgaccgaccgccgcagcccaccggcgccgccacctccgacgccttctccgccttcctcgcctcccaagcggcgcagcaaaacgcacaggtaaatgtagtactccagtagaatcgttcttgcattttgccatcatctcaacctgaacttggaacctgacgaattgcttggcacaaatgtgtgcagcaaccgaacggcatggaggcgtacaaccggatgatggcaatgtaccagaagctaaaccaccagcagcagcagcagcaggaccagccaagcaactccagacaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0556200, RefSeq:Os10g0556200