BGIOSGA030735

From RiceWiki
Revision as of 09:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030735| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030735, complete gene.| tag = P0465E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030735

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030735, complete gene.

LocusTag

P0465E03.14

Ensembl Transcript ID

BGIOSGA030735-TA

Ensembl Protein ID

BGIOSGA030735-PA

Length

6015

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12979191..12985205

Sequence Coding Region

12979191..12979257,12979374..12979445,12980564..12980968,12982306..12982382,12982487..12982606
,12982697..12983467,12984403..12984579,12984693..12985205

Genome Context

<gbrowseImage1> name=IndicaChromosome09:12979191..12985205 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:12979191..12985205 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAACGATGGAGAAAAGGCATCAAAACTATGCAAGGAGGCAGGAGGGCCTAGCCTAGATTCAAATCTTGCTCCAACCATCGTGCTAGCGCTCACCACCGTCCCCATGGGGTGGGATAACCGTAGGAGGAAACAAGCGAGTACGATAATGAATGCACGTGGCCGAGGGGCTAGGAATGGAAACGGGCCCAACCGGGGGCGTGGGGGTGGAAGGGCTCATTCAGATGTGGTGGTTGGAGCAAACACCACCGTACTAGCAACAAGGAGGTGGGTTGGGTTGGAGATAGATTCCGTGCCAGGTAATGAGGGGCAACGTGACATTGTGAACTACTACCTCCGTTGCGCCACTGGCATTGGTAATGGGGAGAGGGAGCTGGCGGTGGTAGGAACACACCATAGCAATAGGAGGGTGACTTATGTGGTGCATGAGCCATTCCTACAGTCCCTCAAGGAGCTGCAGGTGGCTGCGGTTGTTGGAGTTGAACGACTCATGTGGAAGTCGAGGAAGGATGTGGTGCACTGGCTCAACATGCTCATCTCAGATGTTGCATCTGATGAAGTTGCAATTTGTAACAATGATGGCAAAGATGCTAAACTTGCTAATATCTCCACAACAAAGGGCTCTTCATCATCAACTGCTGGAAATGATTCAGGGGATTTCAAATGGTTAGGTCCTGAATCGCATTCTAAAAAAGGGAAGAGCTACAAATCCTTCTGGCGAAGGGGATTTACATTCATGGTTCACGATTTTGTTTACATCTTGGTCCAACATGGCAACAAACTTGTTGCTTATGTGGAAGAACTCTATGAGGATAACCATGCAAACAAGATGGTTCAGATACGACGGTTCCACACACTCAACTCCACCGGTATTCAACTTTCTCCAGGTGTTAATGATAGAGAGATCCTCCACTCCGACAATTTGCAAGACATCGGAGTTGAATGCATAGATGGATTGGCTTCAGTCCTGAACGAAGAACACTTTGAGATGTTTCAGGCAATTGCCAACAACACCAACAGGCAACCCTACCTATGCATCCGGCATATCGACAATAACAGCAATGTCAAGACCTTTGACATTGCACAACTGCAAGGGTATTCAGAACAGGAGATATTTAGAATAGTCTCAGGCACACCTCCCGTGACCGTGCATCCCGACGCATCTGAAGGCAGCAAGAACACACCAAGATCATCAGCCAGAGGTCATCATCATCATCGGACCATGGAGAACCCCACTGCTAGTGATGAGACCAATGTTCAGGCCACAACAATCAATGTCCTTGCACGCAATGCTGCACCAACAGAGTCTGCTTCTGCTCTGATAAACTCTGCCCTGGAGAAGTATCTTGAGCAGTACTTCTCTCATGGTTGCCTTGTGGAATGCCTAAGCCAGGACAGTGGCATTAGGGGCTGTTGGTTCATCGGTTCAGTGATTAGGAGGCGCGGAGATCGCATCAAGGTGAGGTACCAACACCTCCAAGATCCCGAAACGCCAAGAGCAAACCTAGAGGAATGGTTGCTTGTGACAAGAACCGCTAATCCTGACACGCTGCGCATACGCCTCTCTGGAAGAACAAGAATTCGTCCCCACAATATGTCAGAGAGGGAGAACCCCTCTACGATCAGTGTTGGCACCGTCATTGACGGATGGTTGTATGATGGTTGGTGGGAGGGAATTGTGCTGAAGCTTGTTGCCATGTCAACGGAGTTCTTTCCCTCGTCTGAATTTGCAGGGGAGAAGAAGATGGTGCTATTCCGCAAGGATCAACTGAGGCATTCACTCGAGTGGATTGACAACGAGTGGAAGAATTTTGCTCACCGGGAAGATATCGCACGTCGAATCCCTAGTGCGGAAGATCTTAGAATAAGAGTCATTACTGCACGAGAAGTTCCTACAAGAGAAGAAGTAATGAAGCAATTGGAAGGCCTGAAAACAAACAAAGGTGGTTCAAACTCTGCAAAACCAGCTGCAGAGAAGGGAAGTAGCAGCTCTGCTACTAAGAAAACCACACCTGATCTCATTAGGCATGCAACAAATGATCTAGGATCTTCAAACTTCAAGCATGTCAGTGTTCCTGCCTCTGAAGAAATTAGAACTGATAACAAGGGATCGCAAGTTAATCTTGAAAATGTCCTGAAGTCGGACAGTCTAAAATGGACCGAGCATAAGGCTAGAGGATCTTTTGGTCCAAGAATGTAG</cdnaseq>

