Os10g0558700

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0558700| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001071897.1 GI:115483389 GeneID:4349363| Length = 1930 ...")
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Gene Name

Os10g0558700

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001071897.1 GI:115483389 GeneID:4349363

Length

1930 bp

Definition

Oryza sativa Japonica Group Os10g0558700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22443919..22445848

Sequence Coding Region

22444143..22444388,22444630..22444954,22445041..22445288,22445516..22445770

Expression

GEO Profiles:Os10g0558700

Genome Context

<gbrowseImage1> name=NC_008403:22443919..22445848 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22443919..22445848 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggagcaagatccgttggttctctcccagtgcctaatgtgcaggcgcttgcagaaatttgcaatgatccagatgaacacatacctgaaaggtacatcagaccagaggctagttctgaggaggtcatcaacaactaccaaggtgacatggcgattccgatcatcgatctcaagaaattgctttgtccgcaatcatcagaagaggagtgtgtgaagctgagatctgcctgccagtattgggggttctttctgctcattaaccatggagtgccagatgaagtgattgcaaacctgaagagagacattgttgatttctttagccagccactggacaccaagaaggagtacacacagctaccgaatagcctagaaggctatggacagagctttgttttctctgaggaccagaaacttgactgggcagacatgctgtatcttcatgtccatcctagcgattcaagggacctaaggttctggcccacttctccagcatctttcaggcaatccattgatgcatactcatcagagactaaaagcctggcactctgcttgtttgagttcatggctaaggctgtgggcgctaagccagagtcacttttagatttatttgaagagcagcctcgaggcttaaggatggcctattacccaccatgccggcaagctgacaaggtgatgggcctttcgccacactctgatgcgggtggcctgacactgctgctcgagattaacaatgtgcagggcctgcagatcaagaaagatggcaagtggttctccatagatgctccaaatggtgcacttattgctaacattggcgacacacttgagatcctgagtaacggaaagttcagaagtgttgaacacagggccgtgataaacccaaataaagagcgaatttcagcagcactcttccactatccaagtgaaaatatggtgatcagccctctgccggagtttgtgaaagatggtaaagtgaagtacagatcaataagttaccttgatttcatgaaacaaatcttcacacaacagcttgatggaaaaaaccgagtggaggtattaaagctggaccagtag</cdnaseq>

Protein Sequence

<aaseq>MAGARSVGSLPVPNVQALAEICNDPDEHIPERYIRPEASSEEVI NNYQGDMAIPIIDLKKLLCPQSSEEECVKLRSACQYWGFFLLINHGVPDEVIANLKRD IVDFFSQPLDTKKEYTQLPNSLEGYGQSFVFSEDQKLDWADMLYLHVHPSDSRDLRFW PTSPASFRQSIDAYSSETKSLALCLFEFMAKAVGAKPESLLDLFEEQPRGLRMAYYPP CRQADKVMGLSPHSDAGGLTLLLEINNVQGLQIKKDGKWFSIDAPNGALIANIGDTLE ILSNGKFRSVEHRAVINPNKERISAALFHYPSENMVISPLPEFVKDGKVKYRSISYLD FMKQIFTQQLDGKNRVEVLKLDQ</aaseq>

Gene Sequence

<dnaseqindica>1461..1706#895..1219#561..808#79..333#cagtatacagcctagaacaactgcttgccaaaaaaggaaaagaaaagaaaacacttagtgcagaaactgggaattgcaatggcgggagcaagatccgttggttctctcccagtgcctaatgtgcaggcgcttgcagaaatttgcaatgatccagatgaacacatacctgaaaggtacatcagaccagaggctagttctgaggaggtcatcaacaactaccaaggtgacatggcgattccgatcatcgatctcaagaaattgctttgtccgcaatcatcagaagaggagtgtgtgaagctgagatctgcctgccagtattgggggttctttctggtatgtaactttaggttcttggcatttcatcttcggaaagcaacagatacctatttgcaaatgcatactgtatatacaaatgtttgaattgattaaagacgctacagataatcaaataaagttgtgggcagaaaatgaataaattcatgtcctgtaaggtagctctagctcagtttgagctgtgcaactagtataatggaaacatttacttttggaataaactacagctcattaaccatggagtgccagatgaagtgattgcaaacctgaagagagacattgttgatttctttagccagccactggacaccaagaaggagtacacacagctaccgaatagcctagaaggctatggacagagctttgttttctctgaggaccagaaacttgactgggcagacatgctgtatcttcatgtccatcctagcgattcaagggacctaaggttctggcccacttctccagcatctttcaggtgatctaccaaaaaaaaaaaaaaactgtgcaatttagcttttgataggcatctgtctcttcttaactggagatgtctggaaataggcaatccattgatgcatactcatcagagactaaaagcctggcactctgcttgtttgagttcatggctaaggctgtgggcgctaagccagagtcacttttagatttatttgaagagcagcctcgaggcttaaggatggcctattacccaccatgccggcaagctgacaaggtgatgggcctttcgccacactctgatgcgggtggcctgacactgctgctcgagattaacaatgtgcagggcctgcagatcaagaaagatggcaagtggttctccatagatgctccaaatggtgcacttattgctaacattggcgacacacttgaggtaatgaccaataacaaattatgctttcacatgtcgaaggaccttgatgtatttggatgagttcaataaaagctcctattatctagaaaacttgtcaaagcaccaaacaaaatacctaagttcaaattatttatattcttgagtccacgacttgtgttccgcttctgaacattgttgttggatgacctgcttctcttgcacctttgtactcatatgagtgatatactattgatatatacagatcctgagtaacggaaagttcagaagtgttgaacacagggccgtgataaacccaaataaagagcgaatttcagcagcactcttccactatccaagtgaaaatatggtgatcagccctctgccggagtttgtgaaagatggtaaagtgaagtacagatcaataagttaccttgatttcatgaaacaaatcttcacacaacagcttgatggaaaaaaccgagtggaggtattaaagctggaccagtagctgtgaccatgacgcctgagatactgacatgaacctgcttgggggctgtccatgagatctgctgcttagaggtgaaacaatcctgtattacaatgatgatttacctgatattttgagtcttgtaccatatatcaggaacaacatgttcttgatcaagttatgatgcaaacacctgaaacaaaaaatggaaataaacattgatgccttgaagaataaactatatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0558700, RefSeq:Os10g0558700