BGIOSGA030706

From RiceWiki
Revision as of 09:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030706| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030706, complete gene.| tag = OsI_312...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030706

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030706, complete gene.

LocusTag

OsI_31259

Ensembl Transcript ID

BGIOSGA030706-TA

Ensembl Protein ID

BGIOSGA030706-PA

Length

4633

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12212330..12216962

Sequence Coding Region

12212330..12212544,12212633..12212738,12213107..12213422,12213506..12213569,12213649..12214357
,12215245..12215574,12215904..12216209,12216286..12216358,12216466..12216551
,12216681..12216800,12216903..12216962

Genome Context

<gbrowseImage1> name=IndicaChromosome09:12212330..12216962 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:12212330..12216962 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGCGCGCCCCTGCTCGGCACCACCGTCGACGAGGAGGATTTCTCGCCGCCGAGCACCAGCGGCCGCGGCCGCGGCGGCAGGAAGCAGGGACGCGGGAGGGGTGGGAATTCGTGCCACCAATGCAAGAGGGTGAAGCCGCGGCCGGAGGAGATGGTCAGGTGCCAGCTCTGCGGCGACAAGGTCTTCTGCGCCGCATGCATCAAGAACAAGTACCCGGAGATGCAGCAGGCCGAGGTTAGAGATAAGTGCCCTTTCTGTCGAAATATCTGCAACTGCACTCGCTGCAATCCCAGTGACAAGTCGGATGGACCCAGGAACCCATTTGTCAGGAGATGTAACAGCAGTAGTTCAGTAAAACGGAGAGTGAAGACTGCTGCCTCAGGTTTAAGATGCAGGGTTGATACTGCGGCACTACAGGCAAAAGCAATTGATAAATTAGAAGCTAACAGTAGGATAAACAATGAATCTGCCATGTTAGATAAGGCAGATACACTAGATGTCAGGACTGATGAGGTTGACACTGAAACTAAAAGCAAATATGCCAACTACATGCTACACTACTTGGCGCCACATTTGACAAAGCTGAACAAGGACCAGATGAGTGAGATAGAAAAGGAGGCTAAAATTCAAAGATTGGAATTGTCTCAGTTGAGTGTGGAGCAGGCTGCCTGCCGGCATGATGAGAGAGTATTCTGTGACCATTGCAAAACTTCAATCTTTGATCTGCATAGAAGCTGTCCAGGCTGCTCCTATGAATTATGCATCGTCTGTTGTAAGGAGCTCCGCGAAGGCAAACTTATGGGCTCTTGTAAGGAAGAACTGTTCTCTTATCCTAATAGAGGACCTGACTACATGCATGGTGGTGATGGTGATTCAGTACCAGAGTTGATAAACTACAAACAAGGAGACCTGTCTAGCAACCAATCTAAGGACATACAGTGGCGTGTTGATTCTGACAAGATTTATTGTCCTCCAACTGAACTTGGTGGGTGTGGTAATCATATTCTTCAGTTGAGACGAATATTTTCAAAAGACTGGTTGAGTAAACTCGAAGTGGATGCTTTCCAAATGCGTAAACAATTAGAACCATCTGATATTATCGGTAGAGACACTTGTGAGTGCTCATGTTCTACTGATCATGCAAGTTCAAGGAAAGCTGCCAGCAGAGAGGATTCGACTGATAACTACATATACTGCCCTACATTGGATAATGGAAAGCCAGAAGATCTCACACACTTCCAGAAGCATTGGGTGAAAGGCGAACCCGTAATTGTTCAACAGGTTCTCAAGAAAATGTCATGTTTGAGTTGGGAGCCACCAGATATGTGGTCTAAAGTACATGGCACCGGCACTAGTCCTGAGATTAAAAACGTGAAGGCTATTGATTGTTTATCTTGCTGTGAGGTCGAGATATGCACTCAAGACTTCTTCAATGGGTATTATGAAGGTCGGATGTATCAAAATCTATGGCCTGAAATGCTTAAATTGAAGGACTGGCCTACATCAAATCATTTTGAAGAGCTTTTGCCTTCCCATGGAGTTAAATACATGAATTCTTTACCTTTTCAACCATACACAAACTTGAAGTCTGGTTTGCTGAATGTCTCAACCTTGCTTCCTGATGACATCTTAAAGCTTGACATGGGCCCAAAATCATATATAGCTTATGGCTATGCACAGGAACTTGGTAGAGGAGATTCTGTTACAAAGCTTCACTGCGATTTGTCTGATGCAGTTAACGTTTTGATGCATACTGCTGAAGTTGACCCATCCGAGGAACAAATAGATGCAATAAAAAGTTTGAAAAGAAGACATACAGCGCAAAATGAAAAGGAGTGTTCTGGGAATGCAGACGGAAATTATACATCTCCTAAAATCTGTGGGGATGCAAATGAGTTGTCCTGTCCTATAAACAGTGAGACCAACAAGGGAGGTGCTTTATGGGATATTTTTAGGAGGGAAGATGTTCCAAAACTGAAATTGTATCTCGACAAGCATTCTAAGGAATTTCGCCATATATACTGTTCTGCAGTTCAAAAGGTATGTAACCCTGTACATGATGAAACATTTTATCTAACAGAAGAACACAAGAGAAAACTCAAGGAGGAGCATGGAATTGAGCCTTGGACATTTGTACAAAAACTTGGGGAGGCAGTATTCATTCCTGCTGGGTGTCCTCATCAAGTACGGAATCTTAAGTCCTGCACCAAGATTGCCTTGGATTTTGTATCACCCGAGAATGTTAAGGAGTGTCTCAGCTTAACCGAGGACTTCCGAAGACTTCCTAAGAACCACAGGGCCAAAGAAGACAAATTAGAGAAAGATGAAGCAACACTTTTAATTGGATTACTCACAAAAAACAAATGGCAGACATTTTAA</cdnaseq>

