BGIOSGA030830

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Revision as of 09:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030830| Description = BGIOSGA030830| Definition = Oryza sativa Indica Group BGIOSGA030830, complete gene.| tag = | tid = BGIOSGA030830-TA|...")
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Gene Name

BGIOSGA030830

Description

BGIOSGA030830

Definition

Oryza sativa Indica Group BGIOSGA030830, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA030830-TA

Ensembl Protein ID

BGIOSGA030830-PA

Length

3178

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14727635..14730812

Sequence Coding Region

14727635..14727728,14727845..14728078,14728229..14728322,14728472..14728686,14728890..14729023
,14729128..14729632,14729680..14729857,14729957..14730812

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14727635..14730812 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14727635..14730812 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGCACCACTCCCTCGAGGTGGCCGCCGCAGGAGGCGACGGCGGCGGCGGCCGATGCTACGACGACGACGGCCACCCGGCACGCACCGGGACGGTGTGGACGTGCGTGGCGCACATCATCACGGCGGTGATCGGGTCCGGGGTGCTGTCGCTGGCGTGGAGCGTGGCGAAGCTGGGGTGGGTGGGGGGACCGGCCTGCATGGCCTGCTTCGCGCTCGTCACCTACGTCTCCGCCGCGCTGCTCTCCGACTGCTACCGCCGCGGCGACGACGACAAGGGCCCCCGGAGCCGATCCTACATGGACGCCGTCCGCGCCTTCCTCGGCAAGAAGCACACCTGGGCCTGCGGCTTGCTCCAGTACGCGAGCCTGTACGGCTGCGGCGTCGCGTATACCATCACCACCGCCACTAGCATGAGGGCGATCCTGAGGTCCAACTGCTACCACACGCACGGCCACGACGCGCCCTGCAAATACGGGGGTAGCTACTACATGCTCATGTTCGGCGCGGCGCAGCTGTTCCTCTCCTTCATACCGGACTTCCACGACATGGCGTGGCTGTCGGTCCTCGCCGCGGTCATGTCGTTCTCCTACTCGTTCATCGGCCTCGGCCTCGGCCTCGCCAACACAATTGCTAATGGAACGATCAAAGGAAGCATAACAGGTGCTCCAACGAGAACCCCTGTGCAGAAGGTCTGGCACGTCTCGCAGGCCATCGGCGACATCGCATTCGCGTACCCGTACTCATTAATCCTCTTGGAAATTCAGGACACACTGAAGGCTCCACCGGCCGAGAACAAGACGATGAAGAAGGCGTCCATCATCTCGATCGTCGTCACCACCTTCTTCTACCTCTGCTGCGGCTGCTTCGGCTACCCGCCTTCGGGAGCGACGCCCTGGCAACCTCCTCACCGGCTTCGGCTTCTACGAGCCCTACTGGCTCATCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGCGCCCACTCGCCGGCGCGGCAGCGCGCGCGCGCGCGCGCGGGCGGTCGCGAGGCCGCGAGCCTATTTATAACACGCGGCGCGGCCGTGTGAGCGCCGCACGCACGCAGCAGCAGCGGAATCTCGACGGCGGCGACATCATGGGGCGGGTGCCGTGCTGCGAAAAGGACAACGTGAAGCGCGGGCAGTGGACGCCCGAGGAGGACAACAAGCTGCTCTCCTACATCACCCAGTACGGCACCCGCAACTGGCGCCTCATCCCCAAGAACGCCGCACGCGTGCGGCGCTCTGACCGGGGTGTTTGTTGCTGGAACGTTGGCAGGTTGCAGCGGTGCGGGAAGAGCTGCCGGCTGCGGTGGACCAACTACCTCCGGCCCGACCTCAAGCACGGCGAGTTCACCGACGCCGAGGAGCAGACCATCATCAAGCTCCACTCCGTCGTCGGCAACAGGTGGTCGGTGATCGCGGCGCAGCTTCCGGGGCGGACGGACAACGACGTGAAGAACCACTGGAACACGAAGCTGAAGAAGAAGCTGTCCGGGATGGGCATCGACCCCGTCACGCACAAGTCCTTCTCGCACCTCATGGCCGAGATCGCCACCACGCTGGCGCCGCCGCAGGTGGCGCACCTCGCCGAGGCCGCGCTGGGGTGCTTCAAGGACGAGATGCTCCACCTCCTCACCAAGAAGCGCCCCTCCGACTTCCCCTCGCCCGCCGTGCACGACGGCGCCGGCGCCGGCGCCAGCGCGTCCGCGCTCGCCGCGCCCTGTTTCCCCGCCGCGCCGCCGCACCACCCGCAGGCCGACGACACCATCGAGCGCATCAAGCTCGGCCTGTCCCGCGCCATCATGAGCGATCCCTCCACCGCCTCCGCCGCCGCCGCCGCCGCCGCGCCCTCCGCCCCCGCGGAGGACAAGCCGTGGCCGCCCGGCGACATGTCCGAGGGGCTCGCCGGGATGTACGCCACGTACAACCCGGCGGCGCACGCGCACGCGCAGGCCCAGGCCGAGTTCCGGTACGACGGGGCCTCCGCGGCGCAGGGCTACGTCCTCGGCGGCGACGGCGACCAGGGCACGTCGATGTGGAGCCACCAGAGCCTGTACAGCGGGAGCTCCGGCACCGAGGAGGCCAGGCGGGCGTTGCCGGAGAAGGGCAACGACAGCGTCGGCAGCAGCGGCGGCGACGACGACGCCGCGGACGACGGCAAGGACAGCGGGAAGGGGGCAGCCTCCGACATGTCGGGCCTGTTCGCCTCCGACTGCGTGCTCTGGGACTTGCCCGACGAGCTCACGAATCACATGGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAVHHSLEVAAAGGDGGGGRCYDDDGHPARTGTVWTCVAHIITAVIGSGVLSLAWSVAKLGWVGGPACMACFALVTYVSAALLSDCYRRGDDDKGPRSRSYMDAVRAFLGKKHTWACGLLQYASLYGCGVAYTITTATSMRAILRSNCYHTHGHDAPCKYGGSYYMLMFGAAQLFLSFIPDFHDMAWLSVLAAVMSFSYSFIGLGLGLANTIANGTIKGSITGAPTRTPVQKVWHVSQAIGDIAFAYPYSLILLEIQDTLKAPPAENKTMKKASIISIVVTTFFYLCCGCFGYPPSGATPWQPPHRLRLLRALLAHRXXXXXXXXXXXXXXXXXARPLAGAAARARARGRSRGREPIYNTRRGRVSAARTQQQRNLDGGDIMGRVPCCEKDNVKRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAARVRRSDRGVCCWNVGRLQRCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKSFSHLMAEIATTLAPPQVAHLAEAALGCFKDEMLHLLTKKRPSDFPSPAVHDGAGAGASASALAAPCFPAAPPHHPQADDTIERIKLGLSRAIMSDPSTASAAAAAAAPSAPAEDKPWPPGDMSEGLAGMYATYNPAAHAHAQAQAEFRYDGASAAQGYVLGGDGDQGTSMWSHQSLYSGSSGTEEARRALPEKGNDSVGSSGGDDDAADDGKDSGKGAASDMSGLFASDCVLWDLPDELTNHMV</aaseq>

