BGIOSGA030815

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Revision as of 09:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030815| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030815, complete gene.| tag = OJ1081_...")
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Gene Name

BGIOSGA030815

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030815, complete gene.

LocusTag

OJ1081_G10.17

Ensembl Transcript ID

BGIOSGA030815-TA

Ensembl Protein ID

BGIOSGA030815-PA

Length

5592

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14463165..14468756

Sequence Coding Region

14463165..14463215,14463351..14463401,14464966..14465016,14465121..14465186,14465283..14465344
,14465849..14465927,14466049..14466153,14466242..14466352,14466702..14466839
,14467031..14467105,14467222..14467342,14467407..14467561,14467818..14467892
,14468344..14468547,14468640..14468756

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14463165..14468756 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14463165..14468756 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTACAACCATTCGCCGTCCATCACCGCAGAGACCATAAACCAGAAGGTCAGGATCTTCACCTACGAGCCATGTGGGGAGATTGTCCGCCACGCACGGCGGTTAGAGAAGGAGATATACGAAAATCCAGGCTCTCTCCCTTTTCAAGAGATAATATACTGCAATCTTGGGAACCCTCAGGCTCTTGGCCAACGACCAATCAATTTCTTTCGCGAGGTTCTTTCTCTGTGTGACAATCCATCTCTCATAGACAGAGACGAAGCTCGTGCATTATTCAGTCCATGTGCGCTAAAACGAGCCAGGAAGATTATTGAATCACTTCCAGGCAGAGATTCTGGTTCCTATACTAGTAGTCAGGGAGTCAGAGGTTTGCGTGAAGCAGTTGCTGATGGAATAGCTGCCAGAGATGGTTTTCCATCAAAACCAGATAACATTTTTCTGACAGATGGAGCAAGTTCAGCAATCAACATGATGATGCAAATACTCATCAGGTCCCATGAAGATGGCATTTTGTGCCCGCTGCCTGAATATCCCTTATACTCTGCTTCTATTATTCTTCATGGTGGAACAATGGTACCGTATAATCTTACTGAAGACAGTGGGTGGGGGCTTGAGATTTTCGAAGTCAAGAGGTGTTTAGAGGACGCCCGTGCATCGGGTTTGACTATTAGAGCTATGGTGGTCATAAATCCCGGCAATCCTACTGGCCAGGTACTGTCTATAACCAACCAGGAGGAGATTGTGGAATTCTGTAGGAAAGAAGGGTTGGTTATTCTTGCTGATGAGGTATACCAAGAAAATGTCTATACAGAGAATAAGAGGTTCAATTCCTTCAAAAAGGTGGCCAGATCACTTGGTTATGATCACCATGACCTCTCTATAGTGTCATTTCACTCGGTCTCTATGGGATACTATGGAGAATGTGGTAGAAGGGGAGGCTACATGGAGATTTGTGGTTTTGGAGATGATGTGATCGATGAGATGTACAAGTTGGCTTCTCTAACTATTTGTCCCAACATAGCTGGCCAAATCCTTATCAGCCTTGTTATGGATCCACCTAAGCTAGGGGATGAGGCTTTTGAGATTTTCATGGTCGAGAAGGAAGAGACTTATTCATCTCTACTCAAGCGCGCAAAGGCTTTGCAGAAAGCGTTCAGCGGTTTGGAAGGCGTGTCGTGTAACAAGTTCGAGGGAGCCATGTACCTCTTCCCACGGCTGCGCCTGCCACAGGCGGCGATCAAAGCGGCGCAGCTGGAGGGCGTCTCCCCCGACGTGTTCTACGCGCACCGCCTGCTCGGCGCCACGGGGATCGCCGTCGTCCCAGGCTCTGGATTTCACCCAGTCTCCGGGACATCGCACATCCGGTGCACCATCCTCCCCGGCGAGGAGACGATCACGGCGATGGTTCCCCGCCTCCAGGCGTTCCATGAGGCGTTCATGGACGAGTTTCGCGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSYNHSPSITAETINQKVRIFTYEPCGEIVRHARRLEKEIYENPGSLPFQEIIYCNLGNPQALGQRPINFFREVLSLCDNPSLIDRDEARALFSPCALKRARKIIESLPGRDSGSYTSSQGVRGLREAVADGIAARDGFPSKPDNIFLTDGASSAINMMMQILIRSHEDGILCPLPEYPLYSASIILHGGTMVPYNLTEDSGWGLEIFEVKRCLEDARASGLTIRAMVVINPGNPTGQVLSITNQEEIVEFCRKEGLVILADEVYQENVYTENKRFNSFKKVARSLGYDHHDLSIVSFHSVSMGYYGECGRRGGYMEICGFGDDVIDEMYKLASLTICPNIAGQILISLVMDPPKLGDEAFEIFMVEKEETYSSLLKRAKALQKAFSGLEGVSCNKFEGAMYLFPRLRLPQAAIKAAQLEGVSPDVFYAHRLLGATGIAVVPGSGFHPVSGTSHIRCTILPGEETITAMVPRLQAFHEAFMDEFRG</aaseq>

