BGIOSGA030844

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Revision as of 09:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030844| Description = Oryzain gamma chain| Definition = Oryza sativa Indica Group BGIOSGA030844, complete gene.| tag = OS09G0442300| tid =...")
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Gene Name

BGIOSGA030844

Description

Oryzain gamma chain

Definition

Oryza sativa Indica Group BGIOSGA030844, complete gene.

LocusTag

OS09G0442300

Ensembl Transcript ID

BGIOSGA030844-TA

Ensembl Protein ID

BGIOSGA030844-PA

Length

4024

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14953673..14957696

Sequence Coding Region

14953673..14953878,14953992..14954113,14954189..14954307,14955006..14955079,14956803..14957067
,14957160..14957291,14957415..14957550,14957659..14957696

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14953673..14957696 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14953673..14957696 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCACCGCCGCATCATCCTCCTCCTCCTCGCCGCCGCCGCCGTCGCCGCGACCTCCGCCGTCGCCGCCGCGTCCTCCGGCTTCGACGACTCCAACCCGATCCGCTCCGTCACGGACCAGGCCGCCTCCGCGCTCGAGTCAACCGTCATCGCCGCCCTCGGCCGCACCCGCGACGCCCTCCGCTTCGCCCGCTTCGCCGTCAGGCATGGGAAGAGGTACGGCGACGCGGCAGAGGTGCAGCGGCGGTTCCGGATCTTCTCCGAGAGCCTCGAGCTCGTCCGCTCCACCAACCGGAGGGGCCTCCCCTACCGCCTCGGCATCAACCGTTTCGCGGACATGAGCTGGGAGGAGTTCCAGGCGAGCCGGCTCGGCGCGGCGCAGAACTGCTCGGCGACGCTCGCCGGCAACCACCGGATGCGCGACGCCGCCGCTCTCCCGGAGACCAAAGACTGGAGGGAGGATGGGATCGTGAGCCCCGTGAAAGACCAGGGTCACTGTGGTTCCTGTTGGACCTTCAGCACCACTGGTTCTCTTGAGGCAGCATATACTCAGGCCACTGGGAAGCCTGTCTCTCTTTCTGAGCAGCAGCTGGTTGATTGTGCTACTGCATACAATAATTTCGGATGCAGTGGAGGCCTACCATCTCAGGCCTTTGAGTACATCAAATACAATGGTGGCCTTGACACTGAAGAGGCTTACCCTTACACGGGTGTCAATGGCATCTGTCATTACAAGCCTGAAAACGTTGGAGTCAAGGTTTTGGACTCCGTTAACATCACCCTGGGTGCTGAGGATGAGCTGAAGAATGCTGTTGGACTTGTTCGTCCAGTTAGTGTTGCCTTTCAGGTGATCAACGGTTTCAGGATGTACAAGAGTGGAGTTTACACAAGTGACCATTGTGGAACTTCTCCAATGGATGTGAACCACGCTGTTCTGGCCGTTGGCTATGGTGTCGAAAATGGCGTTCCCTACTGGCTCATCAAGAACTCATGGGGTGCAGACTGGGGTGACAATGGTTACTTCAAGATGGAAATGGGCAAGAACATGTGCGGTATTGCTACTTGCGCATCCTACCCTATTGTTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MAHRRIILLLLAAAAVAATSAVAAASSGFDDSNPIRSVTDQAASALESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA</aaseq>