Protein Sequence

<aaseq>MGNDGEKASKLCKEAGGPSLDSNLAPTIVLALTTVPMGWDNRRRKQASTIMNARGRGARNGNGPNRGRGGGRAHSDVVVGANTTVLATRRWVGLEIDSVPGNEGQRDIVNYYLRCATGIGNGERELAVVGTHHSNRRVTYVVHEPFLQSLKELQVAAVVGVERLMWKSRKDVVHWLNMLISDVASDEVAICNNDGKDAKLANISTTKGSSSSTAGNDSGDFKWLGPESHSKKGKSYKSFWRRGFTFMVHDFVYILVQHGNKLVAYVEELYEDNHANKMVQIRRFHTLNSTGIQLSPGVNDREILHSDNLQDIGVECIDGLASVLNEEHFEMFQAIANNTNRQPYLCIRHIDNNSNVKTFDIAQLQGYSEQEIFRIVSGTPPVTVHPDASEGSKNTPRSSARGHHHHRTMENPTASDETNVQATTINVLARNAAPTESASALINSALEKYLEQYFSHGCLVECLSQDSGIRGCWFIGSVIRRRGDRIKVRYQHLQDPETPRANLEEWLLVTRTANPDTLRIRLSGRTRIRPHNMSERENPSTISVGTVIDGWLYDGWWEGIVLKLVAMSTEFFPSSEFAGEKKMVLFRKDQLRHSLEWIDNEWKNFAHREDIARRIPSAEDLRIRVITAREVPTREEVMKQLEGLKTNKGGSNSAKPAAEKGSSSSATKKTTPDLIRHATNDLGSSNFKHVSVPASEEIRTDNKGSQVNLENVLKSDSLKWTEHKARGSFGPRM</aaseq>

