BGIOSGA030610

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Revision as of 09:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030610| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030610, complete gene.| tag = OJ1001_...")
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Gene Name

BGIOSGA030610

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030610, complete gene.

LocusTag

OJ1001_G09.33-1

Ensembl Transcript ID

BGIOSGA030610-TA

Ensembl Protein ID

BGIOSGA030610-PA

Length

8170

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10396068..10404237

Sequence Coding Region

10396068..10396233,10403542..10403645,10403788..10403844,10403929..10404237

Genome Context

<gbrowseImage1> name=IndicaChromosome09:10396068..10404237 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:10396068..10404237 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGGCACCATGGATTACCTGTCTGATCTTCTCGGCGGCGGCGGGAGCAGCAGCCGTCGGAGGTACAAGAAGAGGAAGCAGTTCCAGACGGTGGAGCTCAAGGTGAGGATGGACTGCGACGGCTGCGAGCTCAAAGTCAGGAACGCCCTCTCCAGCATGAAAGAGCTCTTCCGTACTGAAGGTGTTGCTAGTGATTCATATCTCTGGCCCATTTGGTTCGACCAAAGTTCCAAACTGTCTTTTGCATGGAGTGAAGACAGGCATTATGATAGGCAACAGAGTGCTTTGCTAATTGCTATGGACCGGCAAGTCAGGGGTGACCATGAAGGGATCAACGTTGTTGGGTTTGAAGTGCCAACATCACCAGATTCAAGCTACAACAACCCTGTTCCTGGAAATGAGGATGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCATCTGCAGCATACATTATTGAGCTTCCCACCAAGCCAAGATGATTCAAGCAGCCTTCCTCCACCTCAAAACGTGGTACTCAACCACCTCTACATAGAGAAAGAGAACTCTAGATCCGTCGTCGCCCTGGGGATTACCCATCGGTTCAGGGCAAAGTTTGTGACTGTTGTGCTGTACAAGCCCGTACAAAGGCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MGGTMDYLSDLLGGGGSSSRRRYKKRKQFQTVELKVRMDCDGCELKVRNALSSMKELFRTEGVASDSYLWPIWFDQSSKLSFAWSEDRHYDRQQSALLIAMDRQVRGDHEGINVVGFEVPTSPDSSYNNPVPGNEDEAREPPLVPPHLQHTLLSFPPSQDDSSSLPPPQNVVLNHLYIEKENSRSVVALGITHRFRAKFVTVVLYKPVQRR</aaseq>

