Os10g0557900

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0557900| Description = Peptidase M10A and M12B, matrixin and adamalysin family protein| Version = NM_001071893.2 GI:297610913 GeneID:4349359...")
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Gene Name

Os10g0557900

Description

Peptidase M10A and M12B, matrixin and adamalysin family protein

Version

NM_001071893.2 GI:297610913 GeneID:4349359

Length

1410 bp

Definition

Oryza sativa Japonica Group Os10g0557900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22410695..22412104

Sequence Coding Region

22410963..22412030

Expression

GEO Profiles:Os10g0557900

Genome Context

<gbrowseImage1> name=NC_008403:22410695..22412104 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22410695..22412104 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcctatgtcgccgcgcggctgccgcgtcgtgcctggtcgccgccgtggcgatggtggtggtgctcgggctccccgtggtgcacgggcacggcggcgtggcgtggcactcgttcaagcagctgctcgacgcggggcgagggagccatgtcacggggctcgcggagctgaagcggtacctggcgaggttcgggtacatggcgaagccggggcgtgacacgacggacgccttcgacgagcacctcgaggtcgccgtgaggaggtaccagacgaggttcagcctgccggtcaccggccggctcgacaacgccacgctcgatcagatcatgtcgccgcgctgcggcgtcggggatgacgatgtggagcgccccgtgtccgtcgcgctctcgccgggggcgcagggcggcgtggtcagccggttcacgttcttcaagggcgagccgcgatggacgcggtcggacccgccgatcgtgctgtcctacgccgtctcgccgacggccaccgtcggctacctgccgccggccgccgtgcgtgccgtgttccagcgcgcgttcgcgcggtgggcgcggacgatccccgtgggcttcgtcgagacggacgactacgaggcggccgacatcaaggtgggcttctacgccggcaaccacggcgacggcgtgccgttcgacgggccgctcggcatcctcggccacgccttctccccaaagaacgggcggctccacctcgacgcgtcggagcactgggcggtggacttcgacgtcgacgcgacggcgtcggccatcgacctggagtccgtggcgacgcacgagatcggccatgtcctggggctcggccactcggcgtcgccgcgcgccgtcatgtacccgagcatcaagccgcgggagaagaaggtgcgcctcaccgtggacgacgtcgagggcgtgcaggcgttgtacggctccaacccacagttcagcctcagctcgctctccgagcagggcacgtccagctcgtcgccgcggcgcttgcttgctggatcagctaggctgctttgtacagtcttggtcatacttgtgacgcaattgtag</cdnaseq>

Protein Sequence

<aaseq>MFLCRRAAAASCLVAAVAMVVVLGLPVVHGHGGVAWHSFKQLLD AGRGSHVTGLAELKRYLARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLD NATLDQIMSPRCGVGDDDVERPVSVALSPGAQGGVVSRFTFFKGEPRWTRSDPPIVLS YAVSPTATVGYLPPAAVRAVFQRAFARWARTIPVGFVETDDYEAADIKVGFYAGNHGD GVPFDGPLGILGHAFSPKNGRLHLDASEHWAVDFDVDATASAIDLESVATHEIGHVLG LGHSASPRAVMYPSIKPREKKVRLTVDDVEGVQALYGSNPQFSLSSLSEQGTSSSSPR RLLAGSARLLCTVLVILVTQL</aaseq>

Gene Sequence

<dnaseqindica>75..1142#gagcccccacgataacgagaataacggccacaccggccgcctcgccctcgccacgccacgccgcgcgcgctctcatgttcctatgtcgccgcgcggctgccgcgtcgtgcctggtcgccgccgtggcgatggtggtggtgctcgggctccccgtggtgcacgggcacggcggcgtggcgtggcactcgttcaagcagctgctcgacgcggggcgagggagccatgtcacggggctcgcggagctgaagcggtacctggcgaggttcgggtacatggcgaagccggggcgtgacacgacggacgccttcgacgagcacctcgaggtcgccgtgaggaggtaccagacgaggttcagcctgccggtcaccggccggctcgacaacgccacgctcgatcagatcatgtcgccgcgctgcggcgtcggggatgacgatgtggagcgccccgtgtccgtcgcgctctcgccgggggcgcagggcggcgtggtcagccggttcacgttcttcaagggcgagccgcgatggacgcggtcggacccgccgatcgtgctgtcctacgccgtctcgccgacggccaccgtcggctacctgccgccggccgccgtgcgtgccgtgttccagcgcgcgttcgcgcggtgggcgcggacgatccccgtgggcttcgtcgagacggacgactacgaggcggccgacatcaaggtgggcttctacgccggcaaccacggcgacggcgtgccgttcgacgggccgctcggcatcctcggccacgccttctccccaaagaacgggcggctccacctcgacgcgtcggagcactgggcggtggacttcgacgtcgacgcgacggcgtcggccatcgacctggagtccgtggcgacgcacgagatcggccatgtcctggggctcggccactcggcgtcgccgcgcgccgtcatgtacccgagcatcaagccgcgggagaagaaggtgcgcctcaccgtggacgacgtcgagggcgtgcaggcgttgtacggctccaacccacagttcagcctcagctcgctctccgagcagggcacgtccagctcgtcgccgcggcgcttgcttgctggatcagctaggctgctttgtacagtcttggtcatacttgtgacgcaattgtagatgatagacatgtttttataggcaacaaaaagatttgattggattagaaagaaaaaaaaagtgttatgctgtgcagcgtgattccatagaagaggaaatgtctcttctagtgtgatagcacaattgggtgtagataattcaaagaactgcttctcagtttctcttcttacaatatatataggccttttagcagtcaaattaatacagaatatcctccagttactgtacatgatctactggtatcaagtgtaactatgacttctctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0557900, RefSeq:Os10g0557900