Gene Sequence

<dnaseqindica>1..206#320..441#517..635#1334..1407#3131..3395#3488..3619#3743..3878#3987..4024#ATGGCCCACCGCCGCATCATCCTCCTCCTCCTCGCCGCCGCCGCCGTCGCCGCGACCTCCGCCGTCGCCGCCGCGTCCTCCGGCTTCGACGACTCCAACCCGATCCGCTCCGTCACGGACCAGGCCGCCTCCGCGCTCGAGTCAACCGTCATCGCCGCCCTCGGCCGCACCCGCGACGCCCTCCGCTTCGCCCGCTTCGCCGTCAGGTCGGCGCCGCCCCCCCCGTTCGGTTCCCCCTAATCCCACCCCACCGCCGCCGCCGCGGCCATTCGTCTTCCTTGTCGTCCTGACCTCTCGTACGATCTCGTCCTACGCGCAGGCATGGGAAGAGGTACGGCGACGCGGCAGAGGTGCAGCGGCGGTTCCGGATCTTCTCCGAGAGCCTCGAGCTCGTCCGCTCCACCAACCGGAGGGGCCTCCCCTACCGCCTCGGCATCAACCGTAGGACCTCGAGCCGAGCGCCTCCTAATCCTCCTAATCCTCCTCTCACACACCCCCGTCGCGGTGCTTTTGCAGGTTTCGCGGACATGAGCTGGGAGGAGTTCCAGGCGAGCCGGCTCGGCGCGGCGCAGAACTGCTCGGCGACGCTCGCCGGCAACCACCGGATGCGCGACGCCGCCGCTCTCCCGGAGACCGTAAGTGCCAAAGCTCTGTACTGTAGTAACGTGGTAGTAACGGTAGGTAGCCACACACACACACATGTGGGAATTGCTTCTTGGGGAATTCTTGCATCATCCGCCATGCGTGAGCTGGGGATCAGGCTCGGAGAGGGTTTTAATTTCTGATCTGAACTCTGGGCTTTGCAAGGAGCAGCAAGATTTGCTTTGCTCATCGCTGCAGCGTTCGCTCGATTCGATTGGCTGTCCCTACCACGTGTTACTGTGTCCTCGCGGTCGCGGCTTCTATACCCCGTAAAGAACATTTTTTAATGACCACTTAATTTCTTCTGTGACCTCTGCACATGATGTAGTTACTGATACGAACAACGAGCCTGCTATGCCTGGTTAGTTTTCTGAAAAATAGAAATCATCCATCTTTTTTTATGAGGGGTTGAACTGTAGTGTACAGCATTTCTGCCCGTATTTGTAGGTGCGATTGTGAGTTGTGAGAGTATGGCATTCATACTCGCAAGACTGTGGTCCTTGCATGCTTATTGTGTCGCTTGATCCGGCCATACAGTGTGTCGTTACATGCTTATTGGGTCGCTTGATCAGGCCATACACTGTGTGTCTGTGTCCTTGCATGCTAATCGGTCCCATCAGGTTATGCATTTTGTACGTTTTAGCACTGAATTTTGGGGGACTTTTTTTCCTGATTGTTTTAGTTACTGCAGAAAGACTGGAGGGAGGATGGGATCGTGAGCCCCGTGAAAGACCAGGGTCACTGTGGTTCCTGTTGGACCTTCAGGTAACTACTTTCTGGTGCAAACTGTGTGAGTATTTTTCTAGATGCAAACTGTAGTAGTAATTTGAGAAATTTTGGTCCTTAAGGTACCTAAATTTTACACTAATTTTTTTTTACCCCGAGGTATTTACTAACTTAAAGATACCAAATTTTATACTACAAAGTGTGATATACTGATATCTACTACTCCCTCCGTCCCACAATATAAGGGATTTTGAGTTTTTGTTTGTAACGTTTGACCACTCGTCTTATTCAATTTTTTTTTTGCAAATATAAAAAACGAAAAGTTGTGCTTAAAATACTGGAGATAATAAAGTAAGTCACAAATAAAATAAATAATAATTTCAAAAAATTGTGAATGAGACGAGTGATCAAACGTTGCAAGGAAAACCTCAAAATCCCTTATATTATGGGACGGAGGGAGTAGTATTTTTTTAAGGATGATAAAATTACTTAGTACTATCTTTTGAGGTGCAACATGTATTGGTAATCCTGTTGTGCTAATAACAATAGAATCCATCGAACGAAAAAGAAAGAATCCGTGCTATTTTTCTAAATATCTTCCCTGAACTACTGAACCTATAAAAAAAGTTACGGCAAAGTGTGCTAACAAACGGGGGTTGCTTTGATAATTATTGAACTGAACTTTCGAAATTACGTGTAAAAGGCTATCTTACCAGACAGGAAGTACCAGTTGGAGTCTGCTTGTCTGGCGTCAGGACTCGCAAGCTCTGATTCAATCATGGTCTTGAAAGTAATCGGGGTGGATGCACTTTCCAATTGTGCTGCTTTTTGGTAAATAGTTTTAAACTACGTTGAATGGGTACTGGCAGATCAGTATGTCGGTTAAGCTGGAGATTGCTAGCTCTCGAGTACAGTAGGTGAGAACTGGAGAACTTTCACCACAGAAACGATTACAAAAATATTTGAAAATGTTAAGCATGGGACTTAAACTATTGCACTCGTGTGACATGCGAGTAATAAAATAATGGAGAAGCTGACATTATTATCTAACTAGGGTGTGTTCGCTATTAGAGGTTCCCAACCAGGAGCGGTCCACGCGGAAAATGGAGCGGTCCATTAGCGCGTGATTAATTAAGTATTAGCTATTTTTTTAAAAAAAAATAGATCAATATGATTTTTTTAAGCAACTTTTGTATAGAAACTTTTTGTAAAAAAACACACCATTTAGTAGTTTAAAAAGCGTGCGAGCAGAAAACGAGAGGGGAAAGTTGGAACCGGCAGTAGTGACGAACACCCCTCTAGTGCTGCTTGCATAATCTGTTTCGGTTGCTGATAATGGAGCCTTTCATATCTCCTGTCTATTTGACTTGTACTTCCTCCGTCCCAAAAATAGGTGTCCAGATTTATCGTTAGAATTGGACTTTTGACGGAGGGGTATCTGTCACTACTCTCAAATAAGCATACAATTCAATTATCATATGTCTTTCATGAATTTATTCTGATACTTTTCGTCCATTTGGCATATATTCTTGCTACTCCACAAGTATAGTGGCAAATATGCTTCACATACCAATTGACAAACCTATGTTGAAAATGTTCCTGGAATGTTACTTTCGATTATAACTTTATATAGTGTGACCGTTGTAGAAAAGGTGCCTCATTTCAATTATAGCAGACAAAGTAGAAAAAAGGAAAGTCACGGGTGGGGGGGGGGGGGTCCTATAATCAGATCATTTGAGTGACCTTTAACTTATTCTGGCAGCACCACTGGTTCTCTTGAGGCAGCATATACTCAGGCCACTGGGAAGCCTGTCTCTCTTTCTGAGCAGCAGCTGGTTGATTGTGCTACTGCATACAATAATTTCGGATGCAGTGGAGGCCTACCATCTCAGGCCTTTGAGTACATCAAATACAATGGTGGCCTTGACACTGAAGAGGCTTACCCTTACACGGGTGTCAATGGCATCTGTCATTACAAGCCTGAAAACGTTGGAGTCAAGGTTTTGGACTCCGTTAACATCACCCTGGTAAGGAACCCCGTTGTAAAGTTTGATGGGAGCATCTAGAATATACTGTTCTGATTTATTGATCCTCTTTTTTTGGTTATTGCTCTGGTAAGGGTGCTGAGGATGAGCTGAAGAATGCTGTTGGACTTGTTCGTCCAGTTAGTGTTGCCTTTCAGGTGATCAACGGTTTCAGGATGTACAAGAGTGGAGTTTACACAAGTGACCATTGTGGAACTTCTCCAATGGTGAGTGTACAAGAGATCTAGCTCATTTTTCAGTATATGATTTGATTTGTTTGTGTAGAGTTTTTCTTTGTATGATTACTGTCCAATTATACCCTGAATTGTGAGTTCGAATGCTATTACTAGGATGTGAACCACGCTGTTCTGGCCGTTGGCTATGGTGTCGAAAATGGCGTTCCCTACTGGCTCATCAAGAACTCATGGGGTGCAGACTGGGGTGACAATGGTTACTTCAAGATGGAAATGGGCAAGAACATGTGCGGTAAGTTTTCCATATTGACGTCCATGGCTACGATGAACTGATATCGCATTTGTTACGCTGGATATATTGCACTGCATCACAATATTGACTTGAATATAAATTATGCAGGTATTGCTACTTGCGCATCCTACCCTATTGTTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030844