BGIOSGA030582

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Revision as of 09:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030582| Description = BGIOSGA030582| Definition = Oryza sativa Indica Group BGIOSGA030582, complete gene.| tag = | tid = BGIOSGA030582-TA|...")
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Gene Name

BGIOSGA030582

Description

BGIOSGA030582

Definition

Oryza sativa Indica Group BGIOSGA030582, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA030582-TA

Ensembl Protein ID

BGIOSGA030582-PA

Length

1676

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9885899..9887574

Sequence Coding Region

9885899..9885965,9886291..9886816,9887565..9887574

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9885899..9887574 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9885899..9887574 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCTTGCTTTTCTTCGCCGCATTCGCGTTATCCGCTGCAACTCATGCCGTCGGCCAGCCAGAGCCAAACTACAGCGGCTACACGGACACCATCCACGGCATCTTCTACGTCTCAGACGGCTCGTACGTNGACGCCGGGGAGAACCACGGGGTGGCTGCTGACAAAGAGAGCGGCCGTATACGCCCTGACTTGACCGTCCGGAGCTTCCCCTCTGGCGTGCGCAACTGCTACGCGCTTCCCACGAACGCCGGGAACAAGTACCTGGTCCGGGTGGTGGCCTTCTACGGCAACTACGACGGCAAGAACAGTTCATCGTCGTTGCAGTTCGACCTGCACCTCGGGTCAAACTACTGGGACACCGTGCAGGCCGGTAGTACTAAGCAAGTGTACGAGGCATTGTTCGTGGCGTGGGCCAGCTGGGCGCCGGTGTGCCTCATCAACACCGGTCAAGGTACGCCGTTCGTGTCATCGGTGGAGCTGAGGATGCTAGGCAGCGAGCTCTACCCGCATGTTATGACCAACCAATCCATGCGCCTACATTTCCGGGACATTTTGGGGCCAACAACCGTTTCCAGATCTGTTGCTCGGTTTGACTGA</cdnaseq>

Protein Sequence

<aaseq>MALLLFFAAFALSAATHAVGQPEPNYSGYTDTIHGIFYVSDGSYVDAGENHGVAADKESGRIRPDLTVRSFPSGVRNCYALPTNAGNKYLVRVVAFYGNYDGKNSSSSLQFDLHLGSNYWDTVQAGSTKQVYEALFVAWASWAPVCLINTGQGTPFVSSVELRMLGSELYPHVMTNQSMRLHFRDILGPTTVSRSVARFD</aaseq>

Gene Sequence

<dnaseqindica>1..67#393..918#1667..1676#ATGGCGCTCTTGCTTTTCTTCGCCGCATTCGCGTTATCCGCTGCAACTCATGCCGTCGGCCAGCCAGGTTTGCAAGATGTTGATTTTTGCAAGAGCTTGATTTTTCACCCCATGCAAGTGCAATCGACGGCGTGTTAATTAGTTTGTTAATCTCTGTATAACATATCAAAGTGATGATGAGATACTTAATTATTATCGGGTCCATGCATGAGATTTTGTAGGTTTGTTAACACGACTTTCTCGTTTCTTTGATTTGTGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGGTTTCCTGAGCATTGACTGTGGCCTAGAGCCAAACTACAGCGGCTACACGGACACCATCCACGGCATCTTCTACGTCTCAGACGGCTCGTACGTNGACGCCGGGGAGAACCACGGGGTGGCTGCTGACAAAGAGAGCGGCCGTATACGCCCTGACTTGACCGTCCGGAGCTTCCCCTCTGGCGTGCGCAACTGCTACGCGCTTCCCACGAACGCCGGGAACAAGTACCTGGTCCGGGTGGTGGCCTTCTACGGCAACTACGACGGCAAGAACAGTTCATCGTCGTTGCAGTTCGACCTGCACCTCGGGTCAAACTACTGGGACACCGTGCAGGCCGGTAGTACTAAGCAAGTGTACGAGGCATTGTTCGTGGCGTGGGCCAGCTGGGCGCCGGTGTGCCTCATCAACACCGGTCAAGGTACGCCGTTCGTGTCATCGGTGGAGCTGAGGATGCTAGGCAGCGAGCTCTACCCGCATGTTATGACCAACCAATCCATGCGCCTACATTTCCGGGACATTTTGGGGCCAACAACCGTTTCCAGATCTGTTGCTCGGTATGTATATTTGTGTCGTCGTCCTTTCTCCTTGGAAAGCATATTTTTAAGGGGATGTCTCCTATATGTTTTTTCATCTCACTTAAACAACATAGATCATTGCATTATATATCATTTTATAAACAATCATTTTAAAATTTGATCTATACAAATTAGAACAAAAGAACAAATCTAAATCTACACAGCAGTTTTACTACATCGACTTTAATTTGTTATTTTTGTGAGATGATAGATGACCACTAATATCAATTCATACATCAATTTTATTTAGATTTTTTAAAATTATTTTGTTGAGTGGTTTAAACAAACTAGTAGGATATATGCCTTTTAAGGATCGATTAAAAAAACCAGCTTTATTGCTAACTTCTGGTCGGTAACTCATGCATTCGGTATAAGTGGGCTATTGTGACGTTATACAGTTTTTGTTTTTGTTCTGATTTCTTTTTTTTTTTTTGGCAAAAGCTAGCATGTCTTTAATTCATGCATTTATCTCTGTTTGAAATTATACATATATGTAAACAACTATATACAGATTATTTTTAAACACATATTCATTTACTAAACAAATAAGAGCACTACCTAGTTGCATCCTAACATTATATTACCGCAGCTAACTACTATATATTTGCGAAAAAGTAAAAATTATAACTATATAGGAAAGTATTTTGAAGAAATTAAATATACTACTATCATTTTCTCATATTAAATCTTAATATTTCAGTGTATATTTTTTATTCAAAATTTCAAGGTTTGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030582