BGIOSGA030800

From RiceWiki
Revision as of 09:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030800| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030800, complete gene.| tag = P0689B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030800

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030800, complete gene.

LocusTag

P0689B09.5

Ensembl Transcript ID

BGIOSGA030800-TA

Ensembl Protein ID

BGIOSGA030800-PA

Length

3283

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14084291..14087573

Sequence Coding Region

14084291..14085618,14086967..14087275,14087414..14087573

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14084291..14087573 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14084291..14087573 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACGCTTGCCTTCTCATCGTCTCGCGGCTCTCCTCCTCCTCCTCCTCGTCGTGGTCTTGCCGTGTCACGCGGCGGCGGCGGCGGCGGGCGGTGGGCCGAGGGCGACTAGGCCGAAAGCCGTGGCGATGCCGGTGGGCAGGGACGGCGCGACGAGGCAGTACGTGGCGACGTTCCAGCAGCGAACGCCGCGGGTGGCAATGAAGGCCGTGGTGGACCTCTCGGGCGGCGCCACGCTCTGGGTGGACTGCGACGCCGCCGCCGGGTACGCGTCGTCCTCGTACGCCGGCGTGCCATGCGGGTCCAAGCCCTGCCGCCTCGTGGAGAGCCCCTCCTGCAGCTACATCGCCAGCTGCCTGGGCTCGCCGCCGTCTCCGGCGTGCCTCAACCGCACCTGCACCGGGCACGCCGAGAACACGGTCACGAGCTCCGTCGGCAGAGGCAACGTCGTCACCGACGTGCTGTCGCTGCCCACCACCTTCCCCTCGGCCCCGGTCCGGCAAGGGCCGCTCGCCACCGCGCCGGCGTTCCTGTTCACCTGCGGGCCCACGTCCCTGACCCAAGGCCTCGCCGCCGGCGCCACTGGCATGGCGTCCCTCAGCCGCGCCCGCCTCGCGCTCCCCGCGCAGCTGGCTGGCACCTTCCGCTTCTCCCGCAAGTTCGCGCTCTGCCTCCCTTCGGTCGACGCCGGCGTCGTCGTCTTCGGCGACGCGCGCTACGTGTTCGACGGCATGGACCACTCCAACTCGCTGCTCTACACGCCGCTCATCACCAGGACGACGGACAGGTCGAGCGAATACTTCATCAGCCTGAAGCGCGTCGTGGTGGACGACCGCGCCGTGCCGCTGAACGCGACGCTGCTCGACGTCGGCACCAAGCTGAGCACGGTGTCCCCCTACACCGTGCTGGAGACCTCCATCCACGAGGCGGTCACGCGCGCGTTCGCGGCGTCGATGGCCACGGCGGGGATCCCGCGCGTCCCGGCCGTGGCGCCGTTCGAGCTGTGCTACGACGGGAGCAAGGTGGAGAGCAGCGCCATCACCGGGGAGCCGGCCGTGCCGGTGGTGTTCGAGCTGTACGTGCAGAGCGAGGCGAGGTCGAAGGTGGCGCCGTGGATGGTGTCGGGGGCGAACCTGATGGCGCGCGCCGACGGCGGGGCGCTCTGCCTCGCCGTGGTGGACGGCGGCGCGGCGCCGGAGACGCCGGTGGTGATCGGCGGGCACATGATGGAGGAGATCCTGCTGGTGTTCGACCTGGAGAAGTCGCGGTTGGGGTTCAGCCCGAACCTTGGGGCCTTCGGCTTGTCCTGCAGCAAGTTTCGCCTCGGCTCATCAATTAGGCGTGTCAATGCCGTAGAGGCAAGAGTAGATGATCGGCGAGCTGGCGATGCGCATGTGCACTTCGCGCGCTGGTGTTGCGGAATAGGCCGACAGGTGTCCAGTCTCCTCCAAGCACTGAGCGTCAACCGGGTGAAGCTTTACGACGTCGACCCGGCCATCCTCGCCGCCTTTGCTGGCACGAACGTGGAGTTCATCGTTGGCAACGAGGACCTCAACAACCTGACCGACACGCGCAAGGCTCGCTCCTGGGTGGCGCAGCACGTGCAATCGTTCCTCCTAGCCACCTGCATCACAAGCTACTTGCCATCCGCCGGTGCATTTCAGGAGGACCACGCGCAGTACATCCAGCCATTGCTCAACTTGCATGCCGAGGTCGGCTTGCCGTTCCTCGTCAATGCGTACCTAATCTTGCTGGAGGTGGTGCCGCGGACGAGCGAGTCATCGATGATGCCGTAG</cdnaseq>

