Os10g0560200

From RiceWiki
Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0560200| Description = Protein of unknown function Cys-rich family protein| Version = NM_001071909.1 GI:115483413 GeneID:4349375| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0560200

Description

Protein of unknown function Cys-rich family protein

Version

NM_001071909.1 GI:115483413 GeneID:4349375

Length

3474 bp

Definition

Oryza sativa Japonica Group Os10g0560200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22517642..22521115

Sequence Coding Region

22517902..22518096,22518512..22518777,22520624..22520738,22520871..22521002

Expression

GEO Profiles:Os10g0560200

Genome Context

<gbrowseImage1> name=NC_008403:22517642..22521115 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22517642..22521115 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggaggaggccggcctcggccacccgtcgaggtacgtgcagctgacgagggaccaggacgcgcccgccgacgaggacatccgccccggcgagctcaacctgccggcccacttcccgcagctggagcagaggaggtgctgcgagtgcgggcagcagctgccggagagctacgaggcgccggcggacgagccgtggaccaccggcatctgcggatgcgccgaggacaccgagagctgctggactggatcattcttcccttgtgtgctgtttggacataatgttgaggccctaagagaagatatcccatggactacaccttgcacttgccatgctgtttgtgttgaaggtggcattgcattagcaatcctaacagtgatatttcctggtattgatccaagcacatcaatcttgattggtgaaggactggtgtttagttggtggttatttgctacctatactggaatttttcgtcaacaactccagagaaaatatcatctcaaggattcaccgtgtgatccttgcctggtccattgctgcctgcactggtgcgcgaactgtcaggagcatcgagaaaggaagggccgtcttgcagataacaacgctaatcggaacaccatcgtcaaccccccaccgatgcaagaaatgagcgtggtcgggaatcatcccagcattacaccagagaatggagcagcatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAEEAGLGHPSRYVQLTRDQDAPADEDIRPGELNLPAHFPQ LEQRRCCECGQQLPESYEAPADEPWTTGICGCAEDTESCWTGSFFPCVLFGHNVEALR EDIPWTTPCTCHAVCVEGGIALAILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIF RQQLQRKYHLKDSPCDPCLVHCCLHWCANCQEHRERKGRLADNNANRNTIVNPPPMQE MSVVGNHPSITPENGAA</aaseq>

Gene Sequence

<dnaseqindica>3020..3214#2339..2604#378..492#114..245#gcagtcgtcgcgctcgtcggcgtcgcgccacctcgccgccgcccaaacaaaatcctcggcgaggaggagaggcgagatcgcgattccgcgagcgctctgctctccgggaggcgatggcggcggcggcggaggaggccggcctcggccacccgtcgaggtacgtgcagctgacgagggaccaggacgcgcccgccgacgaggacatccgccccggcgagctcaacctgccggcccacttcccgcaggtctcgcgccatttccctcgcgcgcgatctcgcgtcgcactcccttcctttccgtggtgccctcgtgttgttgttggtccgatctgacttgttcgaggtggggggctgtgtggtttgcgtgcgtgcgtgtagctggagcagaggaggtgctgcgagtgcgggcagcagctgccggagagctacgaggcgccggcggacgagccgtggaccaccggcatctgcggatgcgccgaggacaccgagagctgtacgtctcgctgccatttctccctcgcactttccatttcctgtgattctataatcctggtagtttacttatcccattccctgatcatgattcgtgcggtcatgcgggttttaatttttaaggaatcgttgagagacaattcgtgtgtcaccatttgctatgtgaatatcggtgtaggtataagatttgattgcaatttatgatatctggattcagagttcatatcgttcatacttttataggagggttggtgactttcagatttaatcaactcctggaaactggaatgggattgcttatgaagcctatttttcataggttagttgcttcagatttatcagaggttaggtccaaaacccccaaatgaaccgctaatttctcagaagactatgctgagacctcaagagtcgggtgggcattcaacttggttatgctaattgatggccatgcataatcacttaatcagggatcactacttctctctagttgattgtcatctgaagtgatggcaaatatgttccagaatgaacctcaattcttatgtgaactttgcatgggtgttcatgatcagttggtctgcattgggcacttctgttggcggcttgcctaattcgccccttccctgttgttttaacaagtaggtggttgagaacctctaataccttacattcctctagtttgttggtttctatgatccgtgcaaaatcagtgcattttgcatagttggtgtggaaagaaattgaccacaagtttgccatgaaagaaaaatgcaaaacttgcctgtaggctgtaccattgaaaggatgcgagttcagagattaccaatcaaagtttgcggtacgatttgaataccatcatttttttacgccatgtttgatgtaatgtaggtttgtgattgatgttgatgtaatgtaggtttgtgattgatgttactttcatgttctcaatatggaagattttttcttaaatatgcatctgaaatatctacactttccctgcataacaatacatttgaaataaatcattgagcagacagatgacaaaaatgtacaaggccaaaagtatgattcatatataattgtaacccgtggtctttggcccagttattttcttttcgccgggccggatgtatattaagaaggagagaaatctttacaaaacatcatgagccgagattggcttaggatacaatcaaccgccgcagcgggagcctataaacacactagagccacaaagggaattctcggcaatctaaccgccatcgatcacgcgcagcagtccagcggccttccatgtttcccaatcgtcagtgatggtggcacagagatgcaccgccgatatggtttttccatcgaacacctgagcattatgttccttccaaactaaccacgttaccaggataactccatcatctcttctgatccgtcttatgaaccgcccagttattttcttgcacgactttcacggggtagtgttgtgtgctcttgattttgtcagtcatatatctttcaatgtactcccttttttattgctcatattggcacgatgaatcatgagagggatcaccgccaaatttatttgttttgtgcagtccatacccaataacagccatttaattaattctaataggtatatattctgtttataccaaaatatgtcatcactccattgtcttcattttgtatgatcacttttttggaggttaatagtttatttgttggagaagagtcgattcttctctttatcatttcaggattgatcttatatcccaatatacttttttttttcactgggaatatacttattccttttttctgcctgaactgcttaccttctctgtttttaggctggactggatcattcttcccttgtgtgctgtttggacataatgttgaggccctaagagaagatatcccatggactacaccttgcacttgccatgctgtttgtgttgaaggtggcattgcattagcaatcctaacagtgatatttcctggtattgatccaagcacatcaatcttgattggtgaaggactggtgtttagttggtggttatttgctacctatactggaatttttcgtcaacaactccagagaaaatatcatctcaaggttttttttaaccctccatgactttccatggttacgtcataccattcaatattacggttaatattatgttcaggataacatcaatcagcaacttttgttttctagaaaatagaaaagaaaatctggatatgaaaggaggggctttcatattgatatgtattaagaagaggatgaatgcgttcgctgggattcgaacgcaggccttcgggcgcaccactgcagacccgacccactgcgcgatggctcagttatcatcctcttctattaacatatcgatatgaaagcctctcctttcatatccagcgttttctagaaaatagctctagcagttatatttatcttttgagatagtcattttactaattaataagctgatttttcacgtcatatgtcatattgtttccttttccaccaggattcaccgtgtgatccttgcctggtccattgctgcctgcactggtgcgcgaactgtcaggagcatcgagaaaggaagggccgtcttgcagataacaacgctaatcggaacaccatcgtcaaccccccaccgatgcaagaaatgagcgtggtcgggaatcatcccagcattacaccagagaatggagcagcatgaacggttgtcagtgagcatgaagctgtgcaggacataccatcataataaaacagtaaagatacaagacaagcataggaatatatgaataacataagaaatgaaactgacctttgtaacccgtgtgccttttaccggagtaggtgttaagagaacgtctctcaaggtatcggcataagtagttccataactggttgaacacttggaacattattagacccatcgtttactaaaagaatgctcttttcatattgggaatgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0560200, RefSeq:Os10g0560200