Protein Sequence

<aaseq>MGSAPLLGTTVDEEDFSPPSTSGRGRGGRKQGRGRGGNSCHQCKRVKPRPEEMVRCQLCGDKVFCAACIKNKYPEMQQAEVRDKCPFCRNICNCTRCNPSDKSDGPRNPFVRRCNSSSSVKRRVKTAASGLRCRVDTAALQAKAIDKLEANSRINNESAMLDKADTLDVRTDEVDTETKSKYANYMLHYLAPHLTKLNKDQMSEIEKEAKIQRLELSQLSVEQAACRHDERVFCDHCKTSIFDLHRSCPGCSYELCIVCCKELREGKLMGSCKEELFSYPNRGPDYMHGGDGDSVPELINYKQGDLSSNQSKDIQWRVDSDKIYCPPTELGGCGNHILQLRRIFSKDWLSKLEVDAFQMRKQLEPSDIIGRDTCECSCSTDHASSRKAASREDSTDNYIYCPTLDNGKPEDLTHFQKHWVKGEPVIVQQVLKKMSCLSWEPPDMWSKVHGTGTSPEIKNVKAIDCLSCCEVEICTQDFFNGYYEGRMYQNLWPEMLKLKDWPTSNHFEELLPSHGVKYMNSLPFQPYTNLKSGLLNVSTLLPDDILKLDMGPKSYIAYGYAQELGRGDSVTKLHCDLSDAVNVLMHTAEVDPSEEQIDAIKSLKRRHTAQNEKECSGNADGNYTSPKICGDANELSCPINSETNKGGALWDIFRREDVPKLKLYLDKHSKEFRHIYCSAVQKVCNPVHDETFYLTEEHKRKLKEEHGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKIALDFVSPENVKECLSLTEDFRRLPKNHRAKEDKLEKDEATLLIGLLTKNKWQTF</aaseq>

