BGIOSGA030708

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Revision as of 09:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030708| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030708, complete gene.| tag = B1339H0...")
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Gene Name

BGIOSGA030708

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030708, complete gene.

LocusTag

B1339H09.19

Ensembl Transcript ID

BGIOSGA030708-TA

Ensembl Protein ID

BGIOSGA030708-PA

Length

4507

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12310918..12315424

Sequence Coding Region

12310918..12310993,12311359..12311460,12312511..12312656,12312888..12313106,12313603..12313818
,12313906..12313995,12315224..12315424

Genome Context

<gbrowseImage1> name=IndicaChromosome09:12310918..12315424 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:12310918..12315424 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCCTCACCCTGCCGCCGGCGCCCACCAACCCTCGCCAGGACGCCATCGACCTCCACAAGGCCTTCAAAGGTAGAACTGTTGTTGTTGGAGTCTTAGACTGTCAGATGTTGAAAACCTGGACAGGACGGGCCGAGGTCGGGAATGGGGCAGCTTTCAAGGGTTCTAGTGGTGGGTTTGGCTGTGATAGTACAACAGTTATAAATATACTTACTCATCGTGACTCGATGCAACGCGCGCTCATTCAACAGGAATACAGGACTATGTATTCTGAGGATCTCTCTCGCCGTATATCATCTGAACTCAGTGGACACCACAAGAAAGCAATGCTGCTATGGATTCTTGATCCTGCTGGACGAGATGCAACTGTTTTGAGAGAAGCTCTGAGTGGTGATACTATTGACCTGAGAGCAGCCACTGAGATAATATGTTCCAGGACACCATCGCAGCTGCAAATAATGAAACAGACTTATCATGCAAAATTTGGTACTTATCTTGAGCACGACATTGGTCAGCGCACATCAGGCGACCATCAGAAGCTCTTGCTTGCTTATGTGGGGATTCCACGCTATGAAGGTCCTGAGGTTGATCCTACTATAGTGACACACGATGCAAAGGACCTCTATAAAGCTGGTGAGAAAAGGCTGGGCACTGATGAGAAGACCTTCATCCGCATTTTCACTGAACGCAGCTGGGCACACATGGCATCTGTTGCCTCTGCTTACCATCATATGTATGATCGGTCACTGGAGAAGGTTGTGAAGAGCGAAACATCTGGAAACTTTGAACTTGCTCTGCTAACTATCCTCAGATGCGCTGAGAATCCAGCCAAGTATTTTGCAAAGGTCTTGCGGAAGTCCATGAAAGGTATGGGCACTGATGATAGTACACTTATAAGGGTTGTAGTAACAAGGACTGAGATCGACATGCAATATATCAAGGCTGAGTACTACAAGAAATACAAAAAATCATTAGCTGAAGCTATCCATTCCGAGACCTCAGGAAATTATCGAACATTCCTCCTTTCTCTAGTTGGTAGCCATTAG</cdnaseq>

Protein Sequence

<aaseq>MASLTLPPAPTNPRQDAIDLHKAFKGRTVVVGVLDCQMLKTWTGRAEVGNGAAFKGSSGGFGCDSTTVINILTHRDSMQRALIQQEYRTMYSEDLSRRISSELSGHHKKAMLLWILDPAGRDATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLAYVGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSLVGSH</aaseq>

