BGIOSGA030579

From RiceWiki
Revision as of 09:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030579| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030579, complete gene.| tag = OsI_310...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030579

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030579, complete gene.

LocusTag

OsI_31025

Ensembl Transcript ID

BGIOSGA030579-TA

Ensembl Protein ID

BGIOSGA030579-PA

Length

2693

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9806661..9809353

Sequence Coding Region

9806661..9806903,9808455..9808699,9808789..9809353

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9806661..9809353 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9806661..9809353 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACAGGGACATCATCGCGCAGGACGCAGCCATGGCATTCGCGGATCACCACCTGCACATCCCGGACAGGTTCGTCCGCGCCGACGAGGTCCCGGCGGCCGGCGAAGTCGTCGTCGTGGGCGGCGACGACGAGAGCAGCGAGCTGCCGGTGGTCGACATGGCGAGGCTGCTCGATCCTGAGCACAGGGAGGAGGAGATCGCTTGGCTTGGCTCTGCGTGCCGGAGCTGGGGATTCTTCCAGCTCATAAACCATGGAGTCGACCAAGCAGTGATACAGAAAATGAAAGAAAACACGGTACAATTCTTCGAGCTACCCCTGGAGGACAAGAACACGGTGGCTGTCCGTCCTGGCGGCATAGAAGGATTCGGCCATCACTTCAGATCATCAGCTGGCAAATTGGACTGGGCGGAGAACTTGATCGTTCAAACGCAGCCATTCCAGCAGAGAAACCTCGATTTTTGGCCTAGTAACCCACCCACATTTAGGGATTCAATCGACAAGTACACAACGGAGATGTCGAATCTGGCAATGCGACTGCTAAGGTTTATGGCCAGCGACCTTGGTGTTGAGCAAGAACCGCTGCTCGCCGCCTTCCGCGGGAAGCGGCAGAGCACTGCCCTCCACCACTACCCTCCTTGCCGCCACCCGGAGAAGGTGATCGGCATCGCGCCGCACTCCGACGGCTTCGGGCTGACTCTGCTGCTGCAAGTCGATGACACGCCGGGCCTGCAGGTTAGCAACGGCGGCCGGTGGCATCCGGTGCGGCCACTGCCAGTGCCAGGTGCCTTCGTCATCAACATCGGCGAGAGCCTCGAGGTCCTCACCAATGGCCTCTACACGAGCGTGTTCCACAGGGTGGTCGTCGACGCTGAGAGGGACCGGGTTACAGTTGCGGTGTTTCAGGACGCGTGTATCGATGGAGTGTTGAAGCCACTGCCGGAGCTCGGCGAGCCGCGATATCACGCGATCGGCAAGTCGGAGTATTTCAAGGGCCACACAACCGAAGTAGTTGGTCAGGGGGAAAGGTTCATCGACACCCTTAAGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MNRDIIAQDAAMAFADHHLHIPDRFVRADEVPAAGEVVVVGGDDESSELPVVDMARLLDPEHREEEIAWLGSACRSWGFFQLINHGVDQAVIQKMKENTVQFFELPLEDKNTVAVRPGGIEGFGHHFRSSAGKLDWAENLIVQTQPFQQRNLDFWPSNPPTFRDSIDKYTTEMSNLAMRLLRFMASDLGVEQEPLLAAFRGKRQSTALHHYPPCRHPEKVIGIAPHSDGFGLTLLLQVDDTPGLQVSNGGRWHPVRPLPVPGAFVINIGESLEVLTNGLYTSVFHRVVVDAERDRVTVAVFQDACIDGVLKPLPELGEPRYHAIGKSEYFKGHTTEVVGQGERFIDTLKK</aaseq>