Gene Sequence

<dnaseqindica>1..215#304..409#778..1093#1177..1240#1320..2028#2916..3245#3575..3880#3957..4029#4137..4222#4352..4471#4574..4633#ATGGGGAGCGCGCCCCTGCTCGGCACCACCGTCGACGAGGAGGATTTCTCGCCGCCGAGCACCAGCGGCCGCGGCCGCGGCGGCAGGAAGCAGGGACGCGGGAGGGGTGGGAATTCGTGCCACCAATGCAAGAGGGTGAAGCCGCGGCCGGAGGAGATGGTCAGGTGCCAGCTCTGCGGCGACAAGGTCTTCTGCGCCGCATGCATCAAGAACAAGTATCACATCCATCTTTTTTCCCCCATCTGCAGTTAGATATGTGGAAAGGTGACGTGGAGTTCTCACCAAAGCTTGTGTGCTTTACAGGTACCCGGAGATGCAGCAGGCCGAGGTTAGAGATAAGTGCCCTTTCTGTCGAAATATCTGCAACTGCACTCGCTGCAATCCCAGTGACAAGTCGGATGGACCCAGGGTAATGGACATTGTGGCTTTGTTGATGTTTTAGAGATTTTTAAGATTCATTGCGACATGAAGCAGTTAGATTTCTTAGCTTCATATGATTTAGATTCATTGCTAGAAAATTGTGTTCTTCTTGTACCAGTGATGCATTGGTAGTGTTATTTTTTTCTGTTAGATCGTGAATTTCATAGGGAGTAGACGAAATTTGGCTAAACATGTTCTTTTTTAGATTGACAAGAAGGACCCCAATTTCATTTCATTAAGGACTCATAAGCCTGTTTAGTAATAGATTACTGATACAACTTGTTTAAAATCACAACTGTAAAGATATTTCGCAGTTTGCTGTGTTTCTAACATGTGTTTCTTTTTCTCCTCTTGTAGAACCCATTTGTCAGGAGATGTAACAGCAGTAGTTCAGTAAAACGGAGAGTGAAGACTGCTGCCTCAGGTTTAAGATGCAGGGTTGATACTGCGGCACTACAGGCAAAAGCAATTGATAAATTAGAAGCTAACAGTAGGATAAACAATGAATCTGCCATGTTAGATAAGGCAGATACACTAGATGTCAGGACTGATGAGGTTGACACTGAAACTAAAAGCAAATATGCCAACTACATGCTACACTACTTGGCGCCACATTTGACAAAGCTGAACAAGGACCAGATGAGTGAGATAGAAAAGGAGGCTAAAATTCAAAGTAAGCTTAGTTCTTTAGAACATCTTGAGTAATTTACTTGCTAGCTTGCAACTATTTCTTAGTACATCTCTTTCCCTGCACAGGATTGGAATTGTCTCAGTTGAGTGTGGAGCAGGCTGCCTGCCGGCATGATGAGAGAGTATTCTGGTGCTGGTTGCCTCCCACTCATCAAATACTTTTTTTTTTCATTTTAAATGTGTCCTGATTTCTTTTCCATGTGATCCAGTGACCATTGCAAAACTTCAATCTTTGATCTGCATAGAAGCTGTCCAGGCTGCTCCTATGAATTATGCATCGTCTGTTGTAAGGAGCTCCGCGAAGGCAAACTTATGGGCTCTTGTAAGGAAGAACTGTTCTCTTATCCTAATAGAGGACCTGACTACATGCATGGTGGTGATGGTGATTCAGTACCAGAGTTGATAAACTACAAACAAGGAGACCTGTCTAGCAACCAATCTAAGGACATACAGTGGCGTGTTGATTCTGACAAGATTTATTGTCCTCCAACTGAACTTGGTGGGTGTGGTAATCATATTCTTCAGTTGAGACGAATATTTTCAAAAGACTGGTTGAGTAAACTCGAAGTGGATGCTTTCCAAATGCGTAAACAATTAGAACCATCTGATATTATCGGTAGAGACACTTGTGAGTGCTCATGTTCTACTGATCATGCAAGTTCAAGGAAAGCTGCCAGCAGAGAGGATTCGACTGATAACTACATATACTGCCCTACATTGGATAATGGAAAGCCAGAAGATCTCACACACTTCCAGAAGCATTGGGTGAAAGGCGAACCCGTAATTGTTCAACAGGTTCTCAAGAAAATGTCATGTTTGAGTTGGGAGCCACCAGATATGTGGTCTAAAGTACATGGCACCGGCACTAGTCCTGAGATTAAAAACGTGAAGGCTATTGATTGTTTATCTTGCTGTGAGGTCAGTATAACATTCCTACATCTACAATACATGTTACAGTAGTTTTTCCTTGATTGATACTGACTGTAGTTTGTTTATGAGAGCGATCAGTGCTGCTATTCTAGTGAAATTGTATTTGTAGTAATGCCCTTTTTTTTGTAAATGAGTTGTCAACCTGAAAGCTGTGCCACATTTTTCTTGTGTTACATTGGCATAACACGCTGAGAGCAAACAGCTAATAGTTACATAAAAAAGGACCCACTTTGTAGTATATGAAACAAGACATCAGAATTGCTCCCAAGGGTGTCTGCAGTTGGTTGCGTCGCACACAAGCCAAATCCAGATACTTGTATTAATTAACATTCTTTACTTCATTATTGACTCAACATAATTAAATCCTGGGTGCCATCGATTCCACACTGTAGATCACTACTTCTCTTGTCAACACGCAGAACTTATGTATGAATTGAAGATTTAAAGACTGAGTTGTTCCTGAGTACAGAGGGTGTCTGTTAGCATGAAGGACCCCCTTCTTTTTGTATCCATTGACCATGCGAAAAATAAGTAAATAACACACATCACATTCAGCATCACACTAGAAATTTATGCAGTCTAGTCTCATGTGTTCTTCATTTGCCAGAAAGATTTTTACTGTATTGAGCTATAATTTTCTTTTCTTATAGTTGTCTATCTGATAATATGAAATTTTATACAGTAAACACATTTTGAAGGGAGCATGTATTTTACTAGGGGATTGCCTTCAAACAGTTTTGTTTAAACTCTATCTTAATAGTGGTTAAGGATGATGCATGAAAACATATGACCCCCATCAGTGCACCTATTGTAATTTTCATTTATCATAAACTAGAAAAGAAAAAAACGTAATATTCTGTGTCTGTGTAATCCAGGTCGAGATATGCACTCAAGACTTCTTCAATGGGTATTATGAAGGTCGGATGTATCAAAATCTATGGCCTGAAATGCTTAAATTGAAGGACTGGCCTACATCAAATCATTTTGAAGAGCTTTTGCCTTCCCATGGAGTTAAATACATGAATTCTTTACCTTTTCAACCATACACAAACTTGAAGTCTGGTTTGCTGAATGTCTCAACCTTGCTTCCTGATGACATCTTAAAGCTTGACATGGGCCCAAAATCATATATAGCTTATGGCTATGCACAGGAACTTGGTAGAGGAGATTCTGTTACAAAGCTTCACTGCGATTTGTCTGATGCAGTAAGTTGTTATAATACTATGGCCATTTATGGTTCATATAGTTCATGAAGAGTCCTTGGGCAAGTTCATTTTCTTCTTTGAAGACTTAAAGTTACTCTTTTTTTTTTTAAAAAAAAATAACTGTGGTATATAAAATGAGATCCTGCTTCCTTATTTACCTGAGACCATTTTTTGCTTGTAATTCAAGACACTGAGACAACAGTGCTCTTGACACAGCTAGTTGATTATGCAAACTACTGACTATTCTTCTCCCACAGTGAAATTGTTAGCTTATAACACTGGCATCTTGTTCTGTTTATTCATCTAAACCTATGATGGCTTTTTATTAGGTTAACGTTTTGATGCATACTGCTGAAGTTGACCCATCCGAGGAACAAATAGATGCAATAAAAAGTTTGAAAAGAAGACATACAGCGCAAAATGAAAAGGAGTGTTCTGGGAATGCAGACGGAAATTATACATCTCCTAAAATCTGTGGGGATGCAAATGAGTTGTCCTGTCCTATAAACAGTGAGACCAACAAGGGAGGTGCTTTATGGGATATTTTTAGGAGGGAAGATGTTCCAAAACTGAAATTGTATCTCGACAAGCATTCTAAGGAATTTCGCCATATATACTGTTCTGCAGTTCAAAAGGTAAGTATGGGCGTGATTTATGAACAACCTTGCACTTGTGACCATCATGCTTAATGCCACCTTATGTTTTTTGAAGGTATGTAACCCTGTACATGATGAAACATTTTATCTAACAGAAGAACACAAGAGAAAACTCAAGGAGGAGCATGGTGAGTTCCTTTATCTGCTAATGTGATGTTGTGGATTTGTAGTAATTATTTGTAATAGCAAATGGTTGCGTTGAAAGGTTATTTGAAATCCTGAGATGCTCATTTAGGAATTGAGCCTTGGACATTTGTACAAAAACTTGGGGAGGCAGTATTCATTCCTGCTGGGTGTCCTCATCAAGTACGGAATCTTAAGGTAATTTTTTCAGTGTACTCTTTCAGTACCGTGACTTCTTGCAGCACTGCATACTTGAGAACTGGGTTGAAATACTTGCCAAGTTTCACATGTTTTTGTAGCTAATTTCTTATTAATGCTATGTTGCAGTCCTGCACCAAGATTGCCTTGGATTTTGTATCACCCGAGAATGTTAAGGAGTGTCTCAGCTTAACCGAGGACTTCCGAAGACTTCCTAAGAACCACAGGGCCAAAGAAGACAAATTAGAGGTAAGTAACACATTTCCAATGCATACCCATTTTGAACCATTTGGCACGAAGTATGTTAGTATGTGTAGTCCTAGGCTTAAGCTTATCACCCCATATATCCAGAAAGATGAAGCAACACTTTTAATTGGATTACTCACAAAAAACAAATGGCAGACATTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030706