BGIOSGA030729

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Revision as of 09:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030729| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030729, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA030729

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030729, complete gene.

LocusTag

OSJNBB0014M19.5

Ensembl Transcript ID

BGIOSGA030729-TA

Ensembl Protein ID

BGIOSGA030729-PA

Length

3464

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12679546..12683009

Sequence Coding Region

12679546..12679571,12681355..12681407,12681496..12681606,12681688..12681824,12681903..12681981
,12682077..12682170,12682261..12682313,12682586..12682666,12682756..12683009

Genome Context

<gbrowseImage1> name=IndicaChromosome09:12679546..12683009 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:12679546..12683009 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTCCTCGGTTTCCCCTTCTTGTCTTTGGGACTGGCAAGCAGCGGAGCATTGCGAAAGCAATGCTGCAAGTCATGATGTTTCTAGATTCATGTGGGACTGCCTCAATCAAGATGATGATGACCTACTGGGATTGCTGGGCAATCAAACTCCTCTAAGAGACTGTCGTGGCTTCTTTGATATTGATGATTTCACCTGCAAGGAGACGTTGGACCTTGAGGAATCTCGGGAATCAAAGCGCCGCCGCATATTGGAGTACCCTTCTGAGTCTAATCAATCAGAAGATGGAAATCGTGAAATAAGTTCTACCTTGGGCACATCTGAGGTATCAGAAATTTCATTGCTTTGCACCGATGAACCGCAGAGCTTCAATTGGGATTCACAGAACAATTCAAATAATTTTGATTCTTTGTCAACTGGAGCATTCTACCAATCATCAAATAGTCATTCGAAAAATTGCTCTGATGAAAATCAAATGCATTTCAGGCATGACCAAATGCATTCTAGCCAGGAGAGCGTTACATATACCAATGATCAAAGTGGTATTTCAGGAACTACTGAGAATGATTCAGTGACAGAAAGTCTTGTAATGCAGGAGACTAGGAAGCTTTCTACACTTAAAGTATCTAAAGGAGCCTCACTGGTTAAGGCGAAGCAGAATTTAACTACAACTATAGCATACCCTTTTACCCTCATCAAACCATCCTGGGAGGAAGGAGACGTCATCACTCTGAAGGATATAAATCAGCGAATCCGTGCTCCTCCGAAGAAGGCTCCAGAAACCCTAGGGACTTCAGCCTTCTCTGGCAAGCCAGTCGTTGGCAAAACAAGGATCAGAACTGACGGGGGCAGAGGCAGCATCACGATACTAAGAACAAAAGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MKSSVSPSCLWDWQAAEHCESNAASHDVSRFMWDCLNQDDDDLLGLLGNQTPLRDCRGFFDIDDFTCKETLDLEESRESKRRRILEYPSESNQSEDGNREISSTLGTSEVSEISLLCTDEPQSFNWDSQNNSNNFDSLSTGAFYQSSNSHSKNCSDENQMHFRHDQMHSSQESVTYTNDQSGISGTTENDSVTESLVMQETRKLSTLKVSKGASLVKAKQNLTTTIAYPFTLIKPSWEEGDVITLKDINQRIRAPPKKAPETLGTSAFSGKPVVGKTRIRTDGGRGSITILRTKG</aaseq>

