BGIOSGA030599

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Revision as of 09:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030599| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030599, complete gene.| tag = OJ1506_...")
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Gene Name

BGIOSGA030599

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030599, complete gene.

LocusTag

OJ1506_A04.14

Ensembl Transcript ID

BGIOSGA030599-TA

Ensembl Protein ID

BGIOSGA030599-PA

Length

3533

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10287688..10291220

Sequence Coding Region

10287688..10289861,10290629..10291220

Genome Context

<gbrowseImage1> name=IndicaChromosome09:10287688..10291220 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:10287688..10291220 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGTTCTGAATCCTCCACCCAAAAGAAGGGCGATCTCAGCCATACGCAAATTTCCACGTGACTGTGGGAGGGCTGCTTCTACTCTTGCGGAAAGTGGTGCCTCTATGGAGGAGTTGCCTTTAGAAGCAACACCTATTAGTGTAGCTACCGGTGGTGCCTCTATGGAGGATTCCTTGGCGAGAACCCCTATTTCAGTCCAGGGTGCTTCTTTGGTGTGCGGTCTAGACCATTCTAGTGAGGCAATAGATGGCAAGACAATTGAAGATGATGAATCTAGCAAGGTAGAAAATAGGATCCAAGAGTTCCAAGTTGCCACAAATGTTGCCCTAGATGATTTTGAAGGAGCCAAGAATGGTAGTACACACCCAAATGATTCTATTGCCAAACCTTCTCCTAGCCATGGTTTTGTTGAGAGGGTGAATGGAAAGGGATCACAACAAGAAAAGAAGCTTGTAGCACGAAGTGCTTGGGATGGCAAGATGGTAAGCAAATATGAAGAGAGATTACAAAAAGGTACTCCCGAGACTCGTATGAGAGATCTTGTCGATGTAAAGGCAAAAAAGAAGATATTAAAGAGTGATAAGATGAATGGGGCATTGCAAAATGACGCTAGATCCTCTGGAGATGGTAAGATGAAAACGAAGGCTTCAAGCACTCAGAGAGGTGTGGTGCGCTCGGATATGAGCTTGAAGCAAGGTGATATTGCTCGTAAGGTTGATGCCACAGGCAAATGCAAGGGCGGCGTGAATAGCCTCATAAAGGAGGCTACATCTAGGAAGCATGCTACGACTAATGGAATTGAAGAAAATGATGATAGAGACCTTGTCAGTGACAGGATAATTGTACAAGCACTAATGGCCCCAGACAAATGCCCGTGGACACGAAGAAGGAAGTCTATTGGTGGTTCCTCCGAGTCTCGTACTCCTAAGCTTAAGAAAAAGTTTGGTAGGCCAAGGAAAGAATTGAAAGATACTACTCCAAGGGAAGAAGTTTCCCCGGAAGTTGCCTCTTGTAAAGCGATCAAGCATGAGGCCATAGAGGACAAGGAGGATTCTTACTTTGAGGATGAAGGCAACTCTAAGGCTTCTTACTCGGATGGTGAAGGCAACTCTAAGGAGCTAGTGCGTGGAGGAAAGGCACTAGTTGTTTGTGGAGGAAAGAAGGAGTTATGTGTTACACTCCCTCCTTCGGCTCCTTCTGGCACAGATCCCCGAAGCAAAATAAGGAATTTACTCATAAAATTCCATGCAGCATGCCGAAAGCTTGTGCAAGTTGAGGAACAACATAAAGGTAATATTGGAAGAATTGACATCGAGGCTGGTAAAGCCCTAAAACAAAACGGTTTTATTAAGCCCGGACCTATTGTTGGCAATGTTGCGGGAGTTGAAGTTGGAGATGAGTTTAATTTTAGAATCGAATTGTCATTTGTTGGACTCCATCGCCCATATCAAGGAGGTATTGACAGTACAAAGGTGAATGGAATCCTCGTTGCTATAAGTATTGTTGCTTCCGGAGGTTATCATGATGAATTGTCTAGCTCCGATGAACTCATATATACGGGTTCTGGAGGAAAGGCCATCGGGAATAAGGCAGCTGGAGATCAAAAGCTTGAGCGTGGTAATCTAGCTTTGAAGAATTCTATTGAAACTAAGACTCCGGTCCGAGTGATTCATGGATTCAAAGGTCATAGTAAAGGTGAAGCTAGCCATTCTAAATCCAAGCAAATCTCAACATATATTTATGATGGGCTGTACATGGTGGTGGATTATTGGAAAGAAGGCCCAGAGGGCTCGATGGTCTACAAGTACAAGTTGCAAAGGATCCCAGGTCAACCCGAGTTAGCATTACACATAATCAAGGCAACGAGGAAGTCCAAAGTTCGCGAAGGTGTTTGTGTGCCTGATATATCTCAAGGAAGGGAGAGGATTCCCATACCTGCGATCAACACAATTGACGATACGCAGCCAACAGCATTTAAGTACACTACGGAAGTCATATATCCACATTCCTATGCAAAAGAACCTCCGAAAGGCTGTGATTGCACGAATGGTTGCTCAGACTCTAATAGATGTGCCTGTGCAGTGAAGAATGGAGGTGAAATCCCTTTCAATTCCAATGGTGCTATTGTTGAGGCAAAACCTCTCGTATATGAGTGTGGCCCATCATGCAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAAATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGTAAGATCTCTGAGCTCTATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGATGAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTTTGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACGGAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCAAAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAAAATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACGATTACAATTACGGTAAAGTCGAGGATAAGAATGGCAAGGAGAAGGTTAAACCTTGCTTCTGTGGTTCGCCTGATTGCTCTCGCAGGCTGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MSVLNPPPKRRAISAIRKFPRDCGRAASTLAESGASMEELPLEATPISVATGGASMEDSLARTPISVQGASLVCGLDHSSEAIDGKTIEDDESSKVENRIQEFQVATNVALDDFEGAKNGSTHPNDSIAKPSPSHGFVERVNGKGSQQEKKLVARSAWDGKMVSKYEERLQKGTPETRMRDLVDVKAKKKILKSDKMNGALQNDARSSGDGKMKTKASSTQRGVVRSDMSLKQGDIARKVDATGKCKGGVNSLIKEATSRKHATTNGIEENDDRDLVSDRIIVQALMAPDKCPWTRRRKSIGGSSESRTPKLKKKFGRPRKELKDTTPREEVSPEVASCKAIKHEAIEDKEDSYFEDEGNSKASYSDGEGNSKELVRGGKALVVCGGKKELCVTLPPSAPSGTDPRSKIRNLLIKFHAACRKLVQVEEQHKGNIGRIDIEAGKALKQNGFIKPGPIVGNVAGVEVGDEFNFRIELSFVGLHRPYQGGIDSTKVNGILVAISIVASGGYHDELSSSDELIYTGSGGKAIGNKAAGDQKLERGNLALKNSIETKTPVRVIHGFKGHSKGEASHSKSKQISTYIYDGLYMVVDYWKEGPEGSMVYKYKLQRIPGQPELALHIIKATRKSKVREGVCVPDISQGRERIPIPAINTIDDTQPTAFKYTTEVIYPHSYAKEPPKGCDCTNGCSDSNRCACAVKNGGEIPFNSNGAIVEAKPLVYECGPSCRCPPTCHNRVSQHGIKIPLEIFKTGNKGWGVRSLSSISSGSFVCEYAGEVLQENGDEHVETDEYLFDIGHHYHDEVWEDPKFEGILGLESSTSKTTEDTEGSKTTEDTEGSTIDASKCSNVGRFINHSCSPNLYAQNVLWDHDDMKKPHIMFFATENIPPLQELTYDYNYGKVEDKNGKEKVKPCFCGSPDCSRRLY</aaseq>

