Os10g0558400

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0558400| Description = Isopenicillin N synthase family protein| Version = NM_001071895.2 GI:297610917 GeneID:4349361| Length = 1831 bp| De...")
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Gene Name

Os10g0558400

Description

Isopenicillin N synthase family protein

Version

NM_001071895.2 GI:297610917 GeneID:4349361

Length

1831 bp

Definition

Oryza sativa Japonica Group Os10g0558400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22434387..22436217

Sequence Coding Region

22434387..22434656,22435115..22435448,22435581..22435828,22435963..22436217

Expression

GEO Profiles:Os10g0558400

Genome Context

<gbrowseImage1> name=NC_008403:22434387..22436217 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22434387..22436217 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcatgcaagaagcacaggatctctgccggtggcaaatgttcaggcactcgcagagacctgcaacgatccagatcagcagatacctgagaggtacatcagagcagacgccaacgccgacgaggtcatcagcggcgacgactgcacggccgcaattcctaccgtcgatctcagcaagttgctcgatccattgtcgtcagacgaggagactgaaaagctggggtctgcctgtcagcaatggggattctttcagctgatcaaccatggcgtgtcagaggatgtgatccgcgacgcgaggaaagacatagccgagttcttcaggctgccaatggagaccaagaaggcgtactcgcagctgcccagtggcatcgagggatatggccaggcgttcgtggtgtcgcacgagcagaagctggactgggctgacatgttctacctcgttctccgccccggcgagtccaggaacatggccctctggcctgctcatcctccatccttcaggaattcgatagatcggtactcgtcggagacggcgagggtggcgagatgcctgttggagttcatggcgaaggacatgggcgtgaggccggggtcgctgctggagaggttccaggaccagccgcagggcatcaggatgaacgactacccgccgtgccgggaggccggcaaggtggtcggcctgtcgccgcacaccgacgccgcctgcctgacgctgctcctgcaggtgaacgacgtgccgggcctgcagatcaggagccccggcggcaggtggctcgccgtcggcgcccctccggacgacggcgcgttcatcgtcaacgtcggcgacatactcgagatcatgagcaacggcaagtaccggagcgtggagcacagggcggtggtgcggccggacagggagcgcgtgtcggcggcggtgttccaccagccgtgccaggacgcggtggtcgggcctctgccggagctggtcggggaaggcggcggcgataacgcgcggtacacgtcgatgggctacctggatttcatgaagcgttactactcggcaaagctcgacggaaggaatcacctcgacggcttgaggattaaactgtcatcttcgaagggttag</cdnaseq>

Protein Sequence

<aaseq>MAHARSTGSLPVANVQALAETCNDPDQQIPERYIRADANADEVI SGDDCTAAIPTVDLSKLLDPLSSDEETEKLGSACQQWGFFQLINHGVSEDVIRDARKD IAEFFRLPMETKKAYSQLPSGIEGYGQAFVVSHEQKLDWADMFYLVLRPGESRNMALW PAHPPSFRNSIDRYSSETARVARCLLEFMAKDMGVRPGSLLERFQDQPQGIRMNDYPP CREAGKVVGLSPHTDAACLTLLLQVNDVPGLQIRSPGGRWLAVGAPPDDGAFIVNVGD ILEIMSNGKYRSVEHRAVVRPDRERVSAAVFHQPCQDAVVGPLPELVGEGGGDNARYT SMGYLDFMKRYYSAKLDGRNHLDGLRIKLSSSKG</aaseq>

Gene Sequence

<dnaseqindica>1562..1831#770..1103#390..637#1..255#atggctcatgcaagaagcacaggatctctgccggtggcaaatgttcaggcactcgcagagacctgcaacgatccagatcagcagatacctgagaggtacatcagagcagacgccaacgccgacgaggtcatcagcggcgacgactgcacggccgcaattcctaccgtcgatctcagcaagttgctcgatccattgtcgtcagacgaggagactgaaaagctggggtctgcctgtcagcaatggggattctttcaggtatgcagatttcttggcagacagactgaatttgatcagacaagttttgaaacgtacgtacgtagtgagagatagcaaaagcgttgactcacgatatggatgaacatgaacatgaactggtgaactgcatgcagctgatcaaccatggcgtgtcagaggatgtgatccgcgacgcgaggaaagacatagccgagttcttcaggctgccaatggagaccaagaaggcgtactcgcagctgcccagtggcatcgagggatatggccaggcgttcgtggtgtcgcacgagcagaagctggactgggctgacatgttctacctcgttctccgccccggcgagtccaggaacatggccctctggcctgctcatcctccatccttcaggtgatcgatcgatcaagatcaaagtcaaactgcttatgataatcatcaaattaatcttctgcggttttgattgcgtgttgttgaaaaagagagagtaatcttggttcttggcgatcacttgcctgtgatcaggaattcgatagatcggtactcgtcggagacggcgagggtggcgagatgcctgttggagttcatggcgaaggacatgggcgtgaggccggggtcgctgctggagaggttccaggaccagccgcagggcatcaggatgaacgactacccgccgtgccgggaggccggcaaggtggtcggcctgtcgccgcacaccgacgccgcctgcctgacgctgctcctgcaggtgaacgacgtgccgggcctgcagatcaggagccccggcggcaggtggctcgccgtcggcgcccctccggacgacggcgcgttcatcgtcaacgtcggcgacatactcgaggttaccgactgaccaacaatggcgtcgaggcaaacatagccatcgccgaggatgatttcttggcttcatgtttgctttgctgctacgtgcgtctgcatgcagatcatcttcttagccggggtcatctgcattccttagccggggttgctgtttctggggatttcttaggagtgtagcgtggctctacgccttcccgctattagaagttgtgtttagcctccgtagttcttcctaagatttagtttcttattttatttttctttctttggcataagccggtctagttgattgtttttttaaaaaaaatcaagggcaagggttcctatttccattactagaaatgagcaaagttatatagttcaaatagtctagctgattgtgttatgtaacaaaaatttattttcttttaatatattgacatgcaatttttttacgcgtctcgcaaaaaatgcatgcagatcatgagcaacggcaagtaccggagcgtggagcacagggcggtggtgcggccggacagggagcgcgtgtcggcggcggtgttccaccagccgtgccaggacgcggtggtcgggcctctgccggagctggtcggggaaggcggcggcgataacgcgcggtacacgtcgatgggctacctggatttcatgaagcgttactactcggcaaagctcgacggaaggaatcacctcgacggcttgaggattaaactgtcatcttcgaagggttag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0558400, RefSeq:Os10g0558400