BGIOSGA030700

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Revision as of 09:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030700| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030700, complete gene.| tag = B1175F0...")
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Gene Name

BGIOSGA030700

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030700, complete gene.

LocusTag

B1175F05.20

Ensembl Transcript ID

BGIOSGA030700-TA

Ensembl Protein ID

BGIOSGA030700-PA

Length

3971

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12172662..12176632

Sequence Coding Region

12172662..12173045,12174003..12174143,12174242..12174607,12175061..12175303,12175562..12175654
,12176070..12176270,12176420..12176632

Genome Context

<gbrowseImage1> name=IndicaChromosome09:12172662..12176632 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:12172662..12176632 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTCCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGCCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTCCTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTGCTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCTCTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACACACTTTGGAGATTAAATCATGGGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGGCATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGTCCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAAGCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGAGGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATTTGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAAAGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGGAGAAGAAATTATTGCTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAATCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGCAGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATTTAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGCGACGCGTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCTGACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACAACACAATAGAACCGTATGCCAAAATGAATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAARHRGGGTHAAPLLLVVLLLLSMGRLPRAAAVGLGGGLGELMTKVPFSPGDVLPVLPRQVSWPVMNTLHSAVDLLPSFVAAVAPGAAPSDAAWSGACFARNEAALELTPGDRNGTELSGAVLRLKTASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKSWEEEAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTTIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTAVCLKDEKGEVWVAESGFENEKGEEIIAIVPWDEWWAMALKDSSNPQIALLPLHPDVRARFNESAAWDYARSMVGKPYGYHNMIFSWIDTIGDNYPPPLDANLVMAVMSMWTRLQPLYAANMWNEALNKRLGTEGLDLHGIIVETERRGMSFDQLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFTPFAESIQVTEFTIRDAYMLKIFEDNQARLPSWCNTESDKLPFCQILGEYRMELPEYNTIEPYAKMNENCPSLPPTYKRPARC</aaseq>

Gene Sequence

<dnaseqindica>1..384#1342..1482#1581..1946#2400..2642#2901..2993#3409..3609#3759..3971#ATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTCCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGCCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTCCTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTGCTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAGCGGCGCCGTGCTCCGACTCAAGGTTTTGCCCCCAACTCAGGATTGGAATCGTGTCGCGGGGGGCGGTTTCCGCCGGATGTCGTGGAATTAGGTGGAATCGGTTGGGCGTGTGGTTGTAAATTAGCTCAGTGTAGGCGTGGGGAGTGATTGGAACTATTGATGAATGGGCTATATGGGCTATCACGGATGCTTCAGCCTAAATTAGGCAGAATTGCCTTAATGTGTAGTTGTAGCTTGGTTGTACATTAGGCAGAATTAGCTCAGTTTTGCCGGGTGTCGTGGAATTGGGCAGAATTGATTGGGTGTGTGATTGCAACTTAGCTCAGTGTAGGCCTGGGGAGTGATTGGAACTATTGAAGCATTCAGTCTAAATTAGGCAGGATCACTTTCGTCTATCATTGTAGCTTGGTTTTATATGAGAATTGGGAGTGGTAGAGGGTATGAATTGATGATGCAGAATTGATTGCTAGCTGGTTATGTAAGTAGCCAAAGCTACTTTTGTAGATACAGTTGCATTAGTGCTCTTTGTGGTGAGGATTCAGGGTTACTGGGTTAGAGACCTTTCTATCGAAGTCGCACTCTAATTAGGCGATTAAATTTTGTATTGTCTTTAGTGGAACGTGCAATTTTGTTTAGAAATTTCTCTTTGCTTGTATTTATTTTGTTGGGACAAGAAAAAAGATCTGAGCTTTTGAATGATATTCTCAGTGTAGTTCTGTTGATGTAAATTATGAAATTTGCTTTATACAACTGTAATGTCAACTTTGGTAGAACGTGTAACAATGATTACACATGTTAGGTGATTCATAGACAAAGGTAGAGTTGCAACATCATGGTTACTTCTGATGACTTTTCAAAAGTTTTAATCTTTTCTTGTTCATGCAAAGTGCATATCAAATTATCAGCATTGGCAGTTAAGATGATTGTTGTTATTATGAGTTTGTTCTTAACATATTTTATTTTTTGTTGTTATATGCAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCTCTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACACACTTTGGAGATTAAATCATGGGAAGAAGAAGCGGAACTGGAATATGTGTGTTTTCTTCCCAAAGTTTCTTTCCCTCCTTTTTTTACCATGCAATATCTTATCAAATTAATCTTAATGATACAATCTTTCGTGTTTGTGATCAGGTGAAGCAACACGGCATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGTCCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAAGCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGAGGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATTTGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAAAGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGTATAGTTTGCTGAACTGTCGTGCGTCTTGAAAGTTTGCATGATATTGTCTACATGTGATATGTGTGCTAGCATTGAATATCGATCATGTCCTATTGCTTTCTCTTTTTTTTTCTATTGTTTGTGTTGAATATTGATCATGTTAAGCAATTCACTAAACAAGTAAATAGTATTACTTGTTATGCTTCTGCTCTGAAATTGACACTTTTCCTCTTTAAACTCGTCCCTTTGGTAAAAATATTGTGTTGAGCCTGTAGGCCAGCTAGAGGTTTGAACTTATTGTCTGGGAGGTTCATTTTAGTAGTCAATCTGCAGTTCTTGTGTTAAATCTTGCAGCACATGCACTAATTTTCTTGCCCCCCTTCAAAACTTATTCATTCATTTTATTCCTGTGCATAACATTCGCATTTGTGTATTTTTCTTGATGATACTCTGTTACAAATTACAATAATAGGGAGAAGAAATTATTGCTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAATCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGCAGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATTTAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTACGTCATCTTTGTGTTTGATATTTTAGTTCCAGCATCGCCAGAGTGTACACATGTTCTATTGTGATCTTTTTGTATACCTATATGGGTGCACACTATATCAAGATTGTGCTCTTAACATAAACAAAACTACTAAACTATATGGGGGTTGTTGAGTGATGGAGCATCCTGATGCATCCAAATTGATTCAATCTTAATTTCTGTAACAGTATTAGTCATTTTTGTATATTGCTAAGTTCCATAATACATTGTTTTCAGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGTCTGTGAACAACTCTGTGCATTGTAATGGTTTCAGCTTTATAAAAATTGGACTACAGTTCTGTGAAACTACTCTTTGCCACAATTCCTACTTTGGGTACTGATATTGCACTAATAAAATCTACACTGTTGAAATTGTCTGCTAACCCTACGGTGATGTTGTCACTCCAGTTCAGTTTTGGTTTCTACATACTTGTTTGGACGTTGCCTAGTCTTAGGCAGACATGAAATAAGTTGGCTTGATTTCCCCTCTTCTTTTTGACTGAAAAACAGTAGGGGAGTTTTCCCCCTTAAACTAAGTTGCTTATTGAAAGAGGCATAAACAATTGTTTTATTCAATTTGCTCCTGCCACAGTTTGTTTTTCATTGCTATACTCAGCTACTAATTTCATCTCCTCTGCATTTTTTTTATATAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTGTAAGTACCTAACTACTTGTCCAAGTTGCAGGAAAACACTGTGTTCTTCAACATGTTTGAATTCATTTCGTTGCCATCATTCTTCCATTGGTTGATGCCAAAAGTTCCGAAATTCCCTACACCAATCTGACTGTCTACTTCTGCCTCAGATACGCGACGCGTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCTGACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACAACACAATAGAACCGTATGCCAAAATGAATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030700