Gene Sequence

<dnaseqindica>1..26#1810..1862#1951..2061#2143..2279#2358..2436#2532..2625#2716..2768#3041..3121#3211..3464#ATGAAGTCCTCGGTTTCCCCTTCTTGGTAAGTTCGTTTTCTCTCTTGCCCTCCCTGCTTGTATTGGTGTTGCATGCATGGAGTTAGATGTGTTCTATAACTCCATTTTTCTTTTATGAATCTGTTTATGTCAGGATTGATCCTGGCAATGTGCTTAGATTTGTTGTTAGGGGTTGCTAAGTATGTTGCGAATCTAGAGTATGGAATGCTACCAATGTCAGAGCAAGACTATGATTGGTGGGTTGATATTAGCAGTGAGTGGGTATGATTTGGATAAATTTCGTGATGAAATGGCTAGCAAGGTAATCTGGGGGCCAAGCAAAGAAATTATAGTTTGGGGGTTTGGACACTGAAATTGGAACTGAAATCTGGGGACCAAGCCAAGAAATATTAATCCTTGGATATATGTGTGTTGTCATGAACTAGTATATGTTATATATTGCCCAAGAAAATGTTATTGTTCTTGCAGTCCTATATATGTATGGTTTCTGTTGTAGCCCTATATTACCAAATATTGTTTCTGCTAGATATCAGTCAAATGAATTATACAATCAGCTAGTAGTAATAAGTTGTATCATTTTGCCCAAATATCGTTTCGGATTCAGCTCTATATTGCAGCCAATTGCTACCAGGGGTATACTGGTCATTTCAGGTGCCCATTCCACGCTGGCAAGCCCATGTGGCGGTGTACAGTGTGAAAAGTGGCAAAAAATTAGAAAAGCTTCTCTCTCGAGTGGCATATTGTCAACTGCAAACCTAAAGGGGGTATTTGAGCAATTGCCAAACGTAAAAGTGGCAAATAGTTAAATTTCCCCCACGAGAGAGGGTGGCAACGTCCCTCTCGCCCGGAAACCAGCCCACACACACACTCACACCGCCCACCACCCTACTCCTACTGCCCTATCGCCCAAATTTCCATTTCCTTCTCATCTCCTCCTCCTCCTCCTACAAATGTGGCACAAGACGAGAATCATCCGGGCGGAGTAGTAGACAAACATCATAGCGCTCTTGTCTCCTCTCCTCGTTTCTTCTACTCGGAGTCAAAAAATCCTCCCAAGGCGAGGGAGGAGGGCGCTGCCGTTGGCAACGGCTATTGTTGTTGTCGGCCGCAGTCATGGACCCGTCCGGTGGCGGCGGAGTTGGAGGCATCAGCGATGAACAAATGTGGGTGTGGGGTTTACGTCTTCGGGGGTTTACTGCGCGGCCCGGGGGGGGGGGGGGGGTTGCGCGGATTGGGGTGGGGCGGGGTTTGATTTGGTCGTCGAGACGGCAGCCATGGGGAGGGGGGACTGGAATCCGGGAGGGTTTGTTGCCTCCTTTTGGGGATCTAGGGGAGGGGATGGAGAAGTCTTGTGGTTTTGGCGATTTGGTGTTGTGAGTTTGGTAGATTTGGGGGTGATCGGGTCTGGGTAGATTCGTATGATGATTTAGTTCTTGTCGGAAACGGTTTAGGTTGATGCGGTTGGGAAATGCTAGGATACTAGGAGGAGGACATGACTGTCCTTGGATTTGTGTGTTAGATTGGAAATGTTTCGCTTGAATTTTGGGCTCAAGGGGTTTGGAAATAAATGGACACATACTGTCATTGCAATGCCGTGTTGGTGATAATCAATTCTGGTTTAGGCGTCTGTCGTAACACAAAGTAAATTTCATTATGATCTATGCAGAAGCTATAGGAAGAATTCATTATGATTCAAGCTGTGTCATGCTTTGACTGTCCGCAGAACTGATTACTGTCTAAATATGGCATGCTATTTCACCGTGTTACTTTGATTGCGATTTATGTCTGATCTTGTAATGCTTACTGCAGTCTTTGGGACTGGCAAGCAGCGGAGCATTGCGAAAGCAATGCTGCAAGTCATGGTACATCGCTCAAAATCCATAAATCATAATGGCACCTTTACACAGATTCGGATTCCACTTACTATTTGATTGTTTCTTTTTACATTAGATGTTTCTAGATTCATGTGGGACTGCCTCAATCAAGATGATGATGACCTACTGGGATTGCTGGGCAATCAAACTCCTCTAAGAGACTGTCGTGGCTTCTTTGATATTGATGGTAGGGAGTTTCTTGTTCTTACCACCATCAGTTGTTATTCCTCTGAAATGTTTGCTTAAATGGAGATGTTACTCGAGTCAGATTTCACCTGCAAGGAGACGTTGGACCTTGAGGAATCTCGGGAATCAAAGCGCCGCCGCATATTGGAGTACCCTTCTGAGTCTAATCAATCAGAAGATGGAAATCGTGAAATAAGTTCTACCTTGGGCACATCTGAGGTACACTAGCACCTAGATATCTTCCAAGTTTGTTCATTGTGCTCTTGTTTACACTTCTTTTCCTGATCCATGTCTTAGGTATCAGAAATTTCATTGCTTTGCACCGATGAACCGCAGAGCTTCAATTGGGATTCACAGAACAATTCAAATAATTTTGGTTTGTCTTTTGCTTTTCATATTATATTGTTTGACAACTTAAATTGCTATGCCTTTTTTGTTAGCTAACTGAAATATTGGCATCCGATACAATAGATTCTTTGTCAACTGGAGCATTCTACCAATCATCAAATAGTCATTCGAAAAATTGCTCTGATGAAAATCAAATGCATTTCAGGCATGACCAAATGTTAGCTACTCTCTGTTTCCACAGAAACCACAGTATTTGCTTTATCATTATATTTCAATCATGACATGTTAAGCTTGGATTCATTTTTAGGCATTCTAGCCAGGAGAGCGTTACATATACCAATGATCAAAGTGGTATTTCAGGTCAGTGCAAAGTGTACATCTACAGCTTTGTTTTTAAAGTCATTTTCATTTGATTTTCCAAACATGGTTTGTAATCTATACATGAGCATTCCATCTCATCACTGTTTGTCCTTAAGTCCCCATGCAAGATATTTGTAGAGAACATTTTGTTTGCTGTTTTCCTTCAATGCAATGCCATGTTTTCAGTCACTGCAAAATTCTATACTGATTGATGGACATACTGATTTTTTAGTTTTGGCAGGAAACTTACCAGCTCTTTCTATCTATGACAGGAACTACTGAGAATGATTCAGTGACAGAAAGTCTTGTAATGCAGGAGACTAGGAAGCTTTCTACACTTAAAGTATCTAAAGGTATTTTCAGTTTGACAGTATCTATGTCATCAACATTTCTTACTTTGAGTTTTGTCTATGCTGATCATTTGTCCCTGCTGCTATACTAGGAGCCTCACTGGTTAAGGCGAAGCAGAATTTAACTACAACTATAGCATACCCTTTTACCCTCATCAAACCATCCTGGGAGGAAGGAGACGTCATCACTCTGAAGGATATAAATCAGCGAATCCGTGCTCCTCCGAAGAAGGCTCCAGAAACCCTAGGGACTTCAGCCTTCTCTGGCAAGCCAGTCGTTGGCAAAACAAGGATCAGAACTGACGGGGGCAGAGGCAGCATCACGATACTAAGAACAAAAGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030729