Os10g0559600

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0559600| Description = Agenet domain containing protein| Version = NM_001071904.1 GI:115483403 GeneID:4349370| Length = 4562 bp| Definitio...")
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Gene Name

Os10g0559600

Description

Agenet domain containing protein

Version

NM_001071904.1 GI:115483403 GeneID:4349370

Length

4562 bp

Definition

Oryza sativa Japonica Group Os10g0559600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22479482..22484043

Sequence Coding Region

22479839..22479855,22479946..22480036,22481381..22482235,22482337..22482446,22482862..22482929
,22483510..22483690,22483939..22484041

Expression

GEO Profiles:Os10g0559600

Genome Context

<gbrowseImage1> name=NC_008403:22479482..22484043 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22479482..22484043 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttttagttcacaagggtgagtctggagtagcttggttttctgccaaagttcttgatataaacaatgatagtgcatgtatcagctacgactctcacactgaagaaactggtcttcgcaaagaatgggtgccattgagacaggaaggggagaaggcacctcaaatccgccttgctcatcctgcaactgtttctagatttaaaggaactaggaagcgccgtagggacacatcaggaaattactcttgggctattggtgatcatgtggacgtattgattgaagatagttggcgagagggaattatttctcgcaaccgtgatggtgatgaaacaaagcttaccgtacaattttcaggaaccagtgattccttagttgttgatgcttggaatcttcgcccatcacttgtttggaacgatgggcagtggatagagtggtcccgagggaagacggttgattgtaataagggtgattctcctcatgagaaacggcaaagaacaaaaggtaatgatcatgtacctattggtggagcagcagcaggcccttctatggatacgagcacaaatgctgcagcaaaaccagaggagccaaagccattggctttatctgatagggacatggttttcaacatcggaaagagggtagttgagagtaaaactgatggtgttgctttcaagcgacctggacttcggaaagaaggatcacgggtagttggtgttccaaaacctggaaagaagaaaaagtttatggaagtaagcaaacactatgatgcagatcaagctgataaaatttctgagggtaatgcatctaccagacctgtgaaacatttggtgccaaatgtgccaagaccacgggaaggtacttctaaagttgaccagaaaggaaagaggataggggagatgagatcgagagtacctaaatctacaaagtctcaggatggtgcaactaacatcattcctggcaagggacctttatccatgtctgccccaagcactggtgttttcgaaagtagtcatacatttataggaagtacaataggttcttccaacaacatgaacctctctgtagaaaagaatagttctgtccatggcgttggccttagatctgaagattcttctgtttctgaaccacacatccaagctgcatctgctgctcctacttccaggaagaatttaaccactactgatcgagctaaaaggaaacttgttccttctatggataattcgaacaggaccacaaacaaaacatctgaaattccagggaagagtgctgattctactgaacccagaaggtcgaaccgccgaattcaaccaacctcacggttactggagggtctgcagagttcccttatagtttccaaagttccaggcgaaaagggtcctaggactaactacagaagtgcttcctcaagagggcgaaaccttggctga</cdnaseq>

Protein Sequence

<aaseq>VLVHKGESGVAWFSAKVLDINNDSACISYDSHTEETGLRKEWVP LRQEGEKAPQIRLAHPATVSRFKGTRKRRRDTSGNYSWAIGDHVDVLIEDSWREGIIS RNRDGDETKLTVQFSGTSDSLVVDAWNLRPSLVWNDGQWIEWSRGKTVDCNKGDSPHE KRQRTKGNDHVPIGGAAAGPSMDTSTNAAAKPEEPKPLALSDRDMVFNIGKRVVESKT DGVAFKRPGLRKEGSRVVGVPKPGKKKKFMEVSKHYDADQADKISEGNASTRPVKHLV PNVPRPREGTSKVDQKGKRIGEMRSRVPKSTKSQDGATNIIPGKGPLSMSAPSTGVFE SSHTFIGSTIGSSNNMNLSVEKNSSVHGVGLRSEDSSVSEPHIQAASAAPTSRKNLTT TDRAKRKLVPSMDNSNRTTNKTSEIPGKSADSTEPRRSNRRIQPTSRLLEGLQSSLIV SKVPGEKGPRTNYRSASSRGRNLG</aaseq>