Gene Sequence

<dnaseqindica>1..166#7475..7578#7721..7777#7862..8170#ATGGGAGGCACCATGGATTACCTGTCTGATCTTCTCGGCGGCGGCGGGAGCAGCAGCCGTCGGAGGTACAAGAAGAGGAAGCAGTTCCAGACGGTGGAGCTCAAGGTGAGGATGGACTGCGACGGCTGCGAGCTCAAAGTCAGGAACGCCCTCTCCAGCATGAAAGGTATAAACACAACCAAGATCTCTCTCAACTCTCACTAGAAAGATCAATTTCTACAGTTCTTGGAATCATTTCATTCATGGCTGAACTGAAATGATGCCATTCTGTGAACAATTCTGGTTAATACGCACAAACATACGACCAAAAATATCTCTGAAATCATGCCAGAAAAATCAAATTTCTACTGCATGAAAGGTATAAACACAATCAAACACACCACCAAAATCTCCCTGAATTCATGCCACAAACATCAATTTCTACAGTTCTTGGAACCATTCATCATGCATGGCCGAACTGAAATGATGGCATTACTTAATCTCTGTGAAATGATTTTGGTTAATACACACAAACATACGACCAAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCATAGATTTCAGGGTCTTCATAGATTTCAGAATCTTCAGCTGTAATTGTGACAAATTAGATTTAACAGCATAGATAGATATGCACACAGTTAATTTGCTTATACAATGCATTTTTACCCCCATTTTTATATTACCTTCAGTGATAGCGTTCGATTCTGGTCCAGCATACAGTGAAGCCTCTAAGTTCAACAAAAAGGACTTAATTCGCACTCCATTTGATGTCCCATACTTTAGTTTCAGATGCTTAGACTTTGGAATAGATTCAATGCTCTGTGCAAATCCACAGATGTAGTAATCTTTGTTGACTGCATCAAACCTGTACGTCCGTGCATTGCAAAAGAATGATACTAGCCTCTCCATTATTTCTGGGTGGTTAGCATGCTCAGGAACATTCTTAATCTTGATTTCAACGTTTGTTGTCCATTCTTTACTACCCGTGCCATACTCATCGCACCACTCCATGTCAGCTCCAACAACTAAAGCGTTTTCCATCCTATTGATAATGCTGCTCAGACAAATATGCAACATGTCAATGCATAGTGCATTCGAAACAAGCAGCTCATCAACAAATTAATAACCAATCATATTAAAAAATAATACTTATAGTCGATTAAACCTTGGCTATGCATCACTGAAAAGGCCACTGTTAAACGCAGCCTTTAAAAATACATCTCCATCTTGCTAAATATTAATAGGCATTGTTCTCTAATATAAATTTTCACATTTCTAGCAGGGTAAAGAAGATGTAAACTATAAACTATACAGGGTTGTATGCAATCTGTATACAAATAAGCAGCCTATTATTCCAACCAATATTTTCGAGACAAAATCTTATAGATCTAGCCTTGTTTTTGTCAACCAAAAAAAATGCACACCTTTTCCTAAAAATACTAAATAACATCCTAAAGTCCAACCTTCTGTATCACTTAATGCTAGGTTTCTACTGTAACCAACCCACGAATCGCCCAGGCTTTAGAGACAAATAAAAACCACTTGTTATAAATTTGCTTTTCTCCACTGAAAACACACGATTCGTTGCTATTGAGCCTAACCCAAAACAAGTTAATCAAACACCATACACAATTTTAGACACATAAAAAAAAACATTGGGCTCAGCGACGGCACAGGACATAGCAATCCCCACGCACTGTGCTAACCTGCCTTATCCCCTTACCTTCTCCCGCTCGCCGCTCCTCCCACCGCTTCCTCCGTGCTCACCGCAAGCGCATCAACACCCACAAGAACAAAAGCCCTCCACATCTGCACAAATGAAGAGAGCAAACCTTGGTCGCCGCTTTGCGTCACAGCTTATCTAACCTAACAAAGCAAAGCTGTAAGCAGCTCGCCCTGTGTGAAAACGTTCATAAAGATACACTACAGCAAAGCAAAAGTCTAAAAAGCCCATAGCTCTGTTTTCTACACGTGTCAAGTCACACAAAGCCCATACTATTCTATCCTGTCTTGCTCCCGGCAGTGCGCCACCGGCGCGCGTCCCCCCTAGTCTATCTAAAAGGTGGAAAGAATCGTGGAGCCACCTTCCTAACTTGCAAGCTCACTCTTCTAAAGCAAGATTCTCTTCTTTAGAAAACAGATTTCATGTTGCACTCTATGACACTGACATATGGGACTAAAGAAAAGTGCCGTCCACGTATCGGTTACACTTAATACATACTACATACCGTAGAGGATGTGTATTATATCCCACCCTTTCAATTTGAATAATTAGACTAGCGCCTATAATACTCACTCTTATCTAGAACAAGTAGTGGTAGAATGCTTAAGATAAAAATCTAAACAGTAACTCACTAGTAAATACGGAGTATAAAAGTATCAAGACATGGTATATGAAAAATGACGCCAACAGATATTTTTTATGAAAATACTTTCATCTAGTTATACTTTAATTATAAAACATCCTCAAAAGAAACCGATGTCATACACTCATACCTTGTTGTATTAGAACATCGGCTACATGCACGAGAGCTAGGGAAAATAACGAGAGAACCAAAGGTTGACCGCATAGTGATAGTGATGAAGTGAAAAGACATCGTTGATCATGAGTCAGTGTCGATAATACCAAAAGTAAAACCCGTGAAAACAAAATAAATAAATAAATATAGTAATCACTAAAAGGTAATCGTTTACCAGTTATGTCACTTCTTTTTCTACCGTATTTACACTAAAATTTCTATACGAATATTTTATTCTAATCAATCTATCAATCATCAATAGTTCTAAAGCTGGCACTGGAACTGCAAGCCTATATTGGTCCAAGTGACAGTGCTATACTTTGTAAGATAAATCTATAAATTATACTCCCTCCGTTTCACAATATAAGTCATTCTAGCATTTCCCATATTCATATTCTCCGTTTCACAATATAAGTCATTCTAGCATTTCCCATATTCATATTCTATCTAGATTCATTAAAATCAATATGAATATGGGAAATACTTGAATGATTTATATTGTGAAACGGAGGAAATATAAGAGATAAAAATTAGAGAAAAGAAAGCACCTCTAGCTTCTCGATTGGGCAGAGTAATGGACACCTTGAAATTAGAGAAATTTGCCCTCTTCCAATTGATGATAATTGTAATGATTAAAGAAAAAAATTTAGAGATGAAAAAATATTATATTTAAAATTTAAAATTTGTATGTTAGTAAATTAACTCTAAATAGAACACACGGGTTACGCAATGCTCACACCAACAGAAACAACTTTAAAAAATACCGTGATTGTGATTACGTACCCTTTATTTAATTAATTATGTTCAAAACGACAACGGTTTTATTTAGAAAAAGTCTTGCATTTCGACTCAAAACTAGGTCACACATTAGGATAATAAATCCACCAATTATTTAGTTGGTTAGTCTTCTTTATTAAAAATGATTTTATCTCTCTTTGATGACTAATATTCAACATTTGTTATTGTAGTATCACTTTCTTATATTCATTATTTGATACGAGAAAATAAACTTATTTGGCCATCTACAATACCGAAATGTAAAAAATTAATTAAACAACATAAACGGGATATAAAATACAGGCGTGCCAATTGACGCACTGATTTTCTAATGTTTCAAATAAATATTGGGTCTATTTGGCTGCAACAAGCCAGCTGTTGCTTAGTTCCTGCAGGTAAAGAACTAGAGTCCGGCTTCGCGGAACATGCCTACTAAGATTATGTACTATAAAACATCTAAGTATAAACCCCTAGATGATACTCCTACCTAAGCTTGAATGGTAAGGTGGAGGAGAGAAGAGAGAGGATGAGCCACCCCTCATGCAAGAGAGAGGGTGTGTTCGGACTATTGATACAGCCAACAGCAGCCCAACAGCTGTAATATGTAGCTTAATCGAACACAGCCATACTCTTTTCACAAACTTTAAGGAAGAAATGGAAAATAGTGATGTTGATCAAAGTTGTCAGTATCCTGATTTATATCTTAGTATTCTGTGATACTACAATCCTATCAAGCTGAAACAATATCGATCCTATGTAGTATCCTAATTTTCATAGTATCTCAATCTTATTATTCATTTTTATACGATCATACAAAATTTTAGGTAGTAGCCCGATACTACGATCCTTGTGAACCTACCAAATATTATTTAAAATAAGACGGATTGAAAATAATACTGAAGTTTACATAAAACCAATTAAATTTATCAGAATTGATATTATATGCTTTAATTTATACAAAATATTATATATTTTATATAAAAGTTATGTATAGTAATACCGATACTATGATACTATAAATCAAAGAAACAATCCTACCTACTATCTTGATACTTATTATCTTATTATCTTGATGTTGATTGGATGAGAGCGAATAAAATAAATACTTATGTATTGGGGTTAGTAAATTAGAGGCAATGCGTAGCATAAATTGCTTTCCAATTAATTAATTGATAATGTGAATAATATTAGATGTAGCAATCACCTCTACCGTAAACTTGCGCTCTTATGTTGTGACTTGCGAGCTTAACTCATGCTGAGTTCAGGAGGTGGAGTTAGGAACTCCATCTTCTCGCAAAAAACGGTATTACTTATTAATAATACGTAATTAATTAAGTATTAACAAAAATACTTAATAAAAGATTAATACGATTATTTTAGCGATCTTTCTATAAAATATTTTTAGAAAATATACCGTTTAGTAATTTAAAAAATATACGTGGTTAAAAAAAGAGAGGTGGGTTTGAAAAGAAAGAGAAGAACACAGACTTAACACTAACCGAAAAGCCTCACCTTACCTGAGCTTAAGCTTAAATACCACTCTTTGTAATAAACGACGGTAAATCGGATGGAAGTACCCAAGCCACCCCCAATTCTCCTCGTCGTCGTCGTCCTCCTCCGCCTCCTCACCACGCGCGACGCCCGCCGCCAACCAGGTGAGCTCACCACTCCCCCCGCCGCCGCCCGCCGCCGCCATCCATCCTCCCTTCCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCTGACAAACCCTAGATCGCCGCCCCGCCGCCGTGCTCTCCTCCTCGTGCCTCCCCTATGGCCGCCGCCGGACTCCGCCGCTTCGGTAGTGGTCGTCTTCTCATCTGCCGCCCCCCCGAACCGAACCCTAGCTCTCCGCCGCCCTACCCTAGGTCTCCGCAGCAGCAGCTGCTGCTCCTCCTCTACCAGAAATCCCCGCTATCGGCCGCCCCCATGCCGCGCCTCCTTCCCCCTTTCCTCGCTCGCTCTGTGATTTCGCTTTCCGAAATGGAGCCTCTGTGTGTGCGGCAAGCTCACTTTTATCTGTTGATTTAGTTTTGGTCGCAGGTGGCTGAGGAATCAGTCTTCCGGTGGCCTTCGCGTGGTTTGCTTCATCAATCTCTCCATCCTAAGGTGAGTTGAAGACTAGTCCCACCTGATTATTTGTGGCTTTTGATGATCAATCTGGGTAGTTGGGAAATGTAGCTGCTGGAATTGTAGTTACTGAGATGGACATGAGCAGTTTTCTTCTGTGCGGATTTGCGTGTACTTCAATTTGCTCTGAAATGCTTGAAGAACTATGTGATTTAGCTTATTTTAGATCTGTACCTATTATTAGATGCTACACTTTACATGGAAGGAAGACTATCTCGTGCTATTTTTATGCTTGGGATTTATAGTTGGCTGTGGTGGAGTACTTGAATTTTTGAGTTATTTGTGTTCTTATCATATACAAAATATACAGATTAAGATCCAATTTCCTAACGATAACTGCATGTCACAACTAAACCTGTACATATTTGTCAATATGCTCACATACACCAATTCAAGGGCCCTATCCCACACGTCACGTCGTAATAAATGAATTCCATGCAGTGATCCCGCCAAAATCTTTACCCATAGTTCCCAAACTAAATAACGTGTTGCCTAACGTTATTATCCATATCCCGCAAACAAAATGACACTTTCCTATATTCTGTCTTCTTCCCACGCTTACCAGTTACCCCTAGACTTGGAAGAAAGGCATCACTAACCGTACCAAAGCTCTAACCTCTGCTTCATCACTAAACTCCAAAACTCAGGATTCAGAGCAAGCTAAGCCTCAAGTTCACTCCATATCAGCCCATTTTTATGCAAGAGGCCTATGCAGCTATCATGCACAGCCAAGGATGGTATTGATGAATTACGTTCATGGGGTGCCAGCAAAAGGAAATGAATAAATGGAAGGGCGCATTTAATAAACACATAGCAAAACCAGATTTACCAAACTAGATCAAAGTCAAATGAATAAAAGCAAATTAGGGATTCCGTACCAATAACAGACATCAGTTTTCGGTATCTCTTCACACTGATCTCGCTTAGGAGAGGAGGAGAGTAGTTTGAGAAGGCAGATTGTTATGGCATAAGGCAGGCATGCACTGCTGTGAACATTGATGATTCAGGCAGCAGTGTTGAATTTGAGGGAGGGGATATGATGGAAGAGATATAAGAACATGTTGGGGATCACCAGATGAGGTTGATTGAATTCTTGCTTATTTCCTCCTCTGCATTGGAACTGGATCAATTTACAAGGGAACTTTGTTTATCCTTGATTTCTTACCATGTATAGGAAATGATTTCTCTTTATGAGGCCCCTAACAATGGAAAATTAAAGGATTGTCTAAATGCTCCCAACAGATATGCTTGGATGCAACTACACAACATAGTCCTTTAGCAATCATCTACGCTGCTGGCCCTGCCATTTATGCACCACCTCATGGGCCATAGCATGACATTCTGCTACTGACTTTTTGTATAGTCACTGCATATGAAGTTTTCCTTAGTGCATAAATTTCTATATATTAATCACCACTTAAGAACCGTGGATCATGTAAGCTTTATTCAACTACCTCCGTCCCAAAATATAACAACTTCCGGCTATGAATCTAGACAAGCACATGCCCAGATTCATAGCTAAAAATGCTTAAATTTGGGGATGGAGGGTAATACTTAAGCATGGTCCCTGGATTTTGGATTAGTGGGCTCTTACGGTCTACCATGATGATGTACTGATTACTATGTCTCTGTTTATCCATTAAATTTTGGCTACTTCATTTCTTTTTTTTTGTTTCAAATACTTGTATGTGCTGATAAGGCTTTACTTCAATTTATTATGTCATTTTTTAGCAACAACTAGATTTTCATCTTTTGTCTGTATTAGTTCAGTTTAAGTGGTGACTGTTAATTACAAAGCGAGTTGCTTCTCTTGGTTATGTGTATTTGAACGAAAAATTTAGCTAGTATAATCTTTTTCTGAGGGAGCAGTTTTGGGTTGAAATTGGTCATTGAGAAAACATTGCAACTGTTTGAAACTTTGAATTCAATTTTACTTTCTCCTTTCTGATGACACCAAATGCTGTAGAGCTCTTCCGTACTGAAGGTGTTGCTAGTGATTCATATCTCTGGCCCATTTGGTTCGACCAAAGTTCCAAACTGTCTTTTGCATGGAGTGAAGACAGGCATTATGTAAATTTGATGTGATGTTTATTAAAGAGTATATGATTCTTATAAGAAATTAATGTTTGCTCTTAATTTTATTTTCAACTTCCAAGTGTACACAGATTATTCTGATTCTTTACTCACTTGAGTATTTTTTTCTTCAAACCAGGATAGGCAACAGAGTGCTTTGCTAATTGCTATGGACCGGCAAGTCAGGGGTGACCATGTAAGATATATTGGAATGTGTTCCTATGTTCTTTAAAGAGAGTCTTGATTGCATTCATTGTTATGATGGATTTCAATGATGTAGGAAGGGATCAACGTTGTTGGGTTTGAAGTGCCAACATCACCAGATTCAAGCTACAACAACCCTGTTCCTGGAAATGAGGATGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCATCTGCAGCATACATTATTGAGCTTCCCACCAAGCCAAGATGATTCAAGCAGCCTTCCTCCACCTCAAAACGTGGTACTCAACCACCTCTACATAGAGAAAGAGAACTCTAGATCCGTCGTCGCCCTGGGGATTACCCATCGGTTCAGGGCAAAGTTTGTGACTGTTGTGCTGTACAAGCCCGTACAAAGGCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030610