BGIOSGA030801

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Revision as of 09:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030801| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030801, complete gene.| tag = P0689B0...")
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Gene Name

BGIOSGA030801

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030801, complete gene.

LocusTag

P0689B09.13

Ensembl Transcript ID

BGIOSGA030801-TA

Ensembl Protein ID

BGIOSGA030801-PA

Length

3100

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14101604..14104703

Sequence Coding Region

14101604..14101673,14101766..14101887,14101977..14102098,14102205..14102400,14102531..14102623
,14103053..14103112,14103216..14103290,14103807..14103887,14103998..14104339
,14104647..14104703

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14101604..14104703 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14101604..14104703 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGGCCGCAAGCCGCCGTCGCCGCCACTCTCGCCGCCGTCGCCGCTGCCGCCGCCGTTCTCTCAAGCCAACTCTACAGGCGGAGGTGCCGTCGGTTGGCGTCGAGGGTCCGGGAGCTGGAGGCCTCGCTTGCCGCCGCCACAGAGAAGGCCGCCGCCGAGCGCCGCGGTAGGGTTCGGGCGCAGCAGTCGCTAAGGAAGGCTTTGAGCGAGCAAGAGCTCAGCTCGGATGAGAAGAAGAAGCTGAGCAAATCCCCCAAGTCGTTCCCCATGGCTTCGATTGGTGTCGTGCAGTCATGCTTCTCCACTAGGAATGGGACGCCGAGGCAGCCTTTGGTGGTGCCACTTGCCAGAGCAACCGTGGTGCTTGATCCAGCCCGTGTCCCCGCGGAAGCGCTCGAGGGTCTTGCAGATTACTCGCATTGCTGGATCCTCTATGTGTTCCATCTGAACACTGACCTTGATAAAATGTGGAATGACCCTGCTAGGTCCAAGCTAAAAGCAAAGGTGAGAGTACCTAGGTTGAAAGGGGGCAAGATGGGGGTTCTGGCAACTAGATCTCCACACCGGCCTAATCCAATTGGACTCAGTGTAGCGAAGGTTGAGGCGGTGGATGGACATTCAATTTTGCTTTCTGGAGTAGATTTGGTTGATGGCACGCCTGTGCTTGATATCAAACCATATCTTCCATATTCTGATAGTGTTAAAGGTGCAGCCATTCCAAATTGGTTGGAGGTTGATGGTGCATTAGCTGTGGAGTCTATCCACTTCTCTGAGCACTTCATTTCTGCACTTTCTGATTGCTGGATGCATGTACAAAAGCAATCGCTCTACGCTTCAGCAGATGAGTTTCAGGATCTTGTCAAGGAGGTTCTCTCCTGGGACATCAGGTCACTGTCTCAGCGGATCCGTCCCCATGAGGTAACCATAAAAGATGTCACTGATAATGGCAGGAGCAAAATTGACAACGGTTGCAACAACGATGAGGATCGCCAATCCGTTGATTCGTCCACAAGCGTGGTCTACCACCTTCATCTAGAAGGGATTGATGTGTCATACAGAATTGACCAAGATTCCAACATTGTTGTCGAGAATGCAGCGCTTCTTTCCAGTGCTGTGAACCAACACCAGTACAACTACTTAACATGGAGGGAAAAGGTGGCGATTCGGCCTAATCCAATTGCGCATAGTACTCTATGTCCTCGGCCCATCTAA</cdnaseq>

Protein Sequence

<aaseq>MARPQAAVAATLAAVAAAAAVLSSQLYRRRCRRLASRVRELEASLAAATEKAAAERRGRVRAQQSLRKALSEQELSSDEKKKLSKSPKSFPMASIGVVQSCFSTRNGTPRQPLVVPLARATVVLDPARVPAEALEGLADYSHCWILYVFHLNTDLDKMWNDPARSKLKAKVRVPRLKGGKMGVLATRSPHRPNPIGLSVAKVEAVDGHSILLSGVDLVDGTPVLDIKPYLPYSDSVKGAAIPNWLEVDGALAVESIHFSEHFISALSDCWMHVQKQSLYASADEFQDLVKEVLSWDIRSLSQRIRPHEVTIKDVTDNGRSKIDNGCNNDEDRQSVDSSTSVVYHLHLEGIDVSYRIDQDSNIVVENAALLSSAVNQHQYNYLTWREKVAIRPNPIAHSTLCPRPI</aaseq>

Gene Sequence

<dnaseqindica>1..70#163..284#374..495#602..797#928..1020#1450..1509#1613..1687#2204..2284#2395..2736#3044..3100#ATGGCGCGGCCGCAAGCCGCCGTCGCCGCCACTCTCGCCGCCGTCGCCGCTGCCGCCGCCGTTCTCTCAAGTAATAATTCCCCCGGTGCTCCCTTTGCCTCTTAGCTTTACTTTTGAATACTTCTCTCCTCTTCCTCACCGCCGGCGCACCTATCTCCACAGGCCAACTCTACAGGCGGAGGTGCCGTCGGTTGGCGTCGAGGGTCCGGGAGCTGGAGGCCTCGCTTGCCGCCGCCACAGAGAAGGCCGCCGCCGAGCGCCGCGGTAGGGTTCGGGCGCAGCAGGTCGCAATCCGTAAATCTCGATACCGCGTTCACGGCCTTCAAATTTTGCACGTTTTCCCCCCGTTTTTGATTAGTTTTTCTACTTGCAGTCGCTAAGGAAGGCTTTGAGCGAGCAAGAGCTCAGCTCGGATGAGAAGAAGAAGCTGAGCAAATCCCCCAAGTCGTTCCCCATGGCTTCGATTGGTGTCGTGCAGTCATGCTTCTCCACTAGGTGGCGCCATCTCTTCACTTCAGCCAATTCGTTGTGCTTTGTAGGATTCGGTGAACTTCTTGAGTAGTAAGAATGTAAGACAGTAAGAGTGAGTGATTTTTTGCAGGAATGGGACGCCGAGGCAGCCTTTGGTGGTGCCACTTGCCAGAGCAACCGTGGTGCTTGATCCAGCCCGTGTCCCCGCGGAAGCGCTCGAGGGTCTTGCAGATTACTCGCATTGCTGGATCCTCTATGTGTTCCATCTGAACACTGACCTTGATAAAATGTGGAATGACCCTGCTAGGTCCAAGCTAAAAGCAAAGGTATGATATGGAGTTAATGCTTAATGCTTAGTTGGTTACTTTTATTCCTTGATGAAAAATGATTCTTTGGCATGTTATTTGGTTTGTGGATAAAGGGCTGAACTATCAAACCTTTCTTTTGCTGTGGAAGGTGAGAGTACCTAGGTTGAAAGGGGGCAAGATGGGGGTTCTGGCAACTAGATCTCCACACCGGCCTAATCCAATTGGACTCAGTGTAGCGAAGGTATAGGATCCAAACCTGCCTTCCTCTTATTTTCTATGCAGCCTATGCAACGAAAAGTATAATCATAGTCTATGAAACTGAAGGTAAAAGTGTAATTTGAAACAATTAGCATCATTCATACTTTGGCATTGGTAGCAATCATGCACTCCAGACAGTTTTTAACCTGAATGATGATAGCTACCATTAACAGTATTTGTTATTGTTTCAGTTAAGTTTTCCACATGGATTCTATCCGACCAACACAAACTAGTCTGGACTCTGACAGTCTGACATCAATTGGCTTTATATGAATGGAATTACCTGCCTCCGAATAACTATATTAATTAATAGAGTGTGAACATTGTTATTTGCATTGGACTATTATGTATGTGTAATAATCATGTTTAGCATACCAACTTGTCTTCAATATTTTGCTTCAACGCTTCACAGGTTGAGGCGGTGGATGGACATTCAATTTTGCTTTCTGGAGTAGATTTGGTTGATGGCACGGTACCATATTAAGTGCTTATGTTCTCCAGCAGTACATAACTAATTGACATGATTCAGCATGTCTCACATGAACCTTCCTAATACACTGCTCCTCTATCTACAGCCTGTGCTTGATATCAAACCATATCTTCCATATTCTGATAGTGTTAAAGGTGCAGCCATTCCAAATTGGTTGGAGGTACTCACTACACCACATCTTTGTTTCTGGCATGCTCTTGTTTTTTTACAATTAATTTGTATAACTTTTTTTTCTAGAAAAATGTTCCTTCTGTTCATTTGATTATTTCTTCTATCTATGGACAAGGGGCACTGATCCAACGTGACTGGAAATATTTATAGCTTGGTGCTTTATCCTTAGGAAGTTGCACGTATTTTTGTTCTTCAGAAACTTATCCTCTGTGAAATTGTAGGTAGGACTGAATCTTGAGAATCAATAGCTCTATTTTGTTTAGTTATCGTGGGCTGAAAGCTCACTTGTTCAGTTGTACTGACTGCTGACTGAATGTCATAGAAAACTTTTCTGTAGTCTTGTTGAAGTACCATCCTATGGCTTATTTGCTACTTAGAGCCATCTTGGCAGCATGCTCAATTGTTTATCTTATGAGGCAGCACTGCAAATGGGCTTACTCTTGGATTGCTAGGAGCCTAGGATTGTCTTCCGCCTACTAATTTCTTGTATATTTTTCCCAAGCAGGTTGATGGTGCATTAGCTGTGGAGTCTATCCACTTCTCTGAGCACTTCATTTCTGCACTTTCTGATTGCTGGATGCATGTAGTAAGTAAAATATGCTGCTTCTTTCTGCAGTGCAAGATGTTACATTTTTATGTCAGCTGAACAGCAAATTAGAACTTTTAGCTTACAGTCTTAAGCTTTCTTTGCTTCAGCAAAAGCAATCGCTCTACGCTTCAGCAGATGAGTTTCAGGATCTTGTCAAGGAGGTTCTCTCCTGGGACATCAGGTCACTGTCTCAGCGGATCCGTCCCCATGAGGTAACCATAAAAGATGTCACTGATAATGGCAGGAGCAAAATTGACAACGGTTGCAACAACGATGAGGATCGCCAATCCGTTGATTCGTCCACAAGCGTGGTCTACCACCTTCATCTAGAAGGGATTGATGTGTCATACAGAATTGACCAAGATTCCAACATTGTTGTCGAGAATGCAGCGCTTCTTTCCAGTGCTGTGAACCAACACCAGTACAACTACTTAACATGGAGGGAAAAGGTAAGCATTTTGTAGGAGCATATATTAGAGCTCATTATCTAAAAGAATATATTAGAGCTCATGCTACTTATCATGGAGTAAATCTGTACGCAGCCTTATGAAAATCTAGCTTTTCTCTTTCAAAAGAAGAATTTGAGAGTGTCTCTCTTTCATAAAGAATTTGGCAGTGTGGAATTCCTGAAGTGAGTGTATTCTTGCCAATTTTTCCTCCTTGCTGGTGATCTCTAAATTTCTTGTGCTCTGTCGGGTTTCCTTGACATGTATAAAACCTTGGGCTTCCTCTGTAAAATGGACCACCTGTTTGCAGGTGGCGATTCGGCCTAATCCAATTGCGCATAGTACTCTATGTCCTCGGCCCATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030801