Gene Sequence

<dnaseqindica>4189..4205#4008..4098#1809..2663#1598..1707#1115..1182#354..534#3..105#aggttttagttcacaagggtgagtctggagtagcttggttttctgccaaagttcttgatataaacaatgatagtgcatgtatcagctacgactctcacactgaaggtgagtgtgcatttattcttttcacatgtccacatcgatgtggtgacgagcacttcttttccacaatgcaactataaggccttcgacatctatatagcggtgatacttcacaaaattgatctatcggttattcggtatcagatacaccatacacaatatctgtcctagtaatgctgacgctgatagtgatactttgagctacagtcaagtgttaagctgatcgagtattgggattgactaattttcagaaactggtcttcgcaaagaatgggtgccattgagacaggaaggggagaaggcacctcaaatccgccttgctcatcctgcaactgtttctagatttaaaggaactaggaagcgccgtagggacacatcaggaaattactcttgggctattggtgatcatgtggacgtattgattgaagataggtatgtcattcaacattctctagttctactatttttgtaggttaagggctggaagatggatgaggatggtatacttgtacatttgcctaaccaacctgatgccatttttgtgcttaaaatttggatgtctagaggtagaaataatcaaacatgtcttgtttttgtctcggagtgcataatgatttctgctatgtattagtttttctgttactgtatcagcatgttagtcccatgttgagtctgttgagacaattcccaggaggttaaaaatgtgaagtatatatgcaaggttcaaatcatgtgttttttatgtgaattggatgagggatgtgttcaaatcataggttgaaataccttactttttttttttgatatacttgtattttaaagttgatttccttttgttccattttcttcatttcctctgggtctgtttgcacataggttcttgggcatgtgaggtttgttgtttaagtctacctatgtaaccaatcccatcaattctaatttgatgtatcatcagtaactttttgttattagctccttttgatatgtaacctatttctttcttttcctgcagttggcgagagggaattatttctcgcaaccgtgatggtgatgaaacaaagcttaccgtacaattttcaggtatcatagtaatgtgatgtgctaaccagtaataatacaactatcatgaatgtcaggtgaactattgggatgtttggtttgtgtacgttgatccatcatggggatcgtttcatgattattgtgggatgacttaatgaatcaaattgaccatctcattcctcacttcaaactgaccctaacaagtgcatagccatatgaccgtgggatgctgccacctcagaattgaaactgatataccataaaattttcattgaaaaaactgttgatcttgattatttacaactctttctgctttcatattgatttatgtgattcatatcaaagcctatgtttccattttaactcgtgtattttgaattcttcaatggaggacctttaaccctttgttctgtgttgatcattttatatccagcaggaaccagtgattccttagttgttgatgcttggaatcttcgcccatcacttgtttggaacgatgggcagtggatagagtggtcccgagggaagacggttgattgtaataaggtggctttactttctagatatgctatttcctttttcaatcgaatgcctgatatattacttttgcacaattatattcaattaatagttttttatggtctcagggtgattctcctcatgagaaacggcaaagaacaaaaggtaatgatcatgtacctattggtggagcagcagcaggcccttctatggatacgagcacaaatgctgcagcaaaaccagaggagccaaagccattggctttatctgatagggacatggttttcaacatcggaaagagggtagttgagagtaaaactgatggtgttgctttcaagcgacctggacttcggaaagaaggatcacgggtagttggtgttccaaaacctggaaagaagaaaaagtttatggaagtaagcaaacactatgatgcagatcaagctgataaaatttctgagggtaatgcatctaccagacctgtgaaacatttggtgccaaatgtgccaagaccacgggaaggtacttctaaagttgaccagaaaggaaagaggataggggagatgagatcgagagtacctaaatctacaaagtctcaggatggtgcaactaacatcattcctggcaagggacctttatccatgtctgccccaagcactggtgttttcgaaagtagtcatacatttataggaagtacaataggttcttccaacaacatgaacctctctgtagaaaagaatagttctgtccatggcgttggccttagatctgaagattcttctgtttctgaaccacacatccaagctgcatctgctgctcctacttccaggaagaatttaaccactactgatcgagctaaaaggaaacttgttccttctatggataattcgaacaggaccacaaacaaaacatctgaaattccagggaagagtgctgattctactgaacccagaaggtcgaaccgccgaattcaaccaacctcacgggtaagttaatcaggaactaccgtcaagttataatggacatttgtttctttcttttggcaccgacttttactattatgtcactgaatgttggtaatacattctttaaagaactgtttactctgtagcacacaatttgtgtgtagttacgttgtagttggtctagcctttctcactagtcataatttggatgagtttatcagtatcatacaaacttttggcagttttttcttcagatggtttgagatacctgtgttcttttcttttgcctctgcacatgagtgtagttttttcttcagatggtttgagatacctgtgttcttttcttttgcctctgcacatgagtaaacacggctggtgcatgtgcgagcttgctgtgaaatttgtaggagtccatttgtttttgggaaaaattaactattttgccactcaatatagatgtatttaagaatttgccgctatgtagttgctaattaactgtttaccactcgagatgcacactcctaataaaacaccatcagtttatcccctaaatacccgtcccacttatttttctttctgttttgccctccggcgccataggctaatctctttgcttgcctcctcacgaaattgctgccttctgttcctccgcaatccccttgtggaaaccagtgatgggcaccgtcaccatcttggcgccagcaatcagcattaccttgctccaatttgtcctggcacaatgcgacttccatcgtaaatgtttctgttggcaagaacagggaagcaattcagctgtaaatcaaggcgtggaaagaatgcttattcctaaatgcttcgcatggctaagccaaaaatgctagaaaaatgaaaccagtcgaatggtaccaactgcttcagcagcttgatcgttgatattgttttgtcaggggcagtttccaatttagttgcctgaagaccttaggttgtgaccctatgtcttcgccagagtgctgtattgcgaccatgacgagaggcatcagggcactgttgcgttgcacgcgtggatggtagggagcaatgcgccactcatctggttcaaagtgggcctcgtatagttcaaagcgtgcaagctaagcggtatcaccaatggccaaaaccggaagaaaaatagatgggcttggtgtttaggtggtaaattgcaacgaacttccccgaagtggcattttattatagacatatggtacttgttaagtggcaaataataaattgccgaatatgtggtggcaaattattaattatgtctatgctgagtggataatagttgattttcctgttgttttattgagcatgccatttatgctaattttggttttgtgtttgcgacagttactggagggtctgcagagttcccttatagtttccaaagttccaggcgaaaagggtcctaggactaactacagaagtgcttcctcaagaggtgactcttctttttcgtgcttgtagataatttatggcccccattttccctctgaggcactgataatttgcaatctgtttggtgtaacagggcgaaaccttggctgagaaaaaggctttgctgcgctgttgttgggataattctcgttttgtacataactggttagctcgatggaggcaaaagaggataggattggagtaaagacttccccggagaagatgtgctcaggtgtattatatgctagcttaagttagtggggtttattttttggatttgtactggacacttgtgttatgtgatgtagagtagacattaatcatccaaaaaccaccgtttaatctgtatggatacagcgaaagagaaattggacacggtttaaactcatcgtctgtggtaaaccatttgacggatgtattaaccttctccgtccttttgtggaattgatggattgctaccttttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0559600, RefSeq:Os10g0559600