Gene Sequence

<dnaseqindica>1..76#442..543#1594..1739#1971..2189#2686..2901#2989..3078#4307..4507#ATGGCGAGCCTCACCCTGCCGCCGGCGCCCACCAACCCTCGCCAGGACGCCATCGACCTCCACAAGGCCTTCAAAGGTCCCCCCCCCCCCCCCTCAAATTTCTCTAGCTTTCTCTCCCCTTGCGGGGGGAGTCGCGACGCGATCGGATGTAGGGTTCGCGCGGCCTTGGGGGGTAGTGATGGTGTGTGCTGTTTTGGCGAGCTTGATGATATTATGCATTTTTTTAGGGTTATAAGGGATTTGCGGTTTTTGGACTTTCGGTGCAGCGGCGAGCGTTTCGTTGTAATGGATTGTTAGTGTTTGTGTGGTGTGGTCAGCGCGCGGCCGGTCTCGGTCTCAGATGTGTTGAGGCTTATGGGGGAAGTGGGGGGAATCGCCGTTGCAGTATCCGCTGGATTGTTGTCATGTATTGAATTCAGGTGTTTTTTTTTGTTTTGGAAGGTAGAACTGTTGTTGTTGGAGTCTTAGACTGTCAGATGTTGAAAACCTGGACAGGACGGGCCGAGGTCGGGAATGGGGCAGCTTTCAAGGGTTCTAGTGGTGGTAATTGCATCGACTAGGACTTTTTTGACCCATTTTAGAAATTGCCCCGAACAGAATTTGGAGTCAAGTGGATTTATACGGAGATAAACTACAGTCTTGTCCCCATCTCAACAGGTCCATTTTCAGGGTCAAAGTGCACAACCGTGTAGTCTTAACAGCTGCTGGATGTGGGTGTTATTGGGTATAGAGCACACGGTTAAATTGAAAAGGAAAAGGAAGTAATCTTATCATCTATGGTAAAAAAAAGAATTCGTTTTAGATAATATTGACATGCTTGTTTTTGTTATCGTTTTTGCGACTACAAAACCCCATGTGTGATTTACATGTTGAAAGCACAAAGTTATACGAGTCATTAGGACATTCCCAAGTCGTTTAGAAAATATGTTTTGGCATAAAAAGAATTACATATTATGGACATCTTCACCGTGAATTTTATAACATCATTCTTATGCTTCAATCTATATAATTCTTTACTTATTTATAGACAAAGCTAGAAAAGTTTGACTGAGACAAATCCTCAAATGACTTATCTGTTTGATTTTTCTGGTCCATTTTATCATCTATTACTTTCTCTGTATAATAATTTTTTCTTTAGATTGGGTATGACTTCATATGATTTAGTAATATCTGGTTGCTTCCAAAATTAAGTATACTACTGACTCTTATTCCCCCCGGTACACCAAGCCCTAGGCAATCGCATTACCCATTTGATGTGACCATTTTGCCCTGGTTATTTGTTTGGTGTGCGAATCTGCAGGCAAGTACTCAGGAACTCAGAAGCCTAACTGAGTAGGAGTGGGAATGAAATTATTAATTGTAGGGTAAAATGTGAAGCCAGGTTGTGGGATCTGAGTTGTGACAAATATCTGTGAACAGTTTTTGTGGTCAAAGGTTACAATTGTGGGTGGAGAAACTCCATTTTAGCAATTGAGCAGTTTGCATAAATACAACCTTTAGTTGATATTGTGAAATTTTCATTACTAGCTAGTAGCTGCCCTGCTTTATGTTCTTATTTTCCTTTTTGATTTTGACCTGCTGATGGTCTTACAGGGTTTGGCTGTGATAGTACAACAGTTATAAATATACTTACTCATCGTGACTCGATGCAACGCGCGCTCATTCAACAGGAATACAGGACTATGTATTCTGAGGATCTCTCTCGCCGTATATCATCTGAACTCAGTGGACACCACAAGGCATGCAAAATTCTAGAAGAATTCTTCATTTTACTGAATAATAGATCAAATTATAAAGCTAACTGTAGCGATATACTTAATCTAGCTGTAGATTCAGATAGTAGCCAAGTGATAATTAATACAAGTTACTTCGATAAGTGTTAACCAAATATTTGTTACCTCACTTCTGAAAAGAGTTAAATTACTCTAGATTGATGTGCTATTTATGATTAACTTTGTTCATGATTGCAGAAAGCAATGCTGCTATGGATTCTTGATCCTGCTGGACGAGATGCAACTGTTTTGAGAGAAGCTCTGAGTGGTGATACTATTGACCTGAGAGCAGCCACTGAGATAATATGTTCCAGGACACCATCGCAGCTGCAAATAATGAAACAGACTTATCATGCAAAATTTGGTACTTATCTTGAGCACGACATTGGTCAGCGCACATCAGGCGACCATCAGAAGGTCCTATTCTTATTAGAGTATCTGTTCTATTTTTCGTTTGACTTCTTACATGGATGAGGTGCTCGAATTGCTTATCTTTTGTAGTTTTGAAAGCTGTTTCTGAAACACGGATATTTTGCTATTTCTTTTCTCAGAAATATCTTAATAGCCAGTGAAACTCTTTATCTTGGCATCTATTGTTTCACCTTACCTGTGATGTACAAAGAGATCTGCACTATATAGGCTTACTGCCAGCGGTGGAGATAGGGGGACGGCCAATGGCCTGCCCCCCTTCAATATTTGTGTTTACAGATAATCATCTAATTAATTAGGTGAATAGCCTAAGTAAGTATATTAAGCCCCATCCAAGATTCTTAGGCCCCTCCCATGCCTAAATCCTGGCTCCGCCGCTGCTTACTACCCAATATGCCGATCAATATTTTCATATTAATATACCTATACGAATTCACTTTTATTTTTCTGCTGGAGGCAGTGAATGATATAACATATGTTGCAGCTCTTGCTTGCTTATGTGGGGATTCCACGCTATGAAGGTCCTGAGGTTGATCCTACTATAGTGACACACGATGCAAAGGACCTCTATAAAGCTGGTGAGAAAAGGCTGGGCACTGATGAGAAGACCTTCATCCGCATTTTCACTGAACGCAGCTGGGCACACATGGCATCTGTTGCCTCTGCTTACCATCATATGTATGATCGGTCACTGGAGAAGGTAATAATACTCTTGTATACATGTATTGGTCTCTCACTCTCATGGAACTTTTCACTGTGATCATGGAGTGTCCTCCATTTATGGTAGGTTGTGAAGAGCGAAACATCTGGAAACTTTGAACTTGCTCTGCTAACTATCCTCAGATGCGCTGAGAATCCAGCCAAGTATTTTGCAAAGGTATCTCATTCTGCAATCTTCAGAAAGAAAATTTATAAGCATTATGGTACTATTGATTCATTGGAGAGGCAAATTCACCAAATAGTGCACCGAATTTTCTTGTTACATATATTGCTTTTTTATCCACATGAAGTATGGCAGACAGCTGTGTACTTTTGATGCAGCAAATTATCTATAGCATCTGGAAATAAATATGTGGTTGCCCCATCCATTACTGAACATAAAGCCTGCAAGAGCTGGCTAAGCTCTGTAGTTATCTTATTTTCTGTGCATCTCTAGTTGCAATCCATGGGCGTCTTTTTTCCTTGGAGTCCTATCATAATCACACGACTGAATCCTCTATTACCTTCCTTCCCCTTATCAGAAATAAATTTGAAAATATACTGTTCATTCAATTATTTTCAGAAATATTCGGGATGCAAAATTTTTTGCAGAAATATACCGTCGGTCTCGCACAACCATTGCGCGAAAATGACATAGCGTGACGTCGCGAGCGGTATCGCGCAGCGAAAGTGCGAGACCGTGTGGTCTCGCGGAACCGAAGAGAGAGACCGCGCGGTCTCACATATGGGAACAGCGACACCGTCCAACGGCTCCACTTTAATTAGTGATTAATTACCTAATTAATTATTAACTAATAATAATTAGTGATTAACTATCCTGATTAGCGAGACCGTTCAGCAAATTAATTGAATCGGCGGTATCGCTGTCTGGTCCCTGAGACCGTTCGGTCTTGCTATTCCATTCCACGCGGTCTCGCACGATAATGCCTACGACGTCACGGCCACGCCATTTTCATGTAACGGTTGTGCGAGATCGACGGTATATTTCTGCCAAAAAAAATGCATCCTGAATATTCCTTAAAAAAATTGAATGAACAGTATATGTTCAAATTTAATTCCCCCTATCACTCCTGGACTGATCACTAGTGCTCTTATCATTTTAGGCTGGTAACTAGTAGTATTACTGATGTTACAATGTTTCTATTTTAACATGCTGCTAATTCTAGATGTCTAATGCATATGAAAATTTTTTCCATGGCCATTGATGTGGTTATCTGTTTATGCAGAGGTGCTTAGCATCCTCAAACCTACCTATATATAAAGAACTTCATGAAATGTGTTATCCTCTCCATTTAAGACTTCTTTTGATTCCTTCTTTAAGATTGACGTCTTCTTCATTTGGTAGTTGTGATGACCTTATTTTTCTCTGAACCATATAAATTTAGGTCTTGCGGAAGTCCATGAAAGGTATGGGCACTGATGATAGTACACTTATAAGGGTTGTAGTAACAAGGACTGAGATCGACATGCAATATATCAAGGCTGAGTACTACAAGAAATACAAAAAATCATTAGCTGAAGCTATCCATTCCGAGACCTCAGGAAATTATCGAACATTCCTCCTTTCTCTAGTTGGTAGCCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030708