Gene Sequence

<dnaseqindica>1..67#184..255#1374..1778#3116..3192#3297..3416#3507..4277#5213..5389#5503..6015#ATGGGAAACGATGGAGAAAAGGCATCAAAACTATGCAAGGAGGCAGGAGGGCCTAGCCTAGATTCAAGTAAGTGTAACCCTGATTTATTCTCAGAAATAGATGATGAGGAACTCTAACAAATTTCAAAGGTAGTTCCTCGTAGAATACATTGACTGATTAACCACCTAAATTAACTCTTGCAGATCTTGCTCCAACCATCGTGCTAGCGCTCACCACCGTCCCCATGGGGTGGGATAACCGTAGGAGGAAACAAGGTATTTTCTTTTAATCGGTTCATCTCTTATAGTCTTTTTTGTTGTTGTTTGATATTCAATATGGCTCTATTTGGCACAACTCTAGATCTTAGATCCACACAGAACTTGAAGAGTATATTAAATTATATTGTTTTCAAAATTATTTTCTACTCTAAAATAGGAACAAAATGATTCATCCAAGTGTTATCAACGTAATCATAGATCTAGATCTATGGATTTGTGGAGCTACCGATACCCAGGTCCAAGAAACCTTGGATCTGAAGTTGTGTGAAAAAGGGCCCTAATAAAATAATACAATAGTCCTTTGCTCCTTGTAAACTTTTATCCAATTCAAACGTTCGGCTATAACCTGTACTAAAATATGCCTATTGTATCAAACTCATGGGATCAATACCCAATTCTATCACAATGAAAATAAACATGATTATCTCTAATCATGAGATTCAATGAAATTTACACTTCGTTTTATACACTTTCCCGAGACAAATTATGAAAAATATCAATCAACAATTGACCATTGGCTTCCATGGGAGAGGGTAACTACGGTTAGTTGAAAGCCATAAAAACATAATAGTTTTTATTAGTAACTATCCCAAGTAGTAACTGAACAAAAATTTAGGTACGACAAAACTTGGGTGATTATTTGGGGTGATTGTTCTCCTTGCGTAGAACTTTCCCTGACTTTGGCATACATTTATATAGGAAGTACAATTTTAATTTTTGAAACTTGACCAAGTTTTAGCCCAAACAAAATGATATTTACTAGGCTGATCAAACCAGCCCCAACATCCCAATGAGGAACCCCTAGAGCATAATTCCTCAAAATCTACAGGGTGAAGCTGCCATTTCACAACCCACATAAAGGAAACCTAATTGTGCAATTACAGCAAACTCTAGGGTCATCTATGCAAAAGCATGCTCATTCCCCTCCTATAAGAACATCTAGACCCCATAGAGCAAACATTGTATTGCCCGGCTATGAGAATTTCCAACGTTATCTAGAGTATTTTCAAACAAATTCTTTGTAGCCTACCACTATAAGCTTAATCCCTCACTTGACCTTTCTTTCATGGTCTCGAGCGCAAGGTGGTTACTAATCCTCTATTTCTTTACTCTAGCGAGTACGATAATGAATGCACGTGGCCGAGGGGCTAGGAATGGAAACGGGCCCAACCGGGGGCGTGGGGGTGGAAGGGCTCATTCAGATGTGGTGGTTGGAGCAAACACCACCGTACTAGCAACAAGGAGGTGGGTTGGGTTGGAGATAGATTCCGTGCCAGGTAATGAGGGGCAACGTGACATTGTGAACTACTACCTCCGTTGCGCCACTGGCATTGGTAATGGGGAGAGGGAGCTGGCGGTGGTAGGAACACACCATAGCAATAGGAGGGTGACTTATGTGGTGCATGAGCCATTCCTACAGTCCCTCAAGGAGCTGCAGGTGGCTGCGGTTGTTGGAGTTGAACGACTCATGTGGAAGTCGAGGAAGGATGTGGTGCACTGGCTCAACATGCTCATCTCAGGTAGGCACTTCTAAGTCCATTCCATCTTATTATCCACTGTGCTGCAATTTCATGCCTCCGTAGAGGGAAAAATGATTTTTTTATCACCTATGTTAGATTTATGGTGAGTGATGTGAGAGTTTCTTGGTTTTCTATGCTTAGCTTATTGATATTTGTTTGTTACTTTGATTATGCTCTCGTTTGTTTATGAAAAGATGAAATGTTAAACCCATTAAAGCTTTTAGTGGCTATGGATAGTATAAAGCAATGTGTAAGGGCCAACTTAAATATGGGTTATTCCCTATCTCTAGAGATACATATGCACACACAGGAAAAAGTGCAAAAAAAGGTGCTTTATACTTCTACTCTAAGCAACTTACAATTGCATTGTGGATTTACCTAAGGAGCTACATATCCCTTAAAAAAGGATCTCCATATGAATTCATTTAAGGACATATTTTTTGAAAGTTAATATGTTTATTATTGTATCTAAGGAGAGGGTCTTACTTCGGTAGACATTTCCTTTATGCCTTTACCGCTGTCAGTTTATTTATAAACATATCTGAGCTACCGATGTGCGGATCTTAACCCCTATGTACTAGTACATAGTTAGAGGGCCCTGGCCCCATATGCCAGTCACGCAATCGATGCTATTTTTGTAATATGAACGTGCTTGTAGTATATATTGTGAGCAAAATTTTCCAATATATAGTGAAGATATGCATATAGAGTTGAATGATAAAAAAAACTCGCTTGCTTTTTAGTATATTGTTTCCACTTGCTATTAGTATGGACTTGACCTTGCATATATTTCTTTGGGTTGGTTTGATTTAAGCTTTTGCAATTTAGATGAAGGCTTGCCAGATCTGTATATTTCAGACATGCAGAGTCATTAAACCCACAGAGTCATAGGACTACACTTAAATGGTTCTACACTTTTGTTCTTTAATAAGTCAAATATCCAGTTTTTTTAATCTAATTTCCTTGCTCTTGAACAAAGCTGTGAATTGAATTAATCAAGAGATATGCACTTTTCTAGCATTAGTGACACACACATATATGTCATTCTTCTGTTCTTTCTTCCTTTTGTTTCATTAGGAAAATGAATGGGCCTCATCATTGGGCAATCAATACCTCATACCTCAATGAGATAATGTTCCTTGTTACCCCATATTAACAATCTTTTTAGGACATGTTCAGTTTGATTTCCTTTTTGTTCATCGTATTATTAACATTTAGAATTTATACAATCTGCGCTAATGTTTGGCCTAGTCAGCTAATCACCACCACGGAAAGTGCCTTGCATATCTTTATTTACTTGGCTTTAGCCGATACTAATAGTGTATCATCCATTACAGATGTTGCATCTGATGAAGTTGCAATTTGTAACAATGATGGCAAAGATGCTAAACTTGCTAATATCTCCACAACAAAGGTACATTAAGTTAATTTCTGATCATTTTTATTTTTCATGAGAAATGCTTCCGATAAACCACTATATATTGAAGTTAATAAGGAAATTCCATTTTATTCATTCAGGGCTCTTCATCATCAACTGCTGGAAATGATTCAGGGGATTTCAAATGGTTAGGTCCTGAATCGCATTCTAAAAAAGGGAAGAGCTACAAATCCTTCTGGCGAAGGGGATTTACATTCATGGTACGCCTATCAATCATTCAACGCACATTTTTTTAAATCTTAGAGGACTGAATCTTGGCTTACATCCATTGTGTTCATGACCCTTTTTAGGTTCACGATTTTGTTTACATCTTGGTCCAACATGGCAACAAACTTGTTGCTTATGTGGAAGAACTCTATGAGGATAACCATGCAAACAAGATGGTTCAGATACGACGGTTCCACACACTCAACTCCACCGGTATTCAACTTTCTCCAGGTGTTAATGATAGAGAGATCCTCCACTCCGACAATTTGCAAGACATCGGAGTTGAATGCATAGATGGATTGGCTTCAGTCCTGAACGAAGAACACTTTGAGATGTTTCAGGCAATTGCCAACAACACCAACAGGCAACCCTACCTATGCATCCGGCATATCGACAATAACAGCAATGTCAAGACCTTTGACATTGCACAACTGCAAGGGTATTCAGAACAGGAGATATTTAGAATAGTCTCAGGCACACCTCCCGTGACCGTGCATCCCGACGCATCTGAAGGCAGCAAGAACACACCAAGATCATCAGCCAGAGGTCATCATCATCATCGGACCATGGAGAACCCCACTGCTAGTGATGAGACCAATGTTCAGGCCACAACAATCAATGTCCTTGCACGCAATGCTGCACCAACAGAGTCTGCTTCTGCTCTGATAAACTCTGCCCTGGAGAAGTATCTTGAGCAGTACTTCTCTCATGGTTGCCTTGTGGAATGCCTAAGCCAGGACAGTGGCATTAGGGGCTGTTGGTTCATCGGTTCAGTGATTAGGAGGCGCGGAGATCGCATCAAGGTGAGGTACCAACACCTCCAAGATCCCGAAACGCCAAGAGCAAACCTAGAGGTATGTCACCTAATTTCAGTACCACTTCAGAAAATGTAGTTCGTTGCTGACAAATTTTATGGTGGCCTCTATTGGTAGTAGAATGAATGTACACCTTTTGTTCTTTCTTATTCATTGGACCATATCGATTTATACTACTATAGTAGAATATTTTCCTCTACTGATAGTAGAACTCATAAATTAACACTTGAGATGACTTATACGATTGATAATATTGATAGTAGAGCACTATTGTTAGAGATTCAATAGTAACTTCTACTGTTAATAATATGTTAGAGATAAGAGAGAATCCCTTATATGCCACTGAAAATTGGTCTGATCCCTTGTATGCCATTGAAAATTGGCTCTTCCCTTATATGCCATTGATCCAAATTTGCACACCCTCTTATGCCACTCCCGTTAGTTGACCGTGTGTTGACCGTTAATTCTCAAGGAAAAAAAACGTATTTACCCTTCTGAGTATAGGGCATGCCTAACAACTCAAAGAGGGCAAATATGTCTTTTTTACTTGAGAGTTAACGGTCAACACACGGTCAACTGACGGTAGTGGCATGAGAGGGTGTGCAAATTTGAACCAATGGCATATAAGGGAAGAGCCAATTTTCAGTGGCATATAAAGGATCAGACCAATTTTCAGTGGCATATAAGGGATTATCTCTAGAGATAATGTAGTAACTTCTAGTAGATTACTACCAGTAGAGCTATATATAAAATAAAATTCTTTCTTTTATAGTAACCAGACGGCAAGCTCCCACTCATGTCCATGAAGCTCACCTTGAGTTAAGGGTGCAAGCGGCTACCCGCGAAAACCCACTTATAAGCTAAACTAATCCGTGAACTCGCTTATTTTGACCTATAAGTGGGTTCACGGGTGACCCACTTGCACCCCTACCTTGAGTTGAGAAGGCTGACACGAATTGATTGTTCTCCTGCAGGAATGGTTGCTTGTGACAAGAACCGCTAATCCTGACACGCTGCGCATACGCCTCTCTGGAAGAACAAGAATTCGTCCCCACAATATGTCAGAGAGGGAGAACCCCTCTACGATCAGTGTTGGCACCGTCATTGACGGATGGTTGTATGATGGTTGGTGGGAGGGAATTGTGCTGAAGGTGAATGATGCAAGGAGGCTGCTAGCTTACTTACCAGGTGAATTGTCAGTTGATTACCTTCTTAGTGGATTCAAATTTAACAGTCCATGATGCAAATTCTTGCTTGTGTTTAGCTTGTTGCCATGTCAACGGAGTTCTTTCCCTCGTCTGAATTTGCAGGGGAGAAGAAGATGGTGCTATTCCGCAAGGATCAACTGAGGCATTCACTCGAGTGGATTGACAACGAGTGGAAGAATTTTGCTCACCGGGAAGATATCGCACGTCGAATCCCTAGTGCGGAAGATCTTAGAATAAGAGTCATTACTGCACGAGAAGTTCCTACAAGAGAAGAAGTAATGAAGCAATTGGAAGGCCTGAAAACAAACAAAGGTGGTTCAAACTCTGCAAAACCAGCTGCAGAGAAGGGAAGTAGCAGCTCTGCTACTAAGAAAACCACACCTGATCTCATTAGGCATGCAACAAATGATCTAGGATCTTCAAACTTCAAGCATGTCAGTGTTCCTGCCTCTGAAGAAATTAGAACTGATAACAAGGGATCGCAAGTTAATCTTGAAAATGTCCTGAAGTCGGACAGTCTAAAATGGACCGAGCATAAGGCTAGAGGATCTTTTGGTCCAAGAATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030735