Gene Sequence

<dnaseqindica>1..243#1795..2039#2129..2693#ATGAACAGGGACATCATCGCGCAGGACGCAGCCATGGCATTCGCGGATCACCACCTGCACATCCCGGACAGGTTCGTCCGCGCCGACGAGGTCCCGGCGGCCGGCGAAGTCGTCGTCGTGGGCGGCGACGACGAGAGCAGCGAGCTGCCGGTGGTCGACATGGCGAGGCTGCTCGATCCTGAGCACAGGGAGGAGGAGATCGCTTGGCTTGGCTCTGCGTGCCGGAGCTGGGGATTCTTCCAGGTTAATTAATTAGCAAACACACACTTACGAGATAGAAATTTTCATAATTTTCCAAAGCCAATTATGAAGGAAGCATCAACTTTGACTATTTTGGAAAATTCCCAGCCTTACAGTTTCTTCGTTTTGAGTTAGAGCGAGACTCCGACGCTTTCTACTGGTAGTAGAATTAATCTAAGCCGTTGATATTTTTCAATCTAATGGACCTGATCTAATTATACTTCCACGTCAATTAAGGGTAGTAGAAAAGTGGAAGGGCATAATAGTCCATCGCAAAATGGAGTGGAGGGATAATATTGTAACTTCGCACATAACGGCGGTCACCACGCATCCATTCCCCTATCAATCCATCTGCCCACGGACTGCTGCAGCTGGCTCCCTCCTCCCCGACGGCGCGCTCAGTAGCTATCGGAATTCGGAAGCGCGGTGACAGCGCGACATGGACAGGGGACGGGCTGGGGTCGTCGCGCCCGACCAGCAGCTTATGGAATGACTACTAGCAGGTCTATGGCTTCAGAGCAATTACAGTATGGATATGGAAGAGAAATCGTGAGTGCTACTGCTTATACGTTAAATTTGGCTGTTTAGATCTTCCTGAATGGATCGATCTAACACTTATTTATGTGCATGCACCATCACGTTACTTGCAAACAGCTTTTCGACAGATTTATCTGCTATTACGCGAGTTCATAATTTTTCAGTTTTCAAGGTAGCAGACTAGCAGTTGTCTAATGAATGCCTGCGTGAAATGGGTTTCAGTACCTGCTGGAAAGCAACCAGTCGCACATTGCATAGTATTGCTGTGTGGTCCAAACAGAGAGTACAAAGCGCTGCCGGCAATTTTTGCCGCGCCGCCACCTGCCGGGAGGAGTCGCGATAAGTAACATGCGAGATGCAGTTCCTGCGTCGGGCCTGATGCAATTAAGCGACTGAGACAGAGAAATCAGCCCCTAGCCAAAATTACTCCTAATCTGTACTAGGAGATTACTAATCTACCCTTTAAAATAAACGGTCAGGATTAATTCTACTCGTAGTATAATACTACAAGTAGAAAGCACCGGAACGTCCCCCGGGGTGCACCAAAAGAGTATACAAAGGTTTTTTTTCCCCTCTTAATTTGATTTAGGACTTTCTGAAATTTCTTGTTGGAATTTATTTATTTTAAATAAAGATGAGTACACACTAGTAAAAGTACGATTTATGGTGGTGCAATTCCTAATATACAACTTCGTTCAACGAGTTTAAAATATTTTGGAAAAGTTCATCGCCTTAACTTGTTTAAAATTTTTTGAAAAGTCACGAATTATTCCAGCGTTGAGCCATTTCACCATGTCAACACTGACAGAAAAGCACGCTAAATTTGTGCCACGATTAAAAGGTGGGTATGATTTTAGACTTTTAGTAGGTGAGGGATGAATAATGTTAATTTGGTTTTCATGTTTTTGACATATTTATACTTACATAAAATTCAAAGCTATGAAACACACTTTTCCTGAATTTTAAATCCGATGTAAACATACTTCTTGACAAAAGTATCATGCGACTTTTCTACAGCTCATAAACCATGGAGTCGACCAAGCAGTGATACAGAAAATGAAAGAAAACACGGTACAATTCTTCGAGCTACCCCTGGAGGACAAGAACACGGTGGCTGTCCGTCCTGGCGGCATAGAAGGATTCGGCCATCACTTCAGATCATCAGCTGGCAAATTGGACTGGGCGGAGAACTTGATCGTTCAAACGCAGCCATTCCAGCAGAGAAACCTCGATTTTTGGCCTAGTAACCCACCCACATTTAGGTCCCTCTTCCATTCTTGTTTATTAATTCTTTCCAGATCAATTTAGTTTCGTAAATTCTTCTGTCCCTCATCTACCATGGATCATTCAGGGATTCAATCGACAAGTACACAACGGAGATGTCGAATCTGGCAATGCGACTGCTAAGGTTTATGGCCAGCGACCTTGGTGTTGAGCAAGAACCGCTGCTCGCCGCCTTCCGCGGGAAGCGGCAGAGCACTGCCCTCCACCACTACCCTCCTTGCCGCCACCCGGAGAAGGTGATCGGCATCGCGCCGCACTCCGACGGCTTCGGGCTGACTCTGCTGCTGCAAGTCGATGACACGCCGGGCCTGCAGGTTAGCAACGGCGGCCGGTGGCATCCGGTGCGGCCACTGCCAGTGCCAGGTGCCTTCGTCATCAACATCGGCGAGAGCCTCGAGGTCCTCACCAATGGCCTCTACACGAGCGTGTTCCACAGGGTGGTCGTCGACGCTGAGAGGGACCGGGTTACAGTTGCGGTGTTTCAGGACGCGTGTATCGATGGAGTGTTGAAGCCACTGCCGGAGCTCGGCGAGCCGCGATATCACGCGATCGGCAAGTCGGAGTATTTCAAGGGCCACACAACCGAAGTAGTTGGTCAGGGGGAAAGGTTCATCGACACCCTTAAGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030579