BGIOSGA030823

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Revision as of 09:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030823| Description = cDNA clone:002-117-F11, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA030823, complete gene.| t...")
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Gene Name

BGIOSGA030823

Description

cDNA clone:002-117-F11, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA030823, complete gene.

LocusTag

OJ1328_D07.6

Ensembl Transcript ID

BGIOSGA030823-TA

Ensembl Protein ID

BGIOSGA030823-PA

Length

3353

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14602340..14605692

Sequence Coding Region

14602340..14602677,14602758..14602961,14603100..14603157,14603276..14603338,14603752..14603802
,14604555..14604630,14604720..14604835,14604932..14605021,14605107..14605238
,14605540..14605692

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14602340..14605692 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14602340..14605692 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGACCGCGGCGGCGCACCTCCTATCCACCCCGCCCTCCGCCTCTCCAGTACACCCCCCTCCCCATGCCCGCATCCTCTGCGCCCACCGGACCAAAGGCGTCGCAACCCTCTCCTGCCGCGCATCGCTTGGCCCCGATGGCTCGCTCGCCGGGCTCGCCGCTGCCGCTGCTGCTGCCCCCAGGGTGGAGCCTCGGGGGAGGCCGTACCTGCGGGAACACTCCTGCCTCATCTTCCCGCCTTCGCCGCGCGGCCGCCGCCCGCTCGCCGTCGTCAAGTTCCTCGGCGGCGCCTTCATCGGCGCCGTCCCCGAGGTCACCTACAGCCATTTCCTGAAGCTCCTGGCGCAGGAGGGCTTCCTGGTGGTGTCCGTGCCGTACAACGTCACCTTCGACCACGAGGCGGCGGCGCGGGAGGTGTACGAGCGGTTCCACGGGTGCTACGGCGCGCTGCTCTCGTCGGGCCTCCCGGCGGCCGGCCTGAGCGCGATGGACATCGCGGAGCTCCCGCTCTACTCGGTCGGCCACAGCAACGGTGCGCTGCTTCAGCTGTTGGTGGGGAGCTACTTCTCGGAGAAGATACCAAAGGCTAATGCCATTGTCTCGTTCAACAATAGGCCCGCTTCAGAGGCTGTTCCATACTTTGAGCAGCTGCAAGGTTATAATTTTGAGAATGGAGAAGAAAATAAGCCCTTCTTGGTTATAGGCCCCCTTTTTAGTCAAGTAATGCCTATGATGGAGGCATCACCTGTTTACTCTGCGGCCAGAAATGCATCAGGAGATGCATGGAAGGCCCTATTTGATTTAGCTGGAGGTTTGATACAGGTGTATGATCAAGAAGCTATGTTATCCCTGAGCAAATTTGTCGACCAGTTACCATCAGTGATGAATCAGGTTACAGAAGGTGTATCTGAATTCAAGCCAACACCACCTGAAAACCGTGAATTCTGCAAGAATTCCTACAATGTACCTAATACACTATTGGTGAAATTCAGCATTGATGCTATTGATGATACAGAGATTGTTGAAGATGTCTTGAAGCCCCGGGTTGAGTCAATTTGTGGACAAATAAAGAAGGTTATACTGTCAGGAACACATCTAACTCCATGCATACAGGCACTAACCAAAACAATACTACAGGATGTGAAATGGCAGGTTGGTTCAGAATACACTCCAGCAGATGCTCTAGCCCAGGGTTTGAAATCATTGGCTCTCAATGAAACTAGGGTCCTCTCAAGAACTATTGCTGATTGGTTTAGATCCCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAATAAAHLLSTPPSASPVHPPPHARILCAHRTKGVATLSCRASLGPDGSLAGLAAAAAAAPRVEPRGRPYLREHSCLIFPPSPRGRRPLAVVKFLGGAFIGAVPEVTYSHFLKLLAQEGFLVVSVPYNVTFDHEAAAREVYERFHGCYGALLSSGLPAAGLSAMDIAELPLYSVGHSNGALLQLLVGSYFSEKIPKANAIVSFNNRPASEAVPYFEQLQGYNFENGEENKPFLVIGPLFSQVMPMMEASPVYSAARNASGDAWKALFDLAGGLIQVYDQEAMLSLSKFVDQLPSVMNQVTEGVSEFKPTPPENREFCKNSYNVPNTLLVKFSIDAIDDTEIVEDVLKPRVESICGQIKKVILSGTHLTPCIQALTKTILQDVKWQVGSEYTPADALAQGLKSLALNETRVLSRTIADWFRSL</aaseq>

Gene Sequence

<dnaseqindica>1..338#419..622#761..818#937..999#1413..1463#2216..2291#2381..2496#2593..2682#2768..2899#3201..3353#ATGGCGGCGGCGGCGGCGACCGCGGCGGCGCACCTCCTATCCACCCCGCCCTCCGCCTCTCCAGTACACCCCCCTCCCCATGCCCGCATCCTCTGCGCCCACCGGACCAAAGGCGTCGCAACCCTCTCCTGCCGCGCATCGCTTGGCCCCGATGGCTCGCTCGCCGGGCTCGCCGCTGCCGCTGCTGCTGCCCCCAGGGTGGAGCCTCGGGGGAGGCCGTACCTGCGGGAACACTCCTGCCTCATCTTCCCGCCTTCGCCGCGCGGCCGCCGCCCGCTCGCCGTCGTCAAGTTCCTCGGCGGCGCCTTCATCGGCGCCGTCCCCGAGGTCACCTACAGGTAACACAAAATCAAACGCGCGCGCGTTCGAATTGAGGGAGAGGAGGGGAAATGGGAGTTCTGATTTCGCGTTGGCGCAGCCATTTCCTGAAGCTCCTGGCGCAGGAGGGCTTCCTGGTGGTGTCCGTGCCGTACAACGTCACCTTCGACCACGAGGCGGCGGCGCGGGAGGTGTACGAGCGGTTCCACGGGTGCTACGGCGCGCTGCTCTCGTCGGGCCTCCCGGCGGCCGGCCTGAGCGCGATGGACATCGCGGAGCTCCCGCTCTACTCGGTCGGCCACAGGTGATCTGAGCTGAGCACGGGGGGTGTTGGATTGGACGCCACCTGTTCGATGTTTTGCCAAGGAGGAAATTTTGAAAAAAATAAAATCTGATCGATGTATGTGACGTTGTCTTTAATTATTTTGTGATGGTTTTGCAGCAACGGTGCGCTGCTTCAGCTGTTGGTGGGGAGCTACTTCTCGGAGAAGATACCAAAGGTTCACATAAATGAGGATACCGAATTCGAATTATTAAAATTTCCATATGATGCTTAGTTGTCTTCGAATTATTAAAATTTCCATATGATGCTTAGTTGTCTGATTCTGATCATTTTAGGCTAATGCCATTGTCTCGTTCAACAATAGGCCCGCTTCAGAGGCTGTTCCATACTTTGAGCAGGTATTTAATGTGCTCTGTAACGTGTTGCATTGCATTGCTCTCACCTTATTATGAACAGGAGTAGCTATTCTGTTCCATACATTACAGTTTCAAACTAATTGAAATAAGAGACATGCTAATTTTGTGAATTAAAGTACTAAACAAGATTTAGTTGAAGAGCTAAACAAAAATCAAGTCTTGATTTGTCAGTATCGCTTTCGTCTTGAGCATTGTGATAGATTCTTTTGTTGGGCTTACATAAGTTTATGGAATCTTTAAAACATTTTTGGCATTTTACAAAAGAAATTGATCAGTGAATATATATTTCTGATAACAGTAGATGACAGGAAACTATTTTTTTTTAAATTAGCTTTATGAATTGGGAGGTACAATCATCTCTCAGCATTAAATGCGTGTGATTGGTGACGACACAGCTGCAAGGTTATAATTTTGAGAATGGAGAAGAAAATAAGCCCTTCTTGGTTGTAAGTTGTAACTACATAGCAAAAAAAAGGGTTTTGGCTAAAGGTTATTTAATAGCTTCTCCCTCATTTATTGCTTGTGCGTGACTAAGATAGATTTAACAAGTTTAGATGGTGAAATATAGAATCATCTAATGGTGGCGCTAATTGTCCTGGTTATGATCAAGCCTTGCAGATTGATTTTGTAAGACAAAATGTGTATGTGTAGAACATGCTCATGTCTTTGACCCCATGCCTTCCTTTGTACCTTGCATACCAATGCCTTGCTTTGTACTGAACATGTAGACCACCACCTTCACCGAGCCCACATAATCCATTGTCATTGTATGGAGAATGCACCTGGTTTGATGGTAAGCTGCAATGATTACTCTACCATGCCTTTGCTTGGGACAGAGCTTTTCTCTTGAAAAGGAGTTCAGATGGAGCTCAAAACTCTTAATTTTACTAAAGTTAGTTCTGCACTGCATTGTGTGGTGACAGTACGCTAGTGCATTTCGAAGTCCAAAAGGTACAAATTTGAACCTAGCAGCTTCTTGCATAACCTGTCTAAAATTTGTTAACAATGAATAATAAGCAATTCCTTAAAAAGAAAGAGCGAAGTGTCAAGAAAATATGTGCAATGCTTTGTTGATGTACTTCATCTCCAACACACATTTTGCGCTTAGAGCTGATTTCAGTCTAAAATGTTACTACATATTCCTGCTTCCTGGATTTTTGTGGTTATTATCTACCTTAGAAGTGATCTTTTAGTGCAGATAGGCCCCCTTTTTAGTCAAGTAATGCCTATGATGGAGGCATCACCTGTTTACTCTGCGGCCAGAAATGCATCAGGTTACTGTTCATTTTGGTTGTCCCTTCTTAAGATTTATCAAAATGCTTCATGGACTTTTATAGTAAGATGCGGTGTCATGGTTTTGTAGGAGATGCATGGAAGGCCCTATTTGATTTAGCTGGAGGTTTGATACAGGTGTATGATCAAGAAGCTATGTTATCCCTGAGCAAATTTGTCGACCAGTTACCATCAGTGATGAATCAGGTACTATATAAATCTAAGTTCTTTCATTTTATAACAACGCTTTCATAAAATGTTTAGCTTAGTTCTGCCCATATCTGTTTCCTATGTTATTGACAGGTTACAGAAGGTGTATCTGAATTCAAGCCAACACCACCTGAAAACCGTGAATTCTGCAAGAATTCCTACAATGTACCTAATACACTATTGGTAGGTTTGATGAACTTCTTTTCACTTTGGTAAACCTCTCTCTACTCTAATCAGTGTATATTAATACTTGATGCATGCACTGTAGGTGAAATTCAGCATTGATGCTATTGATGATACAGAGATTGTTGAAGATGTCTTGAAGCCCCGGGTTGAGTCAATTTGTGGACAAATAAAGAAGGTTATACTGTCAGGAACACATCTAACTCCATGCATACAGGTAAAATTTGCTATATCTTCCTCTCAAATTGTATGATGCTTCAGGTGCAGGCAGAGAGTTATACAAACTCATCTATATTTTTGTAGCACTAAATGTGTTATTGTTAGGGGCAATTCACCACCAATTCTCATGCATATTCAAGAAAAAATCACCACCAATAGCAAGCAAATTTTTACGGTCATTCCTGACCAGCTGGCAACTTGGCATTCTCAAAATAACTTGATCGTAGCAAAAACAACTTATTTATTTGTTCTTATAGTCATTATCATTTCTCTATGCATTATTTGTGTCCATGTCTCAGGCACTAACCAAAACAATACTACAGGATGTGAAATGGCAGGTTGGTTCAGAATACACTCCAGCAGATGCTCTAGCCCAGGGTTTGAAATCATTGGCTCTCAATGAAACTAGGGTCCTCTCAAGAACTATTGCTGATTGGTTTAGATCCCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030823

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030823&oldid=30027"