Gene Sequence

<dnaseqindica>1..2174#2942..3533#ATGTCAGTTCTGAATCCTCCACCCAAAAGAAGGGCGATCTCAGCCATACGCAAATTTCCACGTGACTGTGGGAGGGCTGCTTCTACTCTTGCGGAAAGTGGTGCCTCTATGGAGGAGTTGCCTTTAGAAGCAACACCTATTAGTGTAGCTACCGGTGGTGCCTCTATGGAGGATTCCTTGGCGAGAACCCCTATTTCAGTCCAGGGTGCTTCTTTGGTGTGCGGTCTAGACCATTCTAGTGAGGCAATAGATGGCAAGACAATTGAAGATGATGAATCTAGCAAGGTAGAAAATAGGATCCAAGAGTTCCAAGTTGCCACAAATGTTGCCCTAGATGATTTTGAAGGAGCCAAGAATGGTAGTACACACCCAAATGATTCTATTGCCAAACCTTCTCCTAGCCATGGTTTTGTTGAGAGGGTGAATGGAAAGGGATCACAACAAGAAAAGAAGCTTGTAGCACGAAGTGCTTGGGATGGCAAGATGGTAAGCAAATATGAAGAGAGATTACAAAAAGGTACTCCCGAGACTCGTATGAGAGATCTTGTCGATGTAAAGGCAAAAAAGAAGATATTAAAGAGTGATAAGATGAATGGGGCATTGCAAAATGACGCTAGATCCTCTGGAGATGGTAAGATGAAAACGAAGGCTTCAAGCACTCAGAGAGGTGTGGTGCGCTCGGATATGAGCTTGAAGCAAGGTGATATTGCTCGTAAGGTTGATGCCACAGGCAAATGCAAGGGCGGCGTGAATAGCCTCATAAAGGAGGCTACATCTAGGAAGCATGCTACGACTAATGGAATTGAAGAAAATGATGATAGAGACCTTGTCAGTGACAGGATAATTGTACAAGCACTAATGGCCCCAGACAAATGCCCGTGGACACGAAGAAGGAAGTCTATTGGTGGTTCCTCCGAGTCTCGTACTCCTAAGCTTAAGAAAAAGTTTGGTAGGCCAAGGAAAGAATTGAAAGATACTACTCCAAGGGAAGAAGTTTCCCCGGAAGTTGCCTCTTGTAAAGCGATCAAGCATGAGGCCATAGAGGACAAGGAGGATTCTTACTTTGAGGATGAAGGCAACTCTAAGGCTTCTTACTCGGATGGTGAAGGCAACTCTAAGGAGCTAGTGCGTGGAGGAAAGGCACTAGTTGTTTGTGGAGGAAAGAAGGAGTTATGTGTTACACTCCCTCCTTCGGCTCCTTCTGGCACAGATCCCCGAAGCAAAATAAGGAATTTACTCATAAAATTCCATGCAGCATGCCGAAAGCTTGTGCAAGTTGAGGAACAACATAAAGGTAATATTGGAAGAATTGACATCGAGGCTGGTAAAGCCCTAAAACAAAACGGTTTTATTAAGCCCGGACCTATTGTTGGCAATGTTGCGGGAGTTGAAGTTGGAGATGAGTTTAATTTTAGAATCGAATTGTCATTTGTTGGACTCCATCGCCCATATCAAGGAGGTATTGACAGTACAAAGGTGAATGGAATCCTCGTTGCTATAAGTATTGTTGCTTCCGGAGGTTATCATGATGAATTGTCTAGCTCCGATGAACTCATATATACGGGTTCTGGAGGAAAGGCCATCGGGAATAAGGCAGCTGGAGATCAAAAGCTTGAGCGTGGTAATCTAGCTTTGAAGAATTCTATTGAAACTAAGACTCCGGTCCGAGTGATTCATGGATTCAAAGGTCATAGTAAAGGTGAAGCTAGCCATTCTAAATCCAAGCAAATCTCAACATATATTTATGATGGGCTGTACATGGTGGTGGATTATTGGAAAGAAGGCCCAGAGGGCTCGATGGTCTACAAGTACAAGTTGCAAAGGATCCCAGGTCAACCCGAGTTAGCATTACACATAATCAAGGCAACGAGGAAGTCCAAAGTTCGCGAAGGTGTTTGTGTGCCTGATATATCTCAAGGAAGGGAGAGGATTCCCATACCTGCGATCAACACAATTGACGATACGCAGCCAACAGCATTTAAGTACACTACGGAAGTCATATATCCACATTCCTATGCAAAAGAACCTCCGAAAGGCTGTGATTGCACGAATGGTTGCTCAGACTCTAATAGATGTGCCTGTGCAGTGAAGAATGGAGGTGAAATCCCTTTCAATTCCAATGGTGCTATTGTTGAGGCAAAACCTCTCGTATATGAGTGTGGCCCATCATGCAGGTATGACGTGCAAAAGCTTAGCAATCCAAAATAATAACAATAACTAAATAGGAGTAACATTTGCATCATATTCTGATAATACCAAAGTAGATTCACAGAACCAGGAAATATTTCTCATTGCTTCTGAAATTTTTACCCTTTCAACAAGGGCTGACATTTGGTTGCAGATTCATTTGTCAGTGAAACACCCTGCAACACACAAGGAACATAAAATTGTTGGTGGCATAGTTTAAAATTTCTCATAAAACCAACCATTTTCACCTTAAGTCTGTAGGTTTTCACACCAGAACTATTCATTTACAGCAGATCATTAGGTTGAAGGGAATAATAAAATATATTCTCAATCAGAGAGCTAGACATATTATCATAACAGCGAAATTGGTTCATTCACCTTAAATTGGTAGGTTTGCATATCAGAACTACTCATTCACATTGCACAATTAGGTTAATTTGAAACTACAAGTTCTGTTCCGATGCTTTGAGCTAACTAATGCTAATATGCATTGCTTGCCTGAAGTTAATTGTTTTTCGCGCCAGAGTTATTATTAGATTAAACCCAAATTGTAAATTCTGTTTGAAAGCTGTGAAATACCAAATGCTCAAACCAACATATTGATTACAGAAGCAACCAATTCACGTCAAGTTAATTAGTTTTTACAATAGAATTTATTTGTTTGTATTGGAATATCAAGTTAAACCGGAAGTAGAAGTTCTGTTCTAAAGCAGGGAGCTAATCTAGCTAATCTAATGTTCAAAACTATGTGCAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAAATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGTAAGATCTCTGAGCTCTATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGATGAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTTTGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACGGAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCAAAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAAAATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACGATTACAATTACGGTAAAGTCGAGGATAAGAATGGCAAGGAGAAGGTTAAACCTTGCTTCTGTGGTTCGCCTGATTGCTCTCGCAGGCTGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030599