Protein Sequence

<aaseq>MARLPSHRLAALLLLLLVVVLPCHAAAAAAGGGPRATRPKAVAMPVGRDGATRQYVATFQQRTPRVAMKAVVDLSGGATLWVDCDAAAGYASSSYAGVPCGSKPCRLVESPSCSYIASCLGSPPSPACLNRTCTGHAENTVTSSVGRGNVVTDVLSLPTTFPSAPVRQGPLATAPAFLFTCGPTSLTQGLAAGATGMASLSRARLALPAQLAGTFRFSRKFALCLPSVDAGVVVFGDARYVFDGMDHSNSLLYTPLITRTTDRSSEYFISLKRVVVDDRAVPLNATLLDVGTKLSTVSPYTVLETSIHEAVTRAFAASMATAGIPRVPAVAPFELCYDGSKVESSAITGEPAVPVVFELYVQSEARSKVAPWMVSGANLMARADGGALCLAVVDGGAAPETPVVIGGHMMEEILLVFDLEKSRLGFSPNLGAFGLSCSKFRLGSSIRRVNAVEARVDDRRAGDAHVHFARWCCGIGRQVSSLLQALSVNRVKLYDVDPAILAAFAGTNVEFIVGNEDLNNLTDTRKARSWVAQHVQSFLLATCITSYLPSAGAFQEDHAQYIQPLLNLHAEVGLPFLVNAYLILLEVVPRTSESSMMP</aaseq>

Gene Sequence

<dnaseqindica>1..1328#2677..2985#3124..3283#ATGGCACGCTTGCCTTCTCATCGTCTCGCGGCTCTCCTCCTCCTCCTCCTCGTCGTGGTCTTGCCGTGTCACGCGGCGGCGGCGGCGGCGGGCGGTGGGCCGAGGGCGACTAGGCCGAAAGCCGTGGCGATGCCGGTGGGCAGGGACGGCGCGACGAGGCAGTACGTGGCGACGTTCCAGCAGCGAACGCCGCGGGTGGCAATGAAGGCCGTGGTGGACCTCTCGGGCGGCGCCACGCTCTGGGTGGACTGCGACGCCGCCGCCGGGTACGCGTCGTCCTCGTACGCCGGCGTGCCATGCGGGTCCAAGCCCTGCCGCCTCGTGGAGAGCCCCTCCTGCAGCTACATCGCCAGCTGCCTGGGCTCGCCGCCGTCTCCGGCGTGCCTCAACCGCACCTGCACCGGGCACGCCGAGAACACGGTCACGAGCTCCGTCGGCAGAGGCAACGTCGTCACCGACGTGCTGTCGCTGCCCACCACCTTCCCCTCGGCCCCGGTCCGGCAAGGGCCGCTCGCCACCGCGCCGGCGTTCCTGTTCACCTGCGGGCCCACGTCCCTGACCCAAGGCCTCGCCGCCGGCGCCACTGGCATGGCGTCCCTCAGCCGCGCCCGCCTCGCGCTCCCCGCGCAGCTGGCTGGCACCTTCCGCTTCTCCCGCAAGTTCGCGCTCTGCCTCCCTTCGGTCGACGCCGGCGTCGTCGTCTTCGGCGACGCGCGCTACGTGTTCGACGGCATGGACCACTCCAACTCGCTGCTCTACACGCCGCTCATCACCAGGACGACGGACAGGTCGAGCGAATACTTCATCAGCCTGAAGCGCGTCGTGGTGGACGACCGCGCCGTGCCGCTGAACGCGACGCTGCTCGACGTCGGCACCAAGCTGAGCACGGTGTCCCCCTACACCGTGCTGGAGACCTCCATCCACGAGGCGGTCACGCGCGCGTTCGCGGCGTCGATGGCCACGGCGGGGATCCCGCGCGTCCCGGCCGTGGCGCCGTTCGAGCTGTGCTACGACGGGAGCAAGGTGGAGAGCAGCGCCATCACCGGGGAGCCGGCCGTGCCGGTGGTGTTCGAGCTGTACGTGCAGAGCGAGGCGAGGTCGAAGGTGGCGCCGTGGATGGTGTCGGGGGCGAACCTGATGGCGCGCGCCGACGGCGGGGCGCTCTGCCTCGCCGTGGTGGACGGCGGCGCGGCGCCGGAGACGCCGGTGGTGATCGGCGGGCACATGATGGAGGAGATCCTGCTGGTGTTCGACCTGGAGAAGTCGCGGTTGGGGTTCAGCCCGAACCTTGGGGCCTTCGGCTTGTCCTGCAGCAAGTTTCGCCTCGGGTAGCGCGTACTGCATCGAGGCTAATCTGTACCCGCATTTTTGTAGTAGCGTGTTGGAATAAATTGCTCATGTACCATTGAGCACAGCTATTGTACTTTGTCCGTGGTAAACATGCAAATGCAAATACAGCACTGAGCTCGCAGAGAGACCTGCTAATACGGAAGGGTTTCCCTTACCGCCGGTAACCGTGGTTACCGCGGTTACCGGACTTATCATGGGGTACGGTAATATAAATACCGCAATAACCATCTTAAATTTAAATAAATTTAAAAAATAATTTAAATTTTTGATAAATTTTGTATGGTTTTGTACGATTTTTAACGGTTACCGCGCAATAACCGTGCTTACCGCTGGGGCGCGGTAACCCCGGTCCTGGCGGTTTGGAAAACCCTGAGTACGGTACAGCATTTGACCAACAAGTGACAGAGAGCTCGCAGGGAGTAGTAAACGAGTCATTATAAACTGAACGTAGGACTTGGTCATGTAAAACAATGATGAACAAGTATTTTGTTTAGCAACACATCATTGAGTAAAATTTTAACAGTGTATTGTTACGATGAATCAGTATGCATAAAAGAATTATCCACTGATAACAGAGCACCGCCATCCTCCTAATTAGACATCAATACATATCAGAAATCAACAATCGAAATCAAAAATCACATCAGCACCGATCAAGAAGAACAACGAGTGAAGAATGATGACCGTAGGCCATCCCAGACATAGGCGAATCAAAAATCAACAATTAATAATCACAACGATAATGAAATCGACGATGATCGGAAGCACAAGTGGCTAAAGCGTACTCCCCCATCTCAAAGAAAAAAAAACCTAGGATGAGATACGACACAATCTAGTATAACGATACTAAACAAAGGATGAGATATGACGCAATCTAGTATAACGATACTAAACAAAGGTCTCAAAACATACAACTTAGAATGGGATGTGACACAATTTAGTACAACGTTATATTGGATGTGATTGTACTAGATTATGTCACATCCCATTGTAGTTTGTTTTTTTTGTAGTTTGTTTTTTTTACAAAGGAAGTAGTCTGGAGGCGGCCCAGTGAAGAACTGAAAATACCACAGTAATTGCTAGGCCGGTGAGCGACAGAAGCAGCATGGCTTCCCTAGAGAAAATTGACATTTGTCCACGTTCAAAACATGGTTTTGCTGGAAATGCTGTCCTGAAAATGAGATTCGATAAAATGCCAACATGAAACGTGTGTCTATCGTCACTTTGCCATTTTCGCCATTTTATTCATTTCCAAAAATATTTTTGCTCTTTCGCGAGTGATGAGACGGAATTGCCCCATATCACTCTGTTGCGTTGATATTTTAGCTCATCAATTAGGCGTGTCAATGCCGTAGAGGCAAGAGTAGATGATCGGCGAGCTGGCGATGCGCATGTGCACTTCGCGCGCTGGTGTTGCGGAATAGGCCGACAGGTGTCCAGTCTCCTCCAAGCACTGAGCGTCAACCGGGTGAAGCTTTACGACGTCGACCCGGCCATCCTCGCCGCCTTTGCTGGCACGAACGTGGAGTTCATCGTTGGCAACGAGGACCTCAACAACCTGACCGACACGCGCAAGGCTCGCTCCTGGGTGGCGCAGCACGTGCAATCGTTCCTCCTAGCCACCTGCATCACAAGGTGCACTCCGGCTAAGAGACGGCGGCGATGCAGAGCCTCCTCCCCGCTATGCAGTCTGTACACCAGGGCTGCTTGACCTCGGCTCGTCGGCAAGGTGAACGTCTCAACGGCATACTCTGTCAATGTCCTCGACACCAGCTACTTGCCATCCGCCGGTGCATTTCAGGAGGACCACGCGCAGTACATCCAGCCATTGCTCAACTTGCATGCCGAGGTCGGCTTGCCGTTCCTCGTCAATGCGTACCTAATCTTGCTGGAGGTGGTGCCGCGGACGAGCGAGTCATCGATGATGCCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030800