Gene Sequence

<dnaseqindica>1..94#211..444#595..688#838..1052#1256..1389#1494..1998#2046..2223#2323..3178#ATGGCGGTGCACCACTCCCTCGAGGTGGCCGCCGCAGGAGGCGACGGCGGCGGCGGCCGATGCTACGACGACGACGGCCACCCGGCACGCACCGGTACGGTACACACACGCTCGTTGTACGTCGTACGTCGTTGTTCCCTGAACCCAGCGCGCTGATCTGAATCCATCCATGCGCGCGCGGGGCGAATGGTGTGGCGGGCGTGCGTGCAGGGACGGTGTGGACGTGCGTGGCGCACATCATCACGGCGGTGATCGGGTCCGGGGTGCTGTCGCTGGCGTGGAGCGTGGCGAAGCTGGGGTGGGTGGGGGGACCGGCCTGCATGGCCTGCTTCGCGCTCGTCACCTACGTCTCCGCCGCGCTGCTCTCCGACTGCTACCGCCGCGGCGACGACGACAAGGGCCCCCGGAGCCGATCCTACATGGACGCCGTCCGCGCCTTCCTCGGTAACCAACACACAACACACAAAATCAAAAGCTAGCTAGCGATTTACGACGACGCAAACCAAACCGAACTTCGCGTTAGCGAATTCGTGGCTAAATTCTGTATACTCTGTCTCTGTGTGTGCACATGGCGCGGCGAATTAACGTGCTCAGGCAAGAAGCACACCTGGGCCTGCGGCTTGCTCCAGTACGCGAGCCTGTACGGCTGCGGCGTCGCGTATACCATCACCACCGCCACTAGCATGAGGTAGTAGCAGCTAGCCCAAGAATCGATGTGCAGGGAGAAACGTGATGGATGATGCATTATGAGTTTTGCAGCGTGGTGTTTCTGTTTCTGTTTCTGTTTCTGTTTCTTCCGTTGATTTTTTTCTTCGGGTTTTGGTGTGTTTTTTGCAGGGCGATCCTGAGGTCCAACTGCTACCACACGCACGGCCACGACGCGCCCTGCAAATACGGGGGTAGCTACTACATGCTCATGTTCGGCGCGGCGCAGCTGTTCCTCTCCTTCATACCGGACTTCCACGACATGGCGTGGCTGTCGGTCCTCGCCGCGGTCATGTCGTTCTCCTACTCGTTCATCGGCCTCGGCCTCGGCCTCGCCAACACAATTGGTACTCTTTGCTTTGGTTTCAGAATCCAATCTGTTCATCCTTTGAGGCTTTGAGCTGCTCAGTCGTAGTACTAGTGCATTTACATGTTCTGTGAGACTAGATGGTCTGATAAATTGGTTCTGAACGATGCGCACTGCAACTAAACATGTAGTATGTGAACATTGAGATTATGTAAAGTTGACAAACCTGTTGCTGTTCTTCAGCTAATGGAACGATCAAAGGAAGCATAACAGGTGCTCCAACGAGAACCCCTGTGCAGAAGGTCTGGCACGTCTCGCAGGCCATCGGCGACATCGCATTCGCGTACCCGTACTCATTAATCCTCTTGGAAATTCAGGTGCACACATAGGAGTACATCTCATCGATCTGAAAGTCTGAAGCCTGAAGTACAACAGTACAGTCGCTGACGAATTTCTTCCGTTACGGTCTGTGTTTGTGCAGGACACACTGAAGGCTCCACCGGCCGAGAACAAGACGATGAAGAAGGCGTCCATCATCTCGATCGTCGTCACCACCTTCTTCTACCTCTGCTGCGGCTGCTTCGGCTACCCGCCTTCGGGAGCGACGCCCTGGCAACCTCCTCACCGGCTTCGGCTTCTACGAGCCCTACTGGCTCATCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGCGCCCACTCGCCGGCGCGGCAGCGCGCGCGCGCGCGCGCGGGCGGTCGCGAGGCCGCGAGCCTATTTATAACACGCGGCGCGGCCGTGTGAGCGCCGCACGCACGCAGCAGCAGCGGAATCTCGACGGCGGCGACATCATGGGGCGGGTGCCGTGCTGCGAAAAGGACAACGTGAAGCGCGGGCAGTGGACGCCCGAGGAGGACAACAAGCTGCTCTCCTACATCACCCAGTACGGCACCCGCAACTGGCGCCTCATCCCCAAGAACGCCGGTACGTTGGCTGCTGCGCTGCCGCCACCGGCGAACGCGTGGTTGCAGCACGCGTGCGGCGCTCTGACCGGGGTGTTTGTTGCTGGAACGTTGGCAGGTTGCAGCGGTGCGGGAAGAGCTGCCGGCTGCGGTGGACCAACTACCTCCGGCCCGACCTCAAGCACGGCGAGTTCACCGACGCCGAGGAGCAGACCATCATCAAGCTCCACTCCGTCGTCGGCAACAGGTAGGCATCAACGAGTGGTCTCGCTACACCGTCTTGTGATCTTGGGTCATTTTTGGAGGAATGTATTGAGCAATGCGGGATGGGGCTGTGTGTGGCAAGGTGGTCGGTGATCGCGGCGCAGCTTCCGGGGCGGACGGACAACGACGTGAAGAACCACTGGAACACGAAGCTGAAGAAGAAGCTGTCCGGGATGGGCATCGACCCCGTCACGCACAAGTCCTTCTCGCACCTCATGGCCGAGATCGCCACCACGCTGGCGCCGCCGCAGGTGGCGCACCTCGCCGAGGCCGCGCTGGGGTGCTTCAAGGACGAGATGCTCCACCTCCTCACCAAGAAGCGCCCCTCCGACTTCCCCTCGCCCGCCGTGCACGACGGCGCCGGCGCCGGCGCCAGCGCGTCCGCGCTCGCCGCGCCCTGTTTCCCCGCCGCGCCGCCGCACCACCCGCAGGCCGACGACACCATCGAGCGCATCAAGCTCGGCCTGTCCCGCGCCATCATGAGCGATCCCTCCACCGCCTCCGCCGCCGCCGCCGCCGCCGCGCCCTCCGCCCCCGCGGAGGACAAGCCGTGGCCGCCCGGCGACATGTCCGAGGGGCTCGCCGGGATGTACGCCACGTACAACCCGGCGGCGCACGCGCACGCGCAGGCCCAGGCCGAGTTCCGGTACGACGGGGCCTCCGCGGCGCAGGGCTACGTCCTCGGCGGCGACGGCGACCAGGGCACGTCGATGTGGAGCCACCAGAGCCTGTACAGCGGGAGCTCCGGCACCGAGGAGGCCAGGCGGGCGTTGCCGGAGAAGGGCAACGACAGCGTCGGCAGCAGCGGCGGCGACGACGACGCCGCGGACGACGGCAAGGACAGCGGGAAGGGGGCAGCCTCCGACATGTCGGGCCTGTTCGCCTCCGACTGCGTGCTCTGGGACTTGCCCGACGAGCTCACGAATCACATGGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030830

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030830&oldid=30034"