Gene Sequence

<dnaseqindica>1..51#187..237#1802..1852#1957..2022#2119..2180#2685..2763#2885..2989#3078..3188#3538..3675#3867..3941#4058..4178#4243..4397#4654..4728#5180..5383#5476..5592#ATGTCGTACAACCATTCGCCGTCCATCACCGCAGAGACCATAAACCAGAAGGTACGTGGCTACGTGCGTCGTTGCGTTCCTCCGTCGATCTGAACCTCAGCTCGCCATCGATCGATCGATCGATGGCTAGCTCGATCGAGTTTTATTAACTGATCAAATATGTGCGCATTCTCATTCGTCTTGAAGGTCAGGATCTTCACCTACGAGCCATGTGGGGAGATTGTCCGCCACGCACGGGTAACTATAAATCTCATCAACCTACACTGAGGGCAAAGCCAATGTTTGAAGCTTACAATTACCTTGAGATGAGACCCATAAATAGTTAATTTTTGTTGTAGTATGTTATACGATACTTATGATCATAAGATAAGGGCAATGTATACGGGTTAAGTAGTCCTTATGGTACGGTTAGGCCCTGTCACAATAGACTTCAGTTATCTCTATTTCTATCGCTACAAACATGGGATGGGAATCATGGGACCCACTAACAAATAAAAATGTACTCCCTCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGCATATCTTTGACTGTTCGTCTTATTCAAAAAAAATTGTGAAATATGTAAAACTATATGTGTACATGAAAGTATATTTAACAATGAATCAAATGATATGAAAAAAATAAATAATTACTTAAATTTTTTGAATAAGACGAATGGTCGAACACGTACTAAAAAGTCAACGGTATCAAACATTTTGAAACGGAGGGAGTAGTAAGTAACATCAAACACAAAAGATGAAGAGGGGAGCAAAGGAGAGAGATATTCTTATTTCTTATGGGTAGTCGTTAGTTACTCCATGGATAGCTCATGCTATTGACTCCCATAAAGACTCCTTCCACAATATATACATCGGTACATTGAAACATGAGCTCACTACATACCCTATCTTATTATAAGTTGATGTCCAGTATCTCCTAAAATTCAACATGTAAGTGTGCCATATCATTACCACTAGTAAAATATAACCTTTCAGTGATGGTGGGAGTATATATGGCCAAAAGGCCTGAGGCCCGACGGGCCGCCCCACGGCACAACATTTTGGCCCGTGCCTCCCCCCCCACCAACCGGCACGTTGGGCAAGCCTAGGCCAGGCCCGACACACAAAGAATAGGGAGTAAAAATAGACATATTATATGCCACGGTTCAAGAATAGGGACGCAAAATATAGTTATTTTAGCTATATATATGTCAGCCTAAAGAGGAGGGAGAAAAAATAGACTTATTTTATGTCACAGCCCAAAGAGGAGGGAAGAAAAATAGATTCATTTAAAAAAAGGCATGATGTGCCACCCGTGCCTTCGGGCCGGCACGGCATGGCCCGACTACTGGTGGGCCGTGCCTGGGCCGGAGGTGCAGCCCATGAGCCGGCACGGCCCGGCACAAAGTGCTGACCGGGGCCGTGCCGGCCCGATGGCCGGTGGGTCATGCCTAGCCATGCCTGGGCCGGGCCAGGCTAGGCGGGCCTTATGGCTATCTATAGGTGGGAGAGAGCAAAGGAGTTGTCTTTTCGTTAAGTAGCGCTAGATTAAATTTATCTCAGATTCCAATTAGCCATCCTCCAACCCCATTGCATGCATGCTGAGAAGGTTGTTGCATGCAGAGTACAGATCGAAGGAGTTACTTAAATAAATACTGTCGGTTAAAGTTTGAGAAAAAAAAAGTTAACTCCATTTGATACTTAAGAAAAAGAGAGATTGAAAAAACAGAGGTAATAGCATATATGTTGTTTTATATCCTCTTTTTGCTAATACTCTACTCCTATGCGTCAACCAGCGGTTAGAGAAGGAGATATACGAAAATCCAGGCTCTCTCCCTTTTCAAGAGGTGTGTTCAAGCTTGCAATACAAATGTGTTTCTGCACATACATGTAGTAGTACTATAGGTACATGAATGTTTTGTAAGTGTGCAAATTGATTGCTTCCCAGCAGATAATATACTGCAATCTTGGGAACCCTCAGGCTCTTGGCCAACGACCAATCAATTTCTTTCGCGAGGTTAGCATTCTTAAACTCCCTACATTCCAAATTGATTCAACAGATTGTACGTACATTTCTGCTTGATGGCTTGATGGCTCCAATTATTGCGTTTAGGTTCTTTCTCTGTGTGACAATCCATCTCTCATAGACAGAGACGAAGCTCGTGCATTATTCAGGTTGGACCAAATAGACAAACAGTATAACCTTACTTTCCCTATGTAAATTTCCAAAGTTTTAGCTTTGTACAGTCTTTTTCCCACTATATTCAATGAAATGGGCACAGTCTGGTGCCGATTCGTTTTAAAAAAAACTTAGCATGTGCTCTCTCCATTTGATATTGTAAGACATTTTTATTTTTTTTCTAAGTCATTTTTTTAAAACATTAACCAAGTTTATGAAAAAAATGTGATAGCATTTTCAACACAATATAGATATAGTATCAAAATATATTCAATGCTAGATTTAGTGAAACTAATTTGGTGTTTGTAGATGTTGCTATGTTTTTCTATGATATGGTTAAACTTAAGGAAGTTTGATTTTTAAAAAAGTCAAAATGTCTCATAATATAAAACGGAGGGAATATATATAAAGCGTTGCAAATTTTTTTTCACTTCTTGTGTGGCAATAAATTTTTGGCCTAAAAAGAAAATGACTGACATTCTTTCGATCTACAAATGCAGTCCATGTGCGCTAAAACGAGCCAGGAAGATTATTGAATCACTTCCAGGCAGAGATTCTGGTTCCTATACTAGTAGTCAGGTACTGTAAATACATGCTCCTTATTTACAAATAACAAAAAAAAAGTTTTTTACTTGGCGTTGTCCTAGGATGATTTTTAACCTTTTTCATTGTGCATTACACTTGTTATTACATATATCAGGGAGTCAGAGGTTTGCGTGAAGCAGTTGCTGATGGAATAGCTGCCAGAGATGGTTTTCCATCAAAACCAGATAACATTTTTCTGACAGATGGAGCAAGTTCAGCAGTAATGCTCTGCATTTCCAAGCTCCATTAGTACAGAATGATGCTTGGTCTATCTGGATATCTTCAACTTAATTACCCTCCTTTTTCAGATCAACATGATGATGCAAATACTCATCAGGTCCCATGAAGATGGCATTTTGTGCCCGCTGCCTGAATATCCCTTATACTCTGCTTCTATTATTCTTCATGGTGGAACAATGGTACGGTGCTAGCATTTGGATTTTTCGAGAAAGTGTCCATTGATATGCCAATGGTATCTCAAACTTCCAATAACAACTTGGAGTATCATGCCAAAAAAAAAAAAACACGGAGGGCTAACCTCACCTTATACAGTTCTTTTTCCTTTTTTTAATGTTTCTTCCCTATTTCTTATTTTATTTCCCTTTTGCCTTTTCGCAGTCTCTTTTTGAACTCTTTGACTCACCATCATTACAATGGTTATAAGTTAGAGTATGCACCTTTTCCACGTCCGAAAAACACTTCCAAGTGGATGAATGTTCAAGTGTTATTATATGCAAGAAATAACGAAGGATCTAAATTGAATTGAAGGTACCGTATAATCTTACTGAAGACAGTGGGTGGGGGCTTGAGATTTTCGAAGTCAAGAGGTGTTTAGAGGACGCCCGTGCATCGGGTTTGACTATTAGAGCTATGGTGGTCATAAATCCCGGCAATCCTACTGGCCAGGTGTGCTGAATATTTTTTATTTTATCTTACAGTTTCATGACTTGATAGAATAATGAAGGAAAATCAAAAGATTTCTCGAGAATTACTGCAACCTATATCCTATATAGCACCACATAATGCTAGTAAGTATCTAACTGTTATTCAGGTCATTAAAGAAGTTTCTTGTTCCACATTTGCAACCCTTGTTGTAGGTACTGTCTATAACCAACCAGGAGGAGATTGTGGAATTCTGTAGGAAAGAAGGGTTGGTTATTCTTGCTGATGAGGTTCACACTTGCTGATTGTTTGATATTTCAAATTAGATTCATCGTGTTGAAAAAAAAAAACTCGGTTATATCGAAGGTAATTGTCTTGCAGATTAGTGATGTAAATGCATTTACAGGTATACCAAGAAAATGTCTATACAGAGAATAAGAGGTTCAATTCCTTCAAAAAGGTGGCCAGATCACTTGGTTATGATCACCATGACCTCTCTATAGTGTCATTTCACTCGGTCTCTATGGGTAAGTCTTCATGTCAACCAGAGTATCTTCCAAAAATTTGTCTTCTGATTTCTGAATTTTGCAGGATACTATGGAGAATGTGGTAGAAGGGGAGGCTACATGGAGATTTGTGGTTTTGGAGATGATGTGATCGATGAGATGTACAAGTTGGCTTCTCTAACTATTTGTCCCAACATAGCTGGCCAAATCCTTATCAGCCTTGTTATGGATCCACCTAAGGTTTCCCAAAAGATGCTTTCGCTACAATTTTCATCTTTAGCATATTAGTATCTTCACAATCTGGTTGTAAAATAGAAGTACTTTGACGGAGGTTTGCTGAACTTTTTTATCCTTGTGAAGTTCTCCCTTTGACTCTTGCCTATAAAATTTAAGAAACAGAATGTTTTTTTTTAGTTTATAGGAGAACCATAGAGAACTTATTACACCTTACACCTTCAAACTTGTGTTTTAACTGACTTGTGGGTGAGATTTGCAGCTAGGGGATGAGGCTTTTGAGATTTTCATGGTCGAGAAGGAAGAGACTTATTCATCTCTACTCAAGCGCGCAAAGGTCAGGAACAAAATACACATATCAGCAAATTTATATCAGATATATCCAATTTGCATCACACAATGTCGAAAACCAGAATTTGTGTGCTAGAAAAAAAAATCCTCTTCTCCCACCATGATTAACCCGCGTGTGTCATGGTTTGAAACTTCGTTTCGAAATTTCCGAAATTTCGGTAATCCCCCCCCCCCCACCCCCACCGGCAAGCTCATATCTCGCCCAAAATTTTCGGATTTTTTGCAGATTTTTGTGAATTTTATTCAAATTCATTCAAAATTTCAAATAATTTCGGTCAAAAAAATTCGAAATTTCCGAAATTTCGGTCCCCCCCCGGCAGAAATAGCAATTTAGAAATTTAAAACCCTGGCGTGTGTGGGTAAAGCGAGTGCGGTGTGCGTCCTCCTTATATTTAAGAAAAATATTCACGTCGATTTAATTTTAACCTACCCTGTAGGCTTTGCAGAAAGCGTTCAGCGGTTTGGAAGGCGTGTCGTGTAACAAGTTCGAGGGAGCCATGTACCTCTTCCCACGGCTGCGCCTGCCACAGGCGGCGATCAAAGCGGCGCAGCTGGAGGGCGTCTCCCCCGACGTGTTCTACGCGCACCGCCTGCTCGGCGCCACGGGGATCGCCGTCGTCCCAGGCTCTGGATTTCACCCAGTAACCCACCTCTTTTTCAGAGAATTTTTCCTTTTTGTCTCAAGCTGTGCATGCATTTGCCTGACTAGGATTTGGTCTCCTCCTGCAAAAAGGTCTCCGGGACATCGCACATCCGGTGCACCATCCTCCCCGGCGAGGAGACGATCACGGCGATGGTTCCCCGCCTCCAGGCGTTCCATGAGGCGTTCATGGACGAGTTTCGCGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030815

